RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 PNMA8AQ86V59 439 aaPredicted RBP12.04□□□□□ -0.48
NEFM-202ENST00000433454 TANGO6Q9C0B7 1094 aa12.04□□□□□ -0.48
NEFM-202ENST00000433454 FBXO28Q9NVF7 368 aa12.04□□□□□ -0.48
NEFM-202ENST00000433454 FAM13BQ9NYF5 915 aa12.04□□□□□ -0.48
NEFM-202ENST00000433454 HPSEQ9Y251 543 aa12.04□□□□□ -0.48
NEFM-202ENST00000433454 ZHX2Q9Y6X8 837 aa12.04□□□□□ -0.48
NEFM-202ENST00000433454 PAPPA2Q9BXP8 1791 aa12.04□□□□□ -0.48
NEFM-202ENST00000433454 OTOFQ9HC10 1997 aa12.04□□□□□ -0.48
NEFM-202ENST00000433454 LAD1O00515 517 aa12.04□□□□□ -0.48
NEFM-202ENST00000433454 GRIN1Q05586 938 aa12.04□□□□□ -0.48
NEFM-202ENST00000433454 ORC2Q13416 577 aaPredicted RBP12.04□□□□□ -0.48
NEFM-202ENST00000433454 LETM2Q2VYF4 491 aa12.04□□□□□ -0.48
NEFM-202ENST00000433454 ARL6IP4Q66PJ3 421 aaKnown RBP12.04□□□□□ -0.48
NEFM-202ENST00000433454 RBM43Q6ZSC3 357 aaKnown RBP12.04□□□□□ -0.48
NEFM-202ENST00000433454 SLF1Q9BQI6 1058 aa12.04□□□□□ -0.48
NEFM-202ENST00000433454 TSPY26PQ9H489 355 aa12.04□□□□□ -0.48
NEFM-202ENST00000433454 EMILIN3Q9NT22 766 aa12.04□□□□□ -0.48
NEFM-202ENST00000433454 CCNT1O60563 726 aaKnown RBP12.03□□□□□ -0.48
NEFM-202ENST00000433454 IREB2P48200 963 aaKnown RBP12.03□□□□□ -0.48
NEFM-202ENST00000433454 MRE11P49959 708 aa12.03□□□□□ -0.48
NEFM-202ENST00000433454 MAP3K9P80192 1104 aa12.03□□□□□ -0.48
NEFM-202ENST00000433454 VGLL4Q14135 290 aa12.03□□□□□ -0.48
NEFM-202ENST00000433454 MCTP2Q6DN12 878 aa12.03□□□□□ -0.48
NEFM-202ENST00000433454 SAMD1Q6SPF0 538 aaPredicted RBP12.03□□□□□ -0.48
NEFM-202ENST00000433454 DLK2Q6UY11 383 aa12.03□□□□□ -0.48
NEFM-202ENST00000433454 TEX2Q8IWB9 1127 aa12.03□□□□□ -0.48
NEFM-202ENST00000433454 PRPF38AQ8NAV1 312 aaKnown RBP12.03□□□□□ -0.48
NEFM-202ENST00000433454 CDCA5Q96FF9 252 aa12.03□□□□□ -0.48
NEFM-202ENST00000433454 CSRNP2Q9H175 543 aa12.03□□□□□ -0.48
NEFM-202ENST00000433454 KCNH3Q9ULD8 1083 aa12.03□□□□□ -0.48
NEFM-202ENST00000433454 CSADQ9Y600 493 aa12.03□□□□□ -0.48
NEFM-202ENST00000433454 C19orf81C9J6K1 198 aa12.03□□□□□ -0.48
NEFM-202ENST00000433454 ZNF202O95125 648 aa12.03□□□□□ -0.48
NEFM-202ENST00000433454 AP3B2Q13367 1082 aa12.03□□□□□ -0.48
NEFM-202ENST00000433454 DGKZQ13574 1117 aa12.03□□□□□ -0.48
NEFM-202ENST00000433454 CCDC174Q6PII3 467 aa12.03□□□□□ -0.48
NEFM-202ENST00000433454 CKAP2LQ8IYA6 745 aa12.03□□□□□ -0.48
NEFM-202ENST00000433454 GRPEL1Q9HAV7 217 aa12.03□□□□□ -0.48
NEFM-202ENST00000433454 VWA3AA6NCI4 1184 aa12.02□□□□□ -0.48
NEFM-202ENST00000433454 USP17L15C9J2P7 530 aa12.02□□□□□ -0.48
NEFM-202ENST00000433454 USP17L13C9JLJ4 530 aa12.02□□□□□ -0.48
NEFM-202ENST00000433454 USP17L11C9JVI0 530 aa12.02□□□□□ -0.48
NEFM-202ENST00000433454 USP17L18D6R9N7 530 aa12.02□□□□□ -0.48
NEFM-202ENST00000433454 USP17L22D6RA61 530 aa12.02□□□□□ -0.48
NEFM-202ENST00000433454 USP17L17D6RBQ6 530 aa12.02□□□□□ -0.48
NEFM-202ENST00000433454 USP17L19D6RCP7 530 aa12.02□□□□□ -0.48
NEFM-202ENST00000433454 USP17L20D6RJB6 530 aa12.02□□□□□ -0.48
NEFM-202ENST00000433454 NEMFO60524 1076 aa12.02□□□□□ -0.48
NEFM-202ENST00000433454 FLOT1O75955 427 aa12.02□□□□□ -0.48
NEFM-202ENST00000433454 USP17L24Q0WX57 530 aa12.02□□□□□ -0.48
NEFM-202ENST00000433454 SPECC1Q5M775 1068 aa12.02□□□□□ -0.48
NEFM-202ENST00000433454 USP17L6PQ6QN14 398 aa12.02□□□□□ -0.48
NEFM-202ENST00000433454 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.02□□□□□ -0.48
NEFM-202ENST00000433454 C12orf42Q96LP6 360 aa12.02□□□□□ -0.48
NEFM-202ENST00000433454 TIGD1Q96MW7 591 aa12.02□□□□□ -0.48
NEFM-202ENST00000433454 SDF4Q9BRK5 362 aa12.02□□□□□ -0.48
NEFM-202ENST00000433454 RPAP3Q9H6T3 665 aaPredicted RBP12.02□□□□□ -0.48
NEFM-202ENST00000433454 SNCAIPQ9Y6H5 919 aa12.02□□□□□ -0.48
NEFM-202ENST00000433454 CCDC192P0DO97 292 aa12.02□□□□□ -0.49
NEFM-202ENST00000433454 HMGCS2P54868 508 aa12.02□□□□□ -0.49
NEFM-202ENST00000433454 C4orf32Q8N8J7 132 aa12.02□□□□□ -0.49
NEFM-202ENST00000433454 POTECB2RU33 542 aa12.01□□□□□ -0.49
NEFM-202ENST00000433454 MEIS2O14770 477 aa12.01□□□□□ -0.49
NEFM-202ENST00000433454 PRPHP41219 470 aa12.01□□□□□ -0.49
NEFM-202ENST00000433454 RBM46Q8TBY0 533 aaKnown RBP12.01□□□□□ -0.49
NEFM-202ENST00000433454 FUCA2Q9BTY2 467 aa12.01□□□□□ -0.49
NEFM-202ENST00000433454 TMOD4Q9NZQ9 345 aa12.01□□□□□ -0.49
NEFM-202ENST00000433454 PPP1R9AQ9ULJ8 1098 aa12.01□□□□□ -0.49
NEFM-202ENST00000433454 ABCB11O95342 1321 aa12.01□□□□□ -0.49
NEFM-202ENST00000433454 MYH7BA7E2Y1 1941 aa12.01□□□□□ -0.49
NEFM-202ENST00000433454 PARP14Q460N5 1801 aa12.01□□□□□ -0.49
NEFM-202ENST00000433454 SPDYE3A6NKU9 549 aa12.01□□□□□ -0.49
NEFM-202ENST00000433454 PIK3CDO00329 1044 aa12.01□□□□□ -0.49
NEFM-202ENST00000433454 FOSP01100 380 aaPredicted RBP12.01□□□□□ -0.49
NEFM-202ENST00000433454 ICAM1P05362 532 aa12.01□□□□□ -0.49
NEFM-202ENST00000433454 TAL1P17542 331 aaPredicted RBP12.01□□□□□ -0.49
NEFM-202ENST00000433454 LONP1P36776 959 aaKnown RBP12.01□□□□□ -0.49
NEFM-202ENST00000433454 DTHD1Q6ZMT9 781 aa12.01□□□□□ -0.49
NEFM-202ENST00000433454 NAP1L4Q99733 375 aaKnown RBP12.01□□□□□ -0.49
NEFM-202ENST00000433454 ANO3Q9BYT9 981 aa12.01□□□□□ -0.49
NEFM-202ENST00000433454 TMEM60Q9H2L4 133 aa12.01□□□□□ -0.49
NEFM-202ENST00000433454 MRPL11Q9Y3B7 192 aaKnown RBP12.01□□□□□ -0.49
NEFM-202ENST00000433454 AFG3L2Q9Y4W6 797 aa12.01□□□□□ -0.49
NEFM-202ENST00000433454 OPLAHO14841 1288 aa12□□□□□ -0.49
NEFM-202ENST00000433454 OR52Z1P0C646 297 aa12□□□□□ -0.49
NEFM-202ENST00000433454 GCFC2P16383 781 aaKnown RBP12□□□□□ -0.49
NEFM-202ENST00000433454 TTLL12Q14166 644 aaPredicted RBP12□□□□□ -0.49
NEFM-202ENST00000433454 LDHDQ86WU2 507 aa12□□□□□ -0.49
NEFM-202ENST00000433454 SYMPKQ92797 1274 aaKnown RBP12□□□□□ -0.49
NEFM-202ENST00000433454 CCPG1Q9ULG6 757 aa12□□□□□ -0.49
NEFM-202ENST00000433454 SMCHD1A6NHR9 2005 aa12□□□□□ -0.49
NEFM-202ENST00000433454 FDX1P10109 184 aa12□□□□□ -0.49
NEFM-202ENST00000433454 PPP4R3AQ6IN85 833 aa12□□□□□ -0.49
NEFM-202ENST00000433454 SASS6Q6UVJ0 657 aa12□□□□□ -0.49
NEFM-202ENST00000433454 ANKRD13AQ8IZ07 590 aa12□□□□□ -0.49
NEFM-202ENST00000433454 RBSNQ9H1K0 784 aa12□□□□□ -0.49
NEFM-202ENST00000433454 SLC38A10Q9HBR0 1119 aa12□□□□□ -0.49
NEFM-202ENST00000433454 PNMA2Q9UL42 364 aa12□□□□□ -0.49
NEFM-202ENST00000433454 CTDP1Q9Y5B0 961 aaPredicted RBP12□□□□□ -0.49
NEFM-202ENST00000433454 PTPRFP10586 1907 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms