RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 MYLIPQ8WY64 445 aa16.85■□□□□ 0.29
SMARCE1-205ENST00000431889 GLT1D1Q96MS3 346 aa16.85■□□□□ 0.29
SMARCE1-205ENST00000431889 CDX2Q99626 313 aaPredicted RBP16.85■□□□□ 0.29
SMARCE1-205ENST00000431889 TMEM47Q9BQJ4 181 aa16.85■□□□□ 0.29
SMARCE1-205ENST00000431889 TSEN34Q9BSV6 310 aaKnown RBP16.85■□□□□ 0.29
SMARCE1-205ENST00000431889 TTYH1Q9H313 450 aaPredicted RBP16.85■□□□□ 0.29
SMARCE1-205ENST00000431889 CPVLQ9H3G5 476 aa16.85■□□□□ 0.29
SMARCE1-205ENST00000431889 HELLSQ9NRZ9 838 aa16.85■□□□□ 0.29
SMARCE1-205ENST00000431889 DCDC2CA8MYV0 355 aa16.84■□□□□ 0.29
SMARCE1-205ENST00000431889 ACRP10323 421 aa16.84■□□□□ 0.29
SMARCE1-205ENST00000431889 TNFAIP2Q03169 654 aa16.84■□□□□ 0.29
SMARCE1-205ENST00000431889 FPGSQ05932 587 aa16.84■□□□□ 0.29
SMARCE1-205ENST00000431889 FAM109BQ6ICB4 259 aaPredicted RBP16.84■□□□□ 0.29
SMARCE1-205ENST00000431889 CXCL17Q6UXB2 119 aa16.84■□□□□ 0.29
SMARCE1-205ENST00000431889 TBC1D10CQ8IV04 446 aa16.84■□□□□ 0.29
SMARCE1-205ENST00000431889 SEMA6BQ9H3T3 888 aa16.84■□□□□ 0.29
SMARCE1-205ENST00000431889 ANAPC4Q9UJX5 808 aa16.84■□□□□ 0.29
SMARCE1-205ENST00000431889 MOXD2PA6NHM9 499 aa16.83■□□□□ 0.28
SMARCE1-205ENST00000431889 NFIBO00712 420 aa16.83■□□□□ 0.28
SMARCE1-205ENST00000431889 DYNC1LI2O43237 492 aaPredicted RBP16.83■□□□□ 0.28
SMARCE1-205ENST00000431889 SMPD1P17405 629 aa16.83■□□□□ 0.28
SMARCE1-205ENST00000431889 GJA9P57773 515 aa16.83■□□□□ 0.28
SMARCE1-205ENST00000431889 HDAC1Q13547 482 aaPredicted RBP16.83■□□□□ 0.28
SMARCE1-205ENST00000431889 CYP39A1Q9NYL5 469 aa16.83■□□□□ 0.28
SMARCE1-205ENST00000431889 SYNPO2Q9UMS6 1093 aa16.83■□□□□ 0.28
SMARCE1-205ENST00000431889 GRXCR1A8MXD5 290 aa16.82■□□□□ 0.28
SMARCE1-205ENST00000431889 GOLGA8HP0CJ92 632 aa16.82■□□□□ 0.28
SMARCE1-205ENST00000431889 PSMC6P62333 389 aa16.82■□□□□ 0.28
SMARCE1-205ENST00000431889 ANKRD33Q7Z3H0 272 aa16.82■□□□□ 0.28
SMARCE1-205ENST00000431889 UPF3AQ9H1J1 476 aaKnown RBP16.82■□□□□ 0.28
SMARCE1-205ENST00000431889 SPC25Q9HBM1 224 aa16.82■□□□□ 0.28
SMARCE1-205ENST00000431889 ORC4O43929 436 aa16.81■□□□□ 0.28
SMARCE1-205ENST00000431889 CSF2RAP15509 400 aa16.81■□□□□ 0.28
SMARCE1-205ENST00000431889 BAATQ14032 418 aaPredicted RBP16.81■□□□□ 0.28
SMARCE1-205ENST00000431889 SYDE2Q5VT97 1194 aa16.81■□□□□ 0.28
SMARCE1-205ENST00000431889 SLC30A10Q6XR72 485 aa16.81■□□□□ 0.28
SMARCE1-205ENST00000431889 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.81■□□□□ 0.28
SMARCE1-205ENST00000431889 TLK2Q86UE8 772 aa16.81■□□□□ 0.28
SMARCE1-205ENST00000431889 EXOC6Q8TAG9 804 aa16.81■□□□□ 0.28
SMARCE1-205ENST00000431889 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.81■□□□□ 0.283e-7■■■□□ 15.4
SMARCE1-205ENST00000431889 NEDD4P46934 1319 aa16.81■□□□□ 0.28
SMARCE1-205ENST00000431889 UMODL1Q5DID0 1318 aa16.81■□□□□ 0.28
SMARCE1-205ENST00000431889 CCDC171Q6TFL3 1326 aa16.81■□□□□ 0.28
SMARCE1-205ENST00000431889 PTPDC1A2A3K4 754 aa16.81■□□□□ 0.28
SMARCE1-205ENST00000431889 ARVCFO00192 962 aa16.81■□□□□ 0.28
SMARCE1-205ENST00000431889 TIMP1P01033 207 aa16.81■□□□□ 0.28
SMARCE1-205ENST00000431889 CALML3P27482 149 aa16.81■□□□□ 0.28
SMARCE1-205ENST00000431889 CST5P28325 142 aaPredicted RBP16.81■□□□□ 0.28
SMARCE1-205ENST00000431889 CYP2C18P33260 490 aa16.81■□□□□ 0.28
SMARCE1-205ENST00000431889 CDK7P50613 346 aa16.81■□□□□ 0.28
SMARCE1-205ENST00000431889 ALX1Q15699 326 aa16.81■□□□□ 0.28
SMARCE1-205ENST00000431889 TAPT1Q6NXT6 567 aa16.81■□□□□ 0.28
SMARCE1-205ENST00000431889 C16orf59Q7L2K0 433 aa16.81■□□□□ 0.28
SMARCE1-205ENST00000431889 PCSK9Q8NBP7 692 aaKnown RBP16.81■□□□□ 0.28
SMARCE1-205ENST00000431889 DCAF4Q8WV16 495 aa16.81■□□□□ 0.28
SMARCE1-205ENST00000431889 RANBP17Q9H2T7 1088 aaKnown RBP16.81■□□□□ 0.28
SMARCE1-205ENST00000431889 TBX21Q9UL17 535 aa16.81■□□□□ 0.28
SMARCE1-205ENST00000431889 A0A0U1RQG5 324 aaPredicted RBP16.8■□□□□ 0.28
SMARCE1-205ENST00000431889 ICAM1P05362 532 aa16.8■□□□□ 0.28
SMARCE1-205ENST00000431889 FDX1P10109 184 aa16.8■□□□□ 0.28
SMARCE1-205ENST00000431889 TOP1P11387 765 aaKnown RBP16.8■□□□□ 0.28
SMARCE1-205ENST00000431889 SDSP20132 328 aa16.8■□□□□ 0.28
SMARCE1-205ENST00000431889 CWC27Q6UX04 472 aaKnown RBP16.8■□□□□ 0.28
SMARCE1-205ENST00000431889 KIAA1211Q6ZU35 1233 aa16.8■□□□□ 0.28
SMARCE1-205ENST00000431889 GNEQ9Y223 722 aaKnown RBP16.8■□□□□ 0.28
SMARCE1-205ENST00000431889 ASB14A6NK59 587 aa16.79■□□□□ 0.28
SMARCE1-205ENST00000431889 PLA2G6O60733 806 aa16.79■□□□□ 0.28
SMARCE1-205ENST00000431889 FGRP09769 529 aa16.79■□□□□ 0.28
SMARCE1-205ENST00000431889 PDHBP11177 359 aa16.79■□□□□ 0.28
SMARCE1-205ENST00000431889 PBX2P40425 430 aa16.79■□□□□ 0.28
SMARCE1-205ENST00000431889 NOVP48745 357 aa16.79■□□□□ 0.28
SMARCE1-205ENST00000431889 FSCN1Q16658 493 aaKnown RBP16.79■□□□□ 0.28
SMARCE1-205ENST00000431889 TKFCQ3LXA3 575 aa16.79■□□□□ 0.28
SMARCE1-205ENST00000431889 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.79■□□□□ 0.28
SMARCE1-205ENST00000431889 FAM126BQ8IXS8 530 aa16.79■□□□□ 0.28
SMARCE1-205ENST00000431889 TOX2Q96NM4 488 aa16.79■□□□□ 0.28
SMARCE1-205ENST00000431889 UBA5Q9GZZ9 404 aa16.79■□□□□ 0.28
SMARCE1-205ENST00000431889 TRPV6Q9H1D0 765 aa16.79■□□□□ 0.28
SMARCE1-205ENST00000431889 GRIN2DO15399 1336 aa16.79■□□□□ 0.28
SMARCE1-205ENST00000431889 ELP1O95163 1332 aa16.79■□□□□ 0.28
SMARCE1-205ENST00000431889 CCL23P55773 120 aa16.78■□□□□ 0.28
SMARCE1-205ENST00000431889 SMAD3P84022 425 aaKnown RBP16.78■□□□□ 0.28
SMARCE1-205ENST00000431889 USH1GQ495M9 461 aa16.78■□□□□ 0.28
SMARCE1-205ENST00000431889 AKNAD1Q5T1N1 836 aa16.78■□□□□ 0.28
SMARCE1-205ENST00000431889 MFSD6Q6ZSS7 791 aa16.78■□□□□ 0.28
SMARCE1-205ENST00000431889 CHD1LQ86WJ1 897 aa16.78■□□□□ 0.28
SMARCE1-205ENST00000431889 PLEKHM2Q8IWE5 1019 aa16.78■□□□□ 0.28
SMARCE1-205ENST00000431889 AP5M1Q9H0R1 490 aa16.78■□□□□ 0.28
SMARCE1-205ENST00000431889 ALDH5A1P51649 535 aaPredicted RBP16.77■□□□□ 0.28
SMARCE1-205ENST00000431889 GRIN2CQ14957 1233 aa16.77■□□□□ 0.28
SMARCE1-205ENST00000431889 PPP4R3BQ5MIZ7 849 aa16.77■□□□□ 0.28
SMARCE1-205ENST00000431889 MFSD5Q6N075 450 aa16.77■□□□□ 0.28
SMARCE1-205ENST00000431889 MAFAQ8NHW3 353 aaPredicted RBP16.77■□□□□ 0.28
SMARCE1-205ENST00000431889 CLEC4DQ8WXI8 215 aa16.77■□□□□ 0.28
SMARCE1-205ENST00000431889 ITGA7Q13683 1181 aa16.77■□□□□ 0.27
SMARCE1-205ENST00000431889 TMEM240Q5SV17 173 aa16.77■□□□□ 0.27
SMARCE1-205ENST00000431889 ZNF365Q70YC5 407 aa16.77■□□□□ 0.27
SMARCE1-205ENST00000431889 SMC5Q8IY18 1101 aa16.77■□□□□ 0.27
SMARCE1-205ENST00000431889 COPS5Q92905 334 aa16.77■□□□□ 0.27
SMARCE1-205ENST00000431889 COL25A1Q9BXS0 654 aaPredicted RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms