RNA–Protein interactions for RNA: ENST00000435953.2

AC004448.3-201, humanhuman

TSL 2 BASIC

Gene AC004448.3, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004448.3-201ENST00000435953 DOCK1Q14185 1865 aa11.35□□□□□ -0.59
AC004448.3-201ENST00000435953 ABCB11O95342 1321 aa11.35□□□□□ -0.59
AC004448.3-201ENST00000435953 KIF28PB7ZC32 967 aa11.34□□□□□ -0.59
AC004448.3-201ENST00000435953 M0R2N6 131 aa11.34□□□□□ -0.59
AC004448.3-201ENST00000435953 CNMDO75829 334 aa11.34□□□□□ -0.59
AC004448.3-201ENST00000435953 CYP2C8P10632 490 aa11.34□□□□□ -0.59
AC004448.3-201ENST00000435953 ALAS1P13196 640 aa11.34□□□□□ -0.59
AC004448.3-201ENST00000435953 TAL1P17542 331 aaPredicted RBP11.34□□□□□ -0.59
AC004448.3-201ENST00000435953 ADCY7P51828 1080 aa11.34□□□□□ -0.59
AC004448.3-201ENST00000435953 SREBF2Q12772 1141 aa11.34□□□□□ -0.59
AC004448.3-201ENST00000435953 NR5A1Q13285 461 aa11.34□□□□□ -0.59
AC004448.3-201ENST00000435953 GNL2Q13823 731 aaKnown RBP11.34□□□□□ -0.59
AC004448.3-201ENST00000435953 TKFCQ3LXA3 575 aa11.34□□□□□ -0.59
AC004448.3-201ENST00000435953 IFNL1Q8IU54 200 aa11.34□□□□□ -0.59
AC004448.3-201ENST00000435953 TEX2Q8IWB9 1127 aa11.34□□□□□ -0.59
AC004448.3-201ENST00000435953 GTF3C2Q8WUA4 911 aaPredicted RBP11.34□□□□□ -0.59
AC004448.3-201ENST00000435953 CLEC4DQ8WXI8 215 aa11.34□□□□□ -0.59
AC004448.3-201ENST00000435953 TBC1D5Q92609 795 aa11.34□□□□□ -0.59
AC004448.3-201ENST00000435953 TNPO1Q92973 898 aaKnown RBP11.34□□□□□ -0.59
AC004448.3-201ENST00000435953 CUL5Q93034 780 aa11.34□□□□□ -0.59
AC004448.3-201ENST00000435953 TRERF1Q96PN7 1200 aa11.34□□□□□ -0.59
AC004448.3-201ENST00000435953 ZIC5Q96T25 663 aa11.34□□□□□ -0.59
AC004448.3-201ENST00000435953 TEX13BQ9BXU2 312 aa11.34□□□□□ -0.59
AC004448.3-201ENST00000435953 PCDHA6Q9UN73 950 aa11.34□□□□□ -0.59
AC004448.3-201ENST00000435953 RIPK3Q9Y572 518 aa11.34□□□□□ -0.59
AC004448.3-201ENST00000435953 PCDHA8Q9Y5H6 950 aa11.34□□□□□ -0.59
AC004448.3-201ENST00000435953 ATP6V1DQ9Y5K8 247 aa11.34□□□□□ -0.59
AC004448.3-201ENST00000435953 MYH8P13535 1937 aa11.34□□□□□ -0.59
AC004448.3-201ENST00000435953 IGF2BP3O00425 579 aaKnown RBP eCLIP11.33□□□□□ -0.6
AC004448.3-201ENST00000435953 MEIS2O14770 477 aa11.33□□□□□ -0.6
AC004448.3-201ENST00000435953 OPLAHO14841 1288 aa11.33□□□□□ -0.6
AC004448.3-201ENST00000435953 GCLCP48506 637 aaPredicted RBP11.33□□□□□ -0.6
AC004448.3-201ENST00000435953 NOGQ13253 232 aa11.33□□□□□ -0.6
AC004448.3-201ENST00000435953 GRM1Q13255 1194 aa11.33□□□□□ -0.6
AC004448.3-201ENST00000435953 PLS1Q14651 629 aa11.33□□□□□ -0.6
AC004448.3-201ENST00000435953 Q3C1V9 767 aa11.33□□□□□ -0.6
AC004448.3-201ENST00000435953 SNRNP48Q6IEG0 339 aaKnown RBP11.33□□□□□ -0.6
AC004448.3-201ENST00000435953 BRAPQ7Z569 592 aa11.33□□□□□ -0.6
AC004448.3-201ENST00000435953 MCF2L2Q86YR7 1114 aa11.33□□□□□ -0.6
AC004448.3-201ENST00000435953 RIOX2Q8IUF8 465 aa11.33□□□□□ -0.6
AC004448.3-201ENST00000435953 NOSTRINQ8IVI9 506 aa11.33□□□□□ -0.6
AC004448.3-201ENST00000435953 REM2Q8IYK8 340 aaPredicted RBP11.33□□□□□ -0.6
AC004448.3-201ENST00000435953 TNFRSF25Q93038 417 aa11.33□□□□□ -0.6
AC004448.3-201ENST00000435953 CAPNS2Q96L46 248 aa11.33□□□□□ -0.6
AC004448.3-201ENST00000435953 SPATC1LQ9H0A9 340 aa11.33□□□□□ -0.6
AC004448.3-201ENST00000435953 BIN2Q9UBW5 565 aaPredicted RBP11.33□□□□□ -0.6
AC004448.3-201ENST00000435953 GCOM1H8Y6P7 765 aaPredicted RBP11.32□□□□□ -0.6
AC004448.3-201ENST00000435953 PIK3CDO00329 1044 aa11.32□□□□□ -0.6
AC004448.3-201ENST00000435953 PEX10O60683 326 aa11.32□□□□□ -0.6
AC004448.3-201ENST00000435953 AOC2O75106 756 aa11.32□□□□□ -0.6
AC004448.3-201ENST00000435953 POLR2MP0CAP2 368 aa11.32□□□□□ -0.6
AC004448.3-201ENST00000435953 CLK2P49760 499 aaKnown RBP11.32□□□□□ -0.6
AC004448.3-201ENST00000435953 FOXD4L6Q3SYB3 417 aaPredicted RBP11.32□□□□□ -0.6
AC004448.3-201ENST00000435953 MUM1L1Q5H9M0 696 aa11.32□□□□□ -0.6
AC004448.3-201ENST00000435953 JAKMIP3Q5VZ66 844 aa11.32□□□□□ -0.6
AC004448.3-201ENST00000435953 MCTP2Q6DN12 878 aa11.32□□□□□ -0.6
AC004448.3-201ENST00000435953 FAM173BQ6P4H8 233 aa11.32□□□□□ -0.6
AC004448.3-201ENST00000435953 USP17L6PQ6QN14 398 aa11.32□□□□□ -0.6
AC004448.3-201ENST00000435953 FOXD4L3Q6VB84 417 aaPredicted RBP11.32□□□□□ -0.6
AC004448.3-201ENST00000435953 KRT25Q7Z3Z0 450 aa11.32□□□□□ -0.6
AC004448.3-201ENST00000435953 SAMD3Q8N6K7 520 aa11.32□□□□□ -0.6
AC004448.3-201ENST00000435953 CHST13Q8NET6 341 aa11.32□□□□□ -0.6
AC004448.3-201ENST00000435953 GPRC5AQ8NFJ5 357 aa11.32□□□□□ -0.6
AC004448.3-201ENST00000435953 SMCR8Q8TEV9 937 aaPredicted RBP11.32□□□□□ -0.6
AC004448.3-201ENST00000435953 PARK7Q99497 189 aaKnown RBP11.32□□□□□ -0.6
AC004448.3-201ENST00000435953 PAGR1Q9BTK6 254 aa11.32□□□□□ -0.6
AC004448.3-201ENST00000435953 MOV10L1Q9BXT6 1211 aaKnown RBP11.32□□□□□ -0.6
AC004448.3-201ENST00000435953 MAF1Q9H063 256 aa11.32□□□□□ -0.6
AC004448.3-201ENST00000435953 TXNRD2Q9NNW7 524 aa11.32□□□□□ -0.6
AC004448.3-201ENST00000435953 TMEM260Q9NX78 707 aa11.32□□□□□ -0.6
AC004448.3-201ENST00000435953 MAP3K20Q9NYL2 800 aaKnown RBP11.32□□□□□ -0.6
AC004448.3-201ENST00000435953 MYH4Q9Y623 1939 aa11.31□□□□□ -0.6
AC004448.3-201ENST00000435953 PHIPQ8WWQ0 1821 aa11.31□□□□□ -0.6
AC004448.3-201ENST00000435953 ATAD5Q96QE3 1844 aa11.31□□□□□ -0.6
AC004448.3-201ENST00000435953 CCDC194A0A1B0GVG4 234 aa11.31□□□□□ -0.6
AC004448.3-201ENST00000435953 NFIBO00712 420 aa11.31□□□□□ -0.6
AC004448.3-201ENST00000435953 SLC25A27O95847 323 aa11.31□□□□□ -0.6
AC004448.3-201ENST00000435953 CFBP00751 764 aa11.31□□□□□ -0.6
AC004448.3-201ENST00000435953 FOSP01100 380 aaPredicted RBP11.31□□□□□ -0.6
AC004448.3-201ENST00000435953 GHRHRQ02643 423 aa11.31□□□□□ -0.6
AC004448.3-201ENST00000435953 UBE2SQ16763 222 aa11.31□□□□□ -0.6
AC004448.3-201ENST00000435953 NOM1Q5C9Z4 860 aaKnown RBP11.31□□□□□ -0.6
AC004448.3-201ENST00000435953 EARS2Q5JPH6 523 aaKnown RBP11.31□□□□□ -0.6
AC004448.3-201ENST00000435953 MYSM1Q5VVJ2 828 aa11.31□□□□□ -0.6
AC004448.3-201ENST00000435953 ATL3Q6DD88 541 aa11.31□□□□□ -0.6
AC004448.3-201ENST00000435953 CLEC17AQ6ZS10 378 aa11.31□□□□□ -0.6
AC004448.3-201ENST00000435953 REXO1Q8N1G1 1221 aaKnown RBP11.31□□□□□ -0.6
AC004448.3-201ENST00000435953 RASGRP4Q8TDF6 673 aa11.31□□□□□ -0.6
AC004448.3-201ENST00000435953 HOMER2Q9NSB8 354 aa11.31□□□□□ -0.6
AC004448.3-201ENST00000435953 RNF146Q9NTX7 359 aa11.31□□□□□ -0.6
AC004448.3-201ENST00000435953 TFIP11Q9UBB9 837 aaKnown RBP11.31□□□□□ -0.6
AC004448.3-201ENST00000435953 MORF4L1Q9UBU8 362 aa11.31□□□□□ -0.6
AC004448.3-201ENST00000435953 BAG4O95429 457 aaKnown RBP11.3□□□□□ -0.6
AC004448.3-201ENST00000435953 HOXA13P31271 388 aaPredicted RBP11.3□□□□□ -0.6
AC004448.3-201ENST00000435953 COPB2P35606 906 aa11.3□□□□□ -0.6
AC004448.3-201ENST00000435953 MAP2K2P36507 400 aa11.3□□□□□ -0.6
AC004448.3-201ENST00000435953 VEGFBP49765 207 aa11.3□□□□□ -0.6
AC004448.3-201ENST00000435953 TOB1P50616 345 aaPredicted RBP11.3□□□□□ -0.6
AC004448.3-201ENST00000435953 HSD17B4P51659 736 aa11.3□□□□□ -0.6
AC004448.3-201ENST00000435953 ERVK-9P63128 1117 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms