RNA–Protein interactions for RNA: ENST00000433463.1

POLR2B-204, Transcript of RNA polymerase II subunit B, humanhuman

TSL 3

Gene POLR2B, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-204ENST00000433463 RAG1P15918 1043 aa27.46■■□□□ 1.99
POLR2B-204ENST00000433463 NT5C2P49902 561 aa27.46■■□□□ 1.99
POLR2B-204ENST00000433463 GJA9P57773 515 aa27.46■■□□□ 1.99
POLR2B-204ENST00000433463 TNFAIP2Q03169 654 aa27.46■■□□□ 1.99
POLR2B-204ENST00000433463 MUM1L1Q5H9M0 696 aa27.46■■□□□ 1.99
POLR2B-204ENST00000433463 TOX2Q96NM4 488 aa27.46■■□□□ 1.99
POLR2B-204ENST00000433463 TMEM39AQ9NV64 488 aa27.46■■□□□ 1.99
POLR2B-204ENST00000433463 CYP39A1Q9NYL5 469 aa27.46■■□□□ 1.99
POLR2B-204ENST00000433463 LAMA3Q16787 3333 aa27.46■■□□□ 1.99
POLR2B-204ENST00000433463 ELP1O95163 1332 aa27.45■■□□□ 1.99
POLR2B-204ENST00000433463 CCDC178Q5BJE1 867 aa27.45■■□□□ 1.98
POLR2B-204ENST00000433463 CCSAPQ6IQ19 270 aaPredicted RBP27.45■■□□□ 1.98
POLR2B-204ENST00000433463 UPF3AQ9H1J1 476 aaKnown RBP27.45■■□□□ 1.98
POLR2B-204ENST00000433463 KIAA0355O15063 1070 aa27.44■■□□□ 1.98
POLR2B-204ENST00000433463 ASGR1P07306 291 aa27.44■■□□□ 1.98
POLR2B-204ENST00000433463 PDHBP11177 359 aa27.44■■□□□ 1.98
POLR2B-204ENST00000433463 SHHQ15465 462 aa27.44■■□□□ 1.98
POLR2B-204ENST00000433463 Q7L0L9 218 aa27.44■■□□□ 1.98
POLR2B-204ENST00000433463 ANKRD33Q7Z3H0 272 aa27.44■■□□□ 1.98
POLR2B-204ENST00000433463 TBC1D10CQ8IV04 446 aa27.44■■□□□ 1.98
POLR2B-204ENST00000433463 KATNBL1Q9H079 304 aa27.44■■□□□ 1.98
POLR2B-204ENST00000433463 ADD3Q9UEY8 706 aaKnown RBP27.44■■□□□ 1.98
POLR2B-204ENST00000433463 LTBP2Q14767 1821 aa27.44■■□□□ 1.98
POLR2B-204ENST00000433463 MROH7Q68CQ1 1323 aa27.43■■□□□ 1.98
POLR2B-204ENST00000433463 MYADML2A6NDP7 307 aa27.43■■□□□ 1.98
POLR2B-204ENST00000433463 IQCA1Q86XH1 822 aa27.43■■□□□ 1.98
POLR2B-204ENST00000433463 ADCY6O43306 1168 aa27.42■■□□□ 1.98
POLR2B-204ENST00000433463 DGKHQ86XP1 1220 aa27.42■■□□□ 1.98
POLR2B-204ENST00000433463 AP5M1Q9H0R1 490 aa27.42■■□□□ 1.98
POLR2B-204ENST00000433463 CTNNA3Q9UI47 895 aa27.42■■□□□ 1.98
POLR2B-204ENST00000433463 SUPT16HQ9Y5B9 1047 aaKnown RBP27.42■■□□□ 1.98
POLR2B-204ENST00000433463 ZNF543Q08ER8 600 aa27.41■■□□□ 1.98
POLR2B-204ENST00000433463 FAAP100Q0VG06 881 aa27.41■■□□□ 1.98
POLR2B-204ENST00000433463 BAATQ14032 418 aaPredicted RBP27.41■■□□□ 1.98
POLR2B-204ENST00000433463 IQSEC1Q6DN90 963 aa27.41■■□□□ 1.98
POLR2B-204ENST00000433463 ZKSCAN3Q9BRR0 538 aa27.41■■□□□ 1.98
POLR2B-204ENST00000433463 DSCC1Q9BVC3 393 aa27.41■■□□□ 1.98
POLR2B-204ENST00000433463 A0A0U1RQG5 324 aaPredicted RBP27.4■■□□□ 1.98
POLR2B-204ENST00000433463 PTPDC1A2A3K4 754 aa27.4■■□□□ 1.98
POLR2B-204ENST00000433463 IRX5P78411 483 aaPredicted RBP27.4■■□□□ 1.98
POLR2B-204ENST00000433463 IMMTQ16891 758 aaKnown RBP27.4■■□□□ 1.98
POLR2B-204ENST00000433463 GPATCH4Q5T3I0 446 aaKnown RBP27.4■■□□□ 1.98
POLR2B-204ENST00000433463 FAM109BQ6ICB4 259 aaPredicted RBP27.4■■□□□ 1.98
POLR2B-204ENST00000433463 MTMR10Q9NXD2 777 aa27.4■■□□□ 1.98
POLR2B-204ENST00000433463 NEDD4P46934 1319 aa27.4■■□□□ 1.98
POLR2B-204ENST00000433463 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.39■■□□□ 1.98
POLR2B-204ENST00000433463 ZEB2O60315 1214 aa27.39■■□□□ 1.98
POLR2B-204ENST00000433463 KDM4AO75164 1064 aa27.39■■□□□ 1.98
POLR2B-204ENST00000433463 SNHG28P0DPA3 235 aa27.39■■□□□ 1.98
POLR2B-204ENST00000433463 NKX3-2P78367 333 aa27.39■■□□□ 1.98
POLR2B-204ENST00000433463 C9orf50Q5SZB4 431 aa27.39■■□□□ 1.98
POLR2B-204ENST00000433463 EEPD1Q7L9B9 569 aa27.39■■□□□ 1.98
POLR2B-204ENST00000433463 SLC17A8Q8NDX2 589 aa27.39■■□□□ 1.98
POLR2B-204ENST00000433463 VTA1Q9NP79 307 aa27.39■■□□□ 1.98
POLR2B-204ENST00000433463 LOC102724159A0A0B4J2E5 919 aa27.38■■□□□ 1.97
POLR2B-204ENST00000433463 ARVCFO00192 962 aa27.38■■□□□ 1.97
POLR2B-204ENST00000433463 BEX3Q00994 111 aa27.38■■□□□ 1.97
POLR2B-204ENST00000433463 FPGSQ05932 587 aa27.38■■□□□ 1.97
POLR2B-204ENST00000433463 PWP2Q15269 919 aaKnown RBP27.38■■□□□ 1.97
POLR2B-204ENST00000433463 TLK2Q86UE8 772 aa27.38■■□□□ 1.97
POLR2B-204ENST00000433463 MPHOSPH6Q99547 160 aaKnown RBP27.38■■□□□ 1.97
POLR2B-204ENST00000433463 KAT14Q9H8E8 782 aa27.38■■□□□ 1.97
POLR2B-204ENST00000433463 GNEQ9Y223 722 aaKnown RBP27.38■■□□□ 1.97
POLR2B-204ENST00000433463 STXBP5LQ9Y2K9 1186 aa27.38■■□□□ 1.97
POLR2B-204ENST00000433463 TLR3O15455 904 aaKnown RBP27.37■■□□□ 1.97
POLR2B-204ENST00000433463 DYNC1LI2O43237 492 aaPredicted RBP27.37■■□□□ 1.97
POLR2B-204ENST00000433463 CABYRO75952 493 aa27.37■■□□□ 1.97
POLR2B-204ENST00000433463 ITGB8P26012 769 aa27.37■■□□□ 1.97
POLR2B-204ENST00000433463 CDK7P50613 346 aa27.37■■□□□ 1.97
POLR2B-204ENST00000433463 RNF207Q6ZRF8 634 aa27.37■■□□□ 1.97
POLR2B-204ENST00000433463 KIAA1211Q6ZU35 1233 aa27.37■■□□□ 1.97
POLR2B-204ENST00000433463 FBXO16Q8IX29 292 aaPredicted RBP27.37■■□□□ 1.97
POLR2B-204ENST00000433463 PURBQ96QR8 312 aaKnown RBP27.37■■□□□ 1.97
POLR2B-204ENST00000433463 KRT23Q9C075 422 aa27.37■■□□□ 1.97
POLR2B-204ENST00000433463 Q9Y3F1 56 aa27.37■■□□□ 1.97
POLR2B-204ENST00000433463 ASTN1O14525 1302 aa27.37■■□□□ 1.97
POLR2B-204ENST00000433463 NFIBO00712 420 aa27.36■■□□□ 1.97
POLR2B-204ENST00000433463 SMPD1P17405 629 aa27.36■■□□□ 1.97
POLR2B-204ENST00000433463 CALML3P27482 149 aa27.36■■□□□ 1.97
POLR2B-204ENST00000433463 FSCN1Q16658 493 aaKnown RBP27.36■■□□□ 1.97
POLR2B-204ENST00000433463 ZNF697Q5TEC3 545 aa27.36■■□□□ 1.97
POLR2B-204ENST00000433463 TAPT1Q6NXT6 567 aa27.36■■□□□ 1.97
POLR2B-204ENST00000433463 PNMA1Q8ND90 353 aa27.36■■□□□ 1.97
POLR2B-204ENST00000433463 MORC4Q8TE76 937 aa27.36■■□□□ 1.97
POLR2B-204ENST00000433463 PDGFCQ9NRA1 345 aa27.36■■□□□ 1.97
POLR2B-204ENST00000433463 WDR19Q8NEZ3 1342 aa27.36■■□□□ 1.97
POLR2B-204ENST00000433463 B4E1Z4 1266 aa27.35■■□□□ 1.97
POLR2B-204ENST00000433463 CTAGE5O15320 804 aa27.35■■□□□ 1.97
POLR2B-204ENST00000433463 TIMP1P01033 207 aa27.35■■□□□ 1.97
POLR2B-204ENST00000433463 GOLGA8HP0CJ92 632 aa27.35■■□□□ 1.97
POLR2B-204ENST00000433463 ALDH5A1P51649 535 aaPredicted RBP27.35■■□□□ 1.97
POLR2B-204ENST00000433463 ZSCAN10Q96SZ4 725 aaPredicted RBP27.35■■□□□ 1.97
POLR2B-204ENST00000433463 CNNM2Q9H8M5 875 aa27.35■■□□□ 1.97
POLR2B-204ENST00000433463 DDX49Q9Y6V7 483 aaKnown RBP27.35■■□□□ 1.97
POLR2B-204ENST00000433463 B4DLN1 442 aa27.34■■□□□ 1.97
POLR2B-204ENST00000433463 MRPL12P52815 198 aaKnown RBP27.34■■□□□ 1.97
POLR2B-204ENST00000433463 CXCL17Q6UXB2 119 aa27.34■■□□□ 1.97
POLR2B-204ENST00000433463 CLEC4DQ8WXI8 215 aa27.34■■□□□ 1.97
POLR2B-204ENST00000433463 ANKS1AQ92625 1134 aa27.34■■□□□ 1.97
POLR2B-204ENST00000433463 RNPC3Q96LT9 517 aaKnown RBP27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms