RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 GOLGA8CPA6NN73 597 aa17.41■□□□□ 0.38
PTPN13-204ENST00000436978 TMEM232C9JQI7 657 aa17.41■□□□□ 0.38
PTPN13-204ENST00000436978 STAT2P52630 851 aa17.41■□□□□ 0.38
PTPN13-204ENST00000436978 PCDHA1Q9Y5I3 950 aa17.41■□□□□ 0.38
PTPN13-204ENST00000436978 IGSF1Q8N6C5 1336 aa17.41■□□□□ 0.38
PTPN13-204ENST00000436978 CMA1P23946 247 aa17.41■□□□□ 0.38
PTPN13-204ENST00000436978 RPS6KC1Q96S38 1066 aa17.41■□□□□ 0.38
PTPN13-204ENST00000436978 TTLL3Q9Y4R7 772 aa17.41■□□□□ 0.38
PTPN13-204ENST00000436978 KCTD2Q14681 263 aa17.41■□□□□ 0.38
PTPN13-204ENST00000436978 LONRF2Q1L5Z9 754 aa17.41■□□□□ 0.38
PTPN13-204ENST00000436978 LRCH2Q5VUJ6 765 aa17.41■□□□□ 0.38
PTPN13-204ENST00000436978 CACNA2D3Q8IZS8 1091 aa17.41■□□□□ 0.38
PTPN13-204ENST00000436978 TRERF1Q96PN7 1200 aa17.41■□□□□ 0.38
PTPN13-204ENST00000436978 DHX36Q9H2U1 1008 aaKnown RBP17.41■□□□□ 0.38
PTPN13-204ENST00000436978 VCXQ9H320 206 aa17.41■□□□□ 0.38
PTPN13-204ENST00000436978 PCDHA4Q9UN74 947 aa17.41■□□□□ 0.38
PTPN13-204ENST00000436978 METP08581 1390 aa17.41■□□□□ 0.38
PTPN13-204ENST00000436978 TLR3O15455 904 aaKnown RBP17.41■□□□□ 0.38
PTPN13-204ENST00000436978 TMEM191BP0C7N4 346 aa17.41■□□□□ 0.38
PTPN13-204ENST00000436978 PPFIA1Q13136 1202 aa17.41■□□□□ 0.38
PTPN13-204ENST00000436978 HESX1Q9UBX0 185 aa17.41■□□□□ 0.38
PTPN13-204ENST00000436978 GCFC2P16383 781 aaKnown RBP17.4■□□□□ 0.38
PTPN13-204ENST00000436978 PLCB4Q15147 1175 aa17.4■□□□□ 0.38
PTPN13-204ENST00000436978 PLEKHF1Q96S99 279 aa17.4■□□□□ 0.38
PTPN13-204ENST00000436978 TTC31Q49AM3 519 aaPredicted RBP17.4■□□□□ 0.38
PTPN13-204ENST00000436978 PPP4R1Q8TF05 950 aa17.4■□□□□ 0.38
PTPN13-204ENST00000436978 POMGNT1Q8WZA1 660 aa17.4■□□□□ 0.38
PTPN13-204ENST00000436978 RNF26Q9BY78 433 aaPredicted RBP17.4■□□□□ 0.38
PTPN13-204ENST00000436978 RIC8AQ9NPQ8 531 aa17.4■□□□□ 0.38
PTPN13-204ENST00000436978 SAR1BQ9Y6B6 198 aa17.4■□□□□ 0.38
PTPN13-204ENST00000436978 FMNL1O95466 1100 aaPredicted RBP17.4■□□□□ 0.38
PTPN13-204ENST00000436978 LRRC24Q50LG9 513 aa17.4■□□□□ 0.38
PTPN13-204ENST00000436978 OR8K1Q8NGG5 319 aa17.4■□□□□ 0.38
PTPN13-204ENST00000436978 BPIFB4P59827 614 aa17.4■□□□□ 0.38
PTPN13-204ENST00000436978 NEDD9Q14511 834 aa17.4■□□□□ 0.38
PTPN13-204ENST00000436978 TMED8Q6PL24 325 aaPredicted RBP17.4■□□□□ 0.38
PTPN13-204ENST00000436978 C10orf67Q8IYJ2 551 aa17.4■□□□□ 0.38
PTPN13-204ENST00000436978 CARMIL3Q8ND23 1372 aa17.4■□□□□ 0.38
PTPN13-204ENST00000436978 ARMC9Q7Z3E5 817 aa17.4■□□□□ 0.38
PTPN13-204ENST00000436978 SDCCAG8Q86SQ7 713 aaPredicted RBP17.4■□□□□ 0.38
PTPN13-204ENST00000436978 U2AF1L4Q8WU68 220 aaKnown RBP17.4■□□□□ 0.38
PTPN13-204ENST00000436978 ST7Q9NRC1 585 aa17.4■□□□□ 0.38
PTPN13-204ENST00000436978 DPP9Q86TI2 863 aa17.39■□□□□ 0.37
PTPN13-204ENST00000436978 ANKRD36BP1Q96IX9 119 aa17.39■□□□□ 0.37
PTPN13-204ENST00000436978 SEPT9Q9UHD8 586 aaPredicted RBP17.39■□□□□ 0.37
PTPN13-204ENST00000436978 TPCN1Q9ULQ1 816 aa17.39■□□□□ 0.37
PTPN13-204ENST00000436978 HEG1Q9ULI3 1381 aa17.39■□□□□ 0.37
PTPN13-204ENST00000436978 ARMCX5Q6P1M9 558 aa17.39■□□□□ 0.37
PTPN13-204ENST00000436978 GPKOWQ92917 476 aaPredicted RBP eCLIP17.39■□□□□ 0.37
PTPN13-204ENST00000436978 EAF2Q96CJ1 260 aaPredicted RBP17.39■□□□□ 0.37
PTPN13-204ENST00000436978 TRIM11Q96F44 468 aa17.39■□□□□ 0.37
PTPN13-204ENST00000436978 RSRC1Q96IZ7 334 aaKnown RBP17.39■□□□□ 0.37
PTPN13-204ENST00000436978 ZC3H13Q5T200 1668 aaKnown RBP17.39■□□□□ 0.37
PTPN13-204ENST00000436978 THAP12O43422 761 aa17.39■□□□□ 0.37
PTPN13-204ENST00000436978 ZMYM1Q5SVZ6 1142 aa17.39■□□□□ 0.37
PTPN13-204ENST00000436978 TYW5A2RUC4 315 aaKnown RBP17.39■□□□□ 0.37
PTPN13-204ENST00000436978 MYL1P05976 194 aa17.39■□□□□ 0.37
PTPN13-204ENST00000436978 PTPREP23469 700 aa17.39■□□□□ 0.37
PTPN13-204ENST00000436978 BCAP29Q9UHQ4 241 aa17.39■□□□□ 0.37
PTPN13-204ENST00000436978 TACC3Q9Y6A5 838 aa17.39■□□□□ 0.37
PTPN13-204ENST00000436978 ADGRB3O60242 1522 aa17.39■□□□□ 0.37
PTPN13-204ENST00000436978 UIMC1Q96RL1 719 aa17.39■□□□□ 0.37
PTPN13-204ENST00000436978 VCX3BQ9H321 246 aa17.39■□□□□ 0.37
PTPN13-204ENST00000436978 PLA2R1Q13018 1463 aa17.39■□□□□ 0.37
PTPN13-204ENST00000436978 LMNB1P20700 586 aa17.38■□□□□ 0.37
PTPN13-204ENST00000436978 PPP2R5DQ14738 602 aa17.38■□□□□ 0.37
PTPN13-204ENST00000436978 ANKFY1Q9P2R3 1169 aa17.38■□□□□ 0.37
PTPN13-204ENST00000436978 STAP2Q9UGK3 403 aa17.38■□□□□ 0.37
PTPN13-204ENST00000436978 LRRIQ4A6NIV6 560 aa17.38■□□□□ 0.37
PTPN13-204ENST00000436978 KCNQ3O43525 872 aa17.38■□□□□ 0.37
PTPN13-204ENST00000436978 BRD1O95696 1058 aa17.38■□□□□ 0.37
PTPN13-204ENST00000436978 LRMPQ12912 555 aa17.38■□□□□ 0.37
PTPN13-204ENST00000436978 SLF1Q9BQI6 1058 aa17.38■□□□□ 0.37
PTPN13-204ENST00000436978 ZNF577Q9BSK1 485 aa17.38■□□□□ 0.37
PTPN13-204ENST00000436978 TRIM31Q9BZY9 425 aa17.38■□□□□ 0.37
PTPN13-204ENST00000436978 A2ML1A8K2U0 1454 aa17.38■□□□□ 0.37
PTPN13-204ENST00000436978 RPAP1Q9BWH6 1393 aaPredicted RBP17.38■□□□□ 0.37
PTPN13-204ENST00000436978 KRT15P19012 456 aa17.38■□□□□ 0.37
PTPN13-204ENST00000436978 KRBA2Q6ZNG9 492 aa17.38■□□□□ 0.37
PTPN13-204ENST00000436978 AP5M1Q9H0R1 490 aa17.38■□□□□ 0.37
PTPN13-204ENST00000436978 GADD45BO75293 160 aaPredicted RBP17.38■□□□□ 0.37
PTPN13-204ENST00000436978 NPR1P16066 1061 aa17.38■□□□□ 0.37
PTPN13-204ENST00000436978 PTH1RQ03431 593 aa17.38■□□□□ 0.37
PTPN13-204ENST00000436978 PRPSAP1Q14558 356 aa17.38■□□□□ 0.37
PTPN13-204ENST00000436978 WHAMMP3Q1A5X7 153 aa17.38■□□□□ 0.37
PTPN13-204ENST00000436978 PALM2Q8IXS6 379 aa17.38■□□□□ 0.37
PTPN13-204ENST00000436978 RDH13Q8NBN7 331 aa17.38■□□□□ 0.37
PTPN13-204ENST00000436978 KANSL2Q9H9L4 492 aa17.38■□□□□ 0.37
PTPN13-204ENST00000436978 ARHGEF37A1IGU5 675 aa17.38■□□□□ 0.37
PTPN13-204ENST00000436978 MYL7Q01449 175 aa17.38■□□□□ 0.37
PTPN13-204ENST00000436978 POTEDQ86YR6 584 aa17.38■□□□□ 0.37
PTPN13-204ENST00000436978 KLHL7Q8IXQ5 586 aa17.38■□□□□ 0.37
PTPN13-204ENST00000436978 ANO3Q9BYT9 981 aa17.38■□□□□ 0.37
PTPN13-204ENST00000436978 ARHGEF25Q86VW2 580 aa17.38■□□□□ 0.37
PTPN13-204ENST00000436978 SYMPKQ92797 1274 aaKnown RBP17.38■□□□□ 0.37
PTPN13-204ENST00000436978 LMBRD1Q9NUN5 540 aa17.38■□□□□ 0.37
PTPN13-204ENST00000436978 ATP8B3O60423 1300 aa17.38■□□□□ 0.37
PTPN13-204ENST00000436978 PPP6R2O75170 966 aa17.37■□□□□ 0.37
PTPN13-204ENST00000436978 KRT27Q7Z3Y8 459 aa17.37■□□□□ 0.37
PTPN13-204ENST00000436978 MCUR1Q96AQ8 359 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms