RNA–Protein interactions for RNA: ENST00000438067.5

PTCH2-202, Transcript of patched 2, humanhuman

TSL 3

Gene PTCH2, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-202ENST00000438067 ALAS1P13196 640 aa20.55■□□□□ 0.88
PTCH2-202ENST00000438067 RCSD1Q6JBY9 416 aa20.55■□□□□ 0.88
PTCH2-202ENST00000438067 PSRC1Q6PGN9 363 aaPredicted RBP20.55■□□□□ 0.88
PTCH2-202ENST00000438067 CCDC129Q6ZRS4 1044 aa20.55■□□□□ 0.88
PTCH2-202ENST00000438067 KCTD1Q719H9 257 aa20.55■□□□□ 0.88
PTCH2-202ENST00000438067 FSD1Q9BTV5 496 aa20.55■□□□□ 0.88
PTCH2-202ENST00000438067 INCENPQ9NQS7 918 aa20.55■□□□□ 0.88
PTCH2-202ENST00000438067 IL17RBQ9NRM6 502 aa20.55■□□□□ 0.88
PTCH2-202ENST00000438067 DDX49Q9Y6V7 483 aaKnown RBP20.55■□□□□ 0.88
PTCH2-202ENST00000438067 CHD9Q3L8U1 2897 aa20.55■□□□□ 0.88
PTCH2-202ENST00000438067 DYNC1LI2O43237 492 aaPredicted RBP20.54■□□□□ 0.88
PTCH2-202ENST00000438067 CABYRO75952 493 aa20.54■□□□□ 0.88
PTCH2-202ENST00000438067 SMPD1P17405 629 aa20.54■□□□□ 0.88
PTCH2-202ENST00000438067 SNAP25P60880 206 aa20.54■□□□□ 0.88
PTCH2-202ENST00000438067 FSCN1Q16658 493 aaKnown RBP20.54■□□□□ 0.88
PTCH2-202ENST00000438067 PPP4R3BQ5MIZ7 849 aa20.54■□□□□ 0.88
PTCH2-202ENST00000438067 TLK2Q86UE8 772 aa20.54■□□□□ 0.88
PTCH2-202ENST00000438067 OTUD7AQ8TE49 926 aaPredicted RBP20.54■□□□□ 0.88
PTCH2-202ENST00000438067 AP5M1Q9H0R1 490 aa20.54■□□□□ 0.88
PTCH2-202ENST00000438067 IL23AQ9NPF7 189 aa20.54■□□□□ 0.88
PTCH2-202ENST00000438067 PDGFCQ9NRA1 345 aa20.54■□□□□ 0.88
PTCH2-202ENST00000438067 PRR12Q9ULL5 1215 aa20.54■□□□□ 0.88
PTCH2-202ENST00000438067 STX8Q9UNK0 236 aa20.54■□□□□ 0.88
PTCH2-202ENST00000438067 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.54■□□□□ 0.88
PTCH2-202ENST00000438067 GRIN2DO15399 1336 aa20.53■□□□□ 0.88
PTCH2-202ENST00000438067 TSPY2A6NKD2 308 aa20.53■□□□□ 0.88
PTCH2-202ENST00000438067 FOXP2O15409 715 aa20.53■□□□□ 0.88
PTCH2-202ENST00000438067 NMT2O60551 498 aa20.53■□□□□ 0.88
PTCH2-202ENST00000438067 PTGS1P23219 599 aa20.53■□□□□ 0.88
PTCH2-202ENST00000438067 ITGA7Q13683 1181 aa20.53■□□□□ 0.88
PTCH2-202ENST00000438067 MUM1L1Q5H9M0 696 aa20.53■□□□□ 0.88
PTCH2-202ENST00000438067 IQSEC1Q6DN90 963 aa20.53■□□□□ 0.88
PTCH2-202ENST00000438067 TAPT1Q6NXT6 567 aa20.53■□□□□ 0.88
PTCH2-202ENST00000438067 HERVK_113Q902F9 699 aa20.53■□□□□ 0.88
PTCH2-202ENST00000438067 HIPK3Q9H422 1215 aa20.53■□□□□ 0.88
PTCH2-202ENST00000438067 CYP39A1Q9NYL5 469 aa20.53■□□□□ 0.88
PTCH2-202ENST00000438067 MYH4Q9Y623 1939 aa20.53■□□□□ 0.88
PTCH2-202ENST00000438067 CTDSPL2Q05D32 466 aa20.52■□□□□ 0.88
PTCH2-202ENST00000438067 EEPD1Q7L9B9 569 aa20.52■□□□□ 0.88
PTCH2-202ENST00000438067 GAS2L1Q99501 681 aaPredicted RBP20.52■□□□□ 0.88
PTCH2-202ENST00000438067 PRDM12Q9H4Q4 367 aa20.52■□□□□ 0.88
PTCH2-202ENST00000438067 PRDM6Q9NQX0 595 aa20.52■□□□□ 0.88
PTCH2-202ENST00000438067 CXXC1Q9P0U4 656 aaPredicted RBP20.52■□□□□ 0.88
PTCH2-202ENST00000438067 PCDHB15Q9Y5E8 787 aa20.52■□□□□ 0.88
PTCH2-202ENST00000438067 ZEB2O60315 1214 aa20.51■□□□□ 0.87
PTCH2-202ENST00000438067 FGBP02675 491 aa20.51■□□□□ 0.87
PTCH2-202ENST00000438067 TJAP1Q5JTD0 557 aa20.51■□□□□ 0.87
PTCH2-202ENST00000438067 TMEM63BQ5T3F8 832 aa20.51■□□□□ 0.87
PTCH2-202ENST00000438067 RASGRP2Q7LDG7 609 aa20.51■□□□□ 0.87
PTCH2-202ENST00000438067 SEZ6LQ9BYH1 1024 aa20.51■□□□□ 0.87
PTCH2-202ENST00000438067 TRPV6Q9H1D0 765 aa20.51■□□□□ 0.87
PTCH2-202ENST00000438067 Q9Y3F1 56 aa20.51■□□□□ 0.87
PTCH2-202ENST00000438067 MCM3APO60318 1980 aa20.51■□□□□ 0.87
PTCH2-202ENST00000438067 UMODL1Q5DID0 1318 aa20.51■□□□□ 0.87
PTCH2-202ENST00000438067 NOVP48745 357 aa20.5■□□□□ 0.87
PTCH2-202ENST00000438067 NSMFQ6X4W1 530 aa20.5■□□□□ 0.87
PTCH2-202ENST00000438067 FBXO16Q8IX29 292 aaPredicted RBP20.5■□□□□ 0.87
PTCH2-202ENST00000438067 PURBQ96QR8 312 aaKnown RBP20.5■□□□□ 0.87
PTCH2-202ENST00000438067 MSRAQ9UJ68 235 aa20.5■□□□□ 0.87
PTCH2-202ENST00000438067 CCPG1Q9ULG6 757 aa20.5■□□□□ 0.87
PTCH2-202ENST00000438067 MTMR7Q9Y216 660 aa20.5■□□□□ 0.87
PTCH2-202ENST00000438067 RANBP6O60518 1105 aaKnown RBP20.49■□□□□ 0.87
PTCH2-202ENST00000438067 ICAM1P05362 532 aa20.49■□□□□ 0.87
PTCH2-202ENST00000438067 MX1P20591 662 aa20.49■□□□□ 0.87
PTCH2-202ENST00000438067 CCL23P55773 120 aa20.49■□□□□ 0.87
PTCH2-202ENST00000438067 RAB30Q15771 203 aa20.49■□□□□ 0.87
PTCH2-202ENST00000438067 AKNAD1Q5T1N1 836 aa20.49■□□□□ 0.87
PTCH2-202ENST00000438067 MORC4Q8TE76 937 aa20.49■□□□□ 0.87
PTCH2-202ENST00000438067 PPM1EQ8WY54 764 aa20.49■□□□□ 0.87
PTCH2-202ENST00000438067 NOC4LQ9BVI4 516 aaKnown RBP20.49■□□□□ 0.87
PTCH2-202ENST00000438067 MTIF3Q9H2K0 278 aaKnown RBP20.49■□□□□ 0.87
PTCH2-202ENST00000438067 VTA1Q9NP79 307 aa20.49■□□□□ 0.87
PTCH2-202ENST00000438067 ANAPC4Q9UJX5 808 aa20.49■□□□□ 0.87
PTCH2-202ENST00000438067 B4GALT4O60513 344 aa20.48■□□□□ 0.87
PTCH2-202ENST00000438067 PSMC6P62333 389 aa20.48■□□□□ 0.87
PTCH2-202ENST00000438067 ADGRE1Q14246 886 aa20.48■□□□□ 0.87
PTCH2-202ENST00000438067 KIAA1211Q6ZU35 1233 aa20.48■□□□□ 0.87
PTCH2-202ENST00000438067 OTOP2Q7RTS6 562 aa20.48■□□□□ 0.87
PTCH2-202ENST00000438067 ORC4O43929 436 aa20.47■□□□□ 0.87
PTCH2-202ENST00000438067 SLC16A2P36021 539 aa20.47■□□□□ 0.87
PTCH2-202ENST00000438067 BAATQ14032 418 aaPredicted RBP20.47■□□□□ 0.87
PTCH2-202ENST00000438067 CCDC96Q2M329 555 aa20.47■□□□□ 0.87
PTCH2-202ENST00000438067 VPS53Q5VIR6 699 aa20.47■□□□□ 0.87
PTCH2-202ENST00000438067 TTBK2Q6IQ55 1244 aa20.47■□□□□ 0.87
PTCH2-202ENST00000438067 DCAF4Q8WV16 495 aa20.47■□□□□ 0.87
PTCH2-202ENST00000438067 WNT8AQ9H1J5 351 aa20.47■□□□□ 0.87
PTCH2-202ENST00000438067 RANBP17Q9H2T7 1088 aaKnown RBP20.47■□□□□ 0.87
PTCH2-202ENST00000438067 NKX2-4Q9H2Z4 354 aa20.47■□□□□ 0.87
PTCH2-202ENST00000438067 SLC28A3Q9HAS3 691 aa20.47■□□□□ 0.87
PTCH2-202ENST00000438067 MUC3AQ02505 3323 aa20.47■□□□□ 0.87
PTCH2-202ENST00000438067 FGRP09769 529 aa20.46■□□□□ 0.87
PTCH2-202ENST00000438067 DUSP28Q4G0W2 176 aa20.46■□□□□ 0.87
PTCH2-202ENST00000438067 BTNL9Q6UXG8 535 aa20.46■□□□□ 0.87
PTCH2-202ENST00000438067 ADD3Q9UEY8 706 aaKnown RBP20.46■□□□□ 0.87
PTCH2-202ENST00000438067 YBX2Q9Y2T7 364 aaKnown RBP20.46■□□□□ 0.87
PTCH2-202ENST00000438067 ALX1Q15699 326 aa20.45■□□□□ 0.86
PTCH2-202ENST00000438067 RPUSD2Q8IZ73 545 aaKnown RBP20.45■□□□□ 0.86
PTCH2-202ENST00000438067 ATXN2LQ8WWM7 1075 aaKnown RBP20.45■□□□□ 0.86
PTCH2-202ENST00000438067 VWCEQ96DN2 955 aa20.45■□□□□ 0.86
PTCH2-202ENST00000438067 WDR11Q9BZH6 1224 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms