RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 CLEC10AQ8IUN9 316 aa13.52□□□□□ -0.25
CTCFL-209ENST00000433949 FANCLQ9NW38 375 aa13.52□□□□□ -0.25
CTCFL-209ENST00000433949 A0A087X0B3 334 aa13.51□□□□□ -0.25
CTCFL-209ENST00000433949 GDF11O95390 407 aa13.51□□□□□ -0.25
CTCFL-209ENST00000433949 ATP1A3P13637 1013 aa13.51□□□□□ -0.25
CTCFL-209ENST00000433949 AKR1B1P15121 316 aa13.51□□□□□ -0.25
CTCFL-209ENST00000433949 SHMT1P34896 483 aa13.51□□□□□ -0.25
CTCFL-209ENST00000433949 CCZ1BP86790 482 aa13.51□□□□□ -0.25
CTCFL-209ENST00000433949 CCZ1P86791 482 aaPredicted RBP13.51□□□□□ -0.25
CTCFL-209ENST00000433949 SEMA3FQ13275 785 aa13.51□□□□□ -0.25
CTCFL-209ENST00000433949 PRKG1Q13976 671 aa13.51□□□□□ -0.25
CTCFL-209ENST00000433949 E2F4Q16254 413 aa13.51□□□□□ -0.25
CTCFL-209ENST00000433949 SLC35G1Q2M3R5 365 aa13.51□□□□□ -0.25
CTCFL-209ENST00000433949 DTHD1Q6ZMT9 781 aa13.51□□□□□ -0.25
CTCFL-209ENST00000433949 C4orf32Q8N8J7 132 aa13.51□□□□□ -0.25
CTCFL-209ENST00000433949 EHD4Q9H223 541 aa13.51□□□□□ -0.25
CTCFL-209ENST00000433949 RIOX1Q9H6W3 641 aa13.51□□□□□ -0.25
CTCFL-209ENST00000433949 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.51□□□□□ -0.25
CTCFL-209ENST00000433949 IGKV6D-41A0A0C4DH26 115 aa13.51□□□□□ -0.25
CTCFL-209ENST00000433949 POTECB2RU33 542 aa13.51□□□□□ -0.25
CTCFL-209ENST00000433949 TTLL1O95922 423 aa13.51□□□□□ -0.25
CTCFL-209ENST00000433949 MMP14P50281 582 aa13.51□□□□□ -0.25
CTCFL-209ENST00000433949 TNFAIP1Q13829 316 aa13.51□□□□□ -0.25
CTCFL-209ENST00000433949 NBPF12Q5TAG4 269 aaPredicted RBP13.51□□□□□ -0.25
CTCFL-209ENST00000433949 CCDC112Q8NEF3 446 aa13.51□□□□□ -0.25
CTCFL-209ENST00000433949 CCDC17Q96LX7 622 aa13.51□□□□□ -0.25
CTCFL-209ENST00000433949 RRAGCQ9HB90 399 aa13.51□□□□□ -0.25
CTCFL-209ENST00000433949 CLEC11AQ9Y240 323 aa13.51□□□□□ -0.25
CTCFL-209ENST00000433949 NFE2L3Q9Y4A8 694 aa13.51□□□□□ -0.25
CTCFL-209ENST00000433949 NPM3O75607 178 aaKnown RBP13.5□□□□□ -0.25
CTCFL-209ENST00000433949 MYL1P05976 194 aa13.5□□□□□ -0.25
CTCFL-209ENST00000433949 POTEIP0CG38 1075 aa13.5□□□□□ -0.25
CTCFL-209ENST00000433949 POTEJP0CG39 1038 aa13.5□□□□□ -0.25
CTCFL-209ENST00000433949 GOLGA8HP0CJ92 632 aa13.5□□□□□ -0.25
CTCFL-209ENST00000433949 SNHG28P0DPA3 235 aa13.5□□□□□ -0.25
CTCFL-209ENST00000433949 PDHBP11177 359 aa13.5□□□□□ -0.25
CTCFL-209ENST00000433949 ZNF18P17022 549 aa13.5□□□□□ -0.25
CTCFL-209ENST00000433949 AFMP43652 599 aa13.5□□□□□ -0.25
CTCFL-209ENST00000433949 ATP2B2Q01814 1243 aa13.5□□□□□ -0.25
CTCFL-209ENST00000433949 USP17L2Q6R6M4 530 aa13.5□□□□□ -0.25
CTCFL-209ENST00000433949 FAM83AQ86UY5 434 aa13.5□□□□□ -0.25
CTCFL-209ENST00000433949 GRAMD1CQ8IYS0 662 aa13.5□□□□□ -0.25
CTCFL-209ENST00000433949 L3MBTL3Q96JM7 780 aaPredicted RBP13.5□□□□□ -0.25
CTCFL-209ENST00000433949 AK8Q96MA6 479 aa13.5□□□□□ -0.25
CTCFL-209ENST00000433949 RMND1Q9NWS8 449 aa13.5□□□□□ -0.25
CTCFL-209ENST00000433949 SMCO2A6NFE2 343 aa13.49□□□□□ -0.25
CTCFL-209ENST00000433949 ADM5C9JUS6 153 aa13.49□□□□□ -0.25
CTCFL-209ENST00000433949 CDK11BP21127 795 aaKnown RBP13.49□□□□□ -0.25
CTCFL-209ENST00000433949 GTF2F1P35269 517 aaKnown RBP eCLIP13.49□□□□□ -0.253e-6■■□□□ 13.2
CTCFL-209ENST00000433949 RRP1BQ14684 758 aaKnown RBP13.49□□□□□ -0.25
CTCFL-209ENST00000433949 NONOQ15233 471 aaKnown RBP eCLIP13.49□□□□□ -0.25
CTCFL-209ENST00000433949 TPD52L1Q16890 204 aaPredicted RBP13.49□□□□□ -0.25
CTCFL-209ENST00000433949 CERKLQ49MI3 558 aaPredicted RBP13.49□□□□□ -0.25
CTCFL-209ENST00000433949 FKBP1CQ5VVH2 108 aa13.49□□□□□ -0.25
CTCFL-209ENST00000433949 DCPSQ96C86 337 aaKnown RBP13.49□□□□□ -0.25
CTCFL-209ENST00000433949 TAF1DQ9H5J8 278 aaPredicted RBP13.49□□□□□ -0.25
CTCFL-209ENST00000433949 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.49□□□□□ -0.25
CTCFL-209ENST00000433949 KIF2AO00139 706 aaPredicted RBP13.49□□□□□ -0.25
CTCFL-209ENST00000433949 GTPBP6O43824 516 aaPredicted RBP13.49□□□□□ -0.25
CTCFL-209ENST00000433949 INF2Q27J81 1249 aa13.49□□□□□ -0.25
CTCFL-209ENST00000433949 GPATCH4Q5T3I0 446 aaKnown RBP13.49□□□□□ -0.25
CTCFL-209ENST00000433949 PDXDC2PQ6P474 469 aa13.49□□□□□ -0.25
CTCFL-209ENST00000433949 VSTM4Q8IW00 320 aa13.49□□□□□ -0.25
CTCFL-209ENST00000433949 TEPSINQ96N21 525 aa13.49□□□□□ -0.25
CTCFL-209ENST00000433949 CCSER1Q9C0I3 900 aa13.49□□□□□ -0.25
CTCFL-209ENST00000433949 JAG1P78504 1218 aa13.48□□□□□ -0.25
CTCFL-209ENST00000433949 ARID5BQ14865 1188 aa13.48□□□□□ -0.25
CTCFL-209ENST00000433949 IL17AQ16552 155 aa13.48□□□□□ -0.25
CTCFL-209ENST00000433949 PPP1R18Q6NYC8 613 aa13.48□□□□□ -0.25
CTCFL-209ENST00000433949 HOMER1Q86YM7 354 aa13.48□□□□□ -0.25
CTCFL-209ENST00000433949 RASGRP4Q8TDF6 673 aa13.48□□□□□ -0.25
CTCFL-209ENST00000433949 CUEDC2Q9H467 287 aa13.48□□□□□ -0.25
CTCFL-209ENST00000433949 MAGEF1Q9HAY2 307 aa13.48□□□□□ -0.25
CTCFL-209ENST00000433949 DISC1Q9NRI5 854 aa13.48□□□□□ -0.25
CTCFL-209ENST00000433949 PAXBP1Q9Y5B6 917 aa13.48□□□□□ -0.25
CTCFL-209ENST00000433949 ATRNL1Q5VV63 1379 aa13.48□□□□□ -0.25
CTCFL-209ENST00000433949 IQCA1LA6NCM1 817 aa13.48□□□□□ -0.25
CTCFL-209ENST00000433949 USP17L5A8MUK1 530 aa13.48□□□□□ -0.25
CTCFL-209ENST00000433949 CCP110O43303 1012 aa13.48□□□□□ -0.25
CTCFL-209ENST00000433949 RAD21O60216 631 aa13.48□□□□□ -0.25
CTCFL-209ENST00000433949 STAT6P42226 847 aa13.48□□□□□ -0.25
CTCFL-209ENST00000433949 FMR1Q06787 632 aaKnown RBP eCLIP13.48□□□□□ -0.259e-8■■□□□ 14.3
CTCFL-209ENST00000433949 SPATA1Q5VX52 437 aa13.48□□□□□ -0.25
CTCFL-209ENST00000433949 KRT26Q7Z3Y9 468 aa13.48□□□□□ -0.25
CTCFL-209ENST00000433949 NEK8Q86SG6 692 aa13.48□□□□□ -0.25
CTCFL-209ENST00000433949 APOBEC3FQ8IUX4 373 aaKnown RBP13.48□□□□□ -0.25
CTCFL-209ENST00000433949 SULF1Q8IWU6 871 aa13.48□□□□□ -0.25
CTCFL-209ENST00000433949 REXO1Q8N1G1 1221 aaKnown RBP13.48□□□□□ -0.25
CTCFL-209ENST00000433949 CTAGE1Q96RT6 745 aa13.48□□□□□ -0.25
CTCFL-209ENST00000433949 PGAP2Q9UHJ9 254 aa13.48□□□□□ -0.25
CTCFL-209ENST00000433949 ZC3H4Q9UPT8 1303 aaKnown RBP13.48□□□□□ -0.25
CTCFL-209ENST00000433949 ADAMTS3O15072 1205 aa13.47□□□□□ -0.25
CTCFL-209ENST00000433949 TUBB4AP04350 444 aa13.47□□□□□ -0.25
CTCFL-209ENST00000433949 TNNT1P13805 278 aa13.47□□□□□ -0.25
CTCFL-209ENST00000433949 UBA7P41226 1012 aa13.47□□□□□ -0.25
CTCFL-209ENST00000433949 ARMCX5Q6P1M9 558 aa13.47□□□□□ -0.25
CTCFL-209ENST00000433949 C16orf45Q96MC5 204 aaPredicted RBP13.47□□□□□ -0.25
CTCFL-209ENST00000433949 PIGSQ96S52 555 aa13.47□□□□□ -0.25
CTCFL-209ENST00000433949 NMRK2Q9NPI5 230 aa13.47□□□□□ -0.25
CTCFL-209ENST00000433949 SIPA1L1O43166 1804 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms