RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 TMEM52Q8NDY8 209 aa7.86□□□□□ -1.15
PTPN4-204ENST00000431283 ADCY4Q8NFM4 1077 aa7.86□□□□□ -1.15
PTPN4-204ENST00000431283 HAUS7Q99871 368 aa7.86□□□□□ -1.15
PTPN4-204ENST00000431283 SRRTQ9BXP5 876 aaKnown RBP7.86□□□□□ -1.15
PTPN4-204ENST00000431283 DBR1Q9UK59 544 aaKnown RBP7.86□□□□□ -1.15
PTPN4-204ENST00000431283 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.86□□□□□ -1.15
PTPN4-204ENST00000431283 FGF10O15520 208 aaPredicted RBP7.85□□□□□ -1.15
PTPN4-204ENST00000431283 SASH1O94885 1247 aa7.85□□□□□ -1.15
PTPN4-204ENST00000431283 PFKLP17858 780 aa7.85□□□□□ -1.15
PTPN4-204ENST00000431283 SOX9P48436 509 aa7.85□□□□□ -1.15
PTPN4-204ENST00000431283 MAPKAPK2P49137 400 aa7.85□□□□□ -1.15
PTPN4-204ENST00000431283 MVKQ03426 396 aa7.85□□□□□ -1.15
PTPN4-204ENST00000431283 RPTNQ6XPR3 784 aa7.85□□□□□ -1.15
PTPN4-204ENST00000431283 HOMEZQ8IX15 550 aa7.85□□□□□ -1.15
PTPN4-204ENST00000431283 C19orf47Q8N9M1 422 aaKnown RBP7.85□□□□□ -1.15
PTPN4-204ENST00000431283 PANK1Q8TE04 598 aa7.85□□□□□ -1.15
PTPN4-204ENST00000431283 PTCHD1Q96NR3 888 aa7.85□□□□□ -1.15
PTPN4-204ENST00000431283 FCRL3Q96P31 734 aaPredicted RBP7.85□□□□□ -1.15
PTPN4-204ENST00000431283 PDLIM7Q9NR12 457 aa7.85□□□□□ -1.15
PTPN4-204ENST00000431283 L1CAMP32004 1257 aa7.84□□□□□ -1.15
PTPN4-204ENST00000431283 CBX2Q14781 532 aaPredicted RBP7.84□□□□□ -1.15
PTPN4-204ENST00000431283 NT5DC4Q86YG4 428 aa7.84□□□□□ -1.15
PTPN4-204ENST00000431283 LTBP3Q9NS15 1303 aa7.83□□□□□ -1.16
PTPN4-204ENST00000431283 CYBBP04839 570 aa7.83□□□□□ -1.16
PTPN4-204ENST00000431283 IFNGR1P15260 489 aa7.83□□□□□ -1.16
PTPN4-204ENST00000431283 HOXA5P20719 270 aa7.83□□□□□ -1.16
PTPN4-204ENST00000431283 GIPRP48546 466 aa7.83□□□□□ -1.16
PTPN4-204ENST00000431283 CORO7P57737 925 aa7.83□□□□□ -1.16
PTPN4-204ENST00000431283 TARBP2Q15633 366 aaKnown RBP7.83□□□□□ -1.16
PTPN4-204ENST00000431283 PLEKHN1Q494U1 663 aaPredicted RBP7.83□□□□□ -1.16
PTPN4-204ENST00000431283 EEF1DP3Q658K8 133 aa7.83□□□□□ -1.16
PTPN4-204ENST00000431283 PAQR3Q6TCH7 311 aa7.83□□□□□ -1.16
PTPN4-204ENST00000431283 CABP7Q86V35 215 aa7.83□□□□□ -1.16
PTPN4-204ENST00000431283 NLGN1Q8N2Q7 840 aa7.83□□□□□ -1.16
PTPN4-204ENST00000431283 MRRFQ96E11 262 aaKnown RBP7.83□□□□□ -1.16
PTPN4-204ENST00000431283 SUGT1Q9Y2Z0 365 aa7.83□□□□□ -1.16
PTPN4-204ENST00000431283 IRS4O14654 1257 aaPredicted RBP7.82□□□□□ -1.16
PTPN4-204ENST00000431283 CBFA2T2O43439 604 aa7.82□□□□□ -1.16
PTPN4-204ENST00000431283 BUB1BO60566 1050 aaPredicted RBP7.82□□□□□ -1.16
PTPN4-204ENST00000431283 TACR1P25103 407 aa7.82□□□□□ -1.16
PTPN4-204ENST00000431283 SEPHS1P49903 392 aa7.82□□□□□ -1.16
PTPN4-204ENST00000431283 NCKAP1LP55160 1127 aa7.82□□□□□ -1.16
PTPN4-204ENST00000431283 RBM10P98175 930 aaKnown RBP7.82□□□□□ -1.16
PTPN4-204ENST00000431283 METTL16Q86W50 562 aaKnown RBP7.82□□□□□ -1.16
PTPN4-204ENST00000431283 MARCH10Q8NA82 808 aaPredicted RBP7.82□□□□□ -1.16
PTPN4-204ENST00000431283 RASGRP4Q8TDF6 673 aa7.82□□□□□ -1.16
PTPN4-204ENST00000431283 DACT3Q96B18 629 aaPredicted RBP7.82□□□□□ -1.16
PTPN4-204ENST00000431283 PWWP2AQ96N64 755 aa7.82□□□□□ -1.16
PTPN4-204ENST00000431283 PCDHB10Q9UN67 800 aa7.82□□□□□ -1.16
PTPN4-204ENST00000431283 A0A1W2PQH9 124 aa7.81□□□□□ -1.16
PTPN4-204ENST00000431283 B8ZZF3 427 aa7.81□□□□□ -1.16
PTPN4-204ENST00000431283 EPHX1P07099 455 aa7.81□□□□□ -1.16
PTPN4-204ENST00000431283 MSL3P1P0C860 447 aa7.81□□□□□ -1.16
PTPN4-204ENST00000431283 NASPP49321 788 aaPredicted RBP7.81□□□□□ -1.16
PTPN4-204ENST00000431283 CEBPAP49715 358 aaPredicted RBP7.81□□□□□ -1.16
PTPN4-204ENST00000431283 ZNF200P98182 395 aaPredicted RBP7.81□□□□□ -1.16
PTPN4-204ENST00000431283 C9orf131Q5VYM1 1079 aa7.81□□□□□ -1.16
PTPN4-204ENST00000431283 RCSD1Q6JBY9 416 aa7.81□□□□□ -1.16
PTPN4-204ENST00000431283 IGDCC3Q8IVU1 814 aa7.81□□□□□ -1.16
PTPN4-204ENST00000431283 FAN1Q9Y2M0 1017 aa7.81□□□□□ -1.16
PTPN4-204ENST00000431283 F8W031 263 aaPredicted RBP7.8□□□□□ -1.16
PTPN4-204ENST00000431283 STXBP3O00186 592 aa7.8□□□□□ -1.16
PTPN4-204ENST00000431283 SRGAP3O43295 1099 aa7.8□□□□□ -1.16
PTPN4-204ENST00000431283 TRIM13O60858 407 aa7.8□□□□□ -1.16
PTPN4-204ENST00000431283 DBHP09172 617 aa7.8□□□□□ -1.16
PTPN4-204ENST00000431283 HDLBPQ00341 1268 aaKnown RBP7.8□□□□□ -1.16
PTPN4-204ENST00000431283 AMPD2Q01433 879 aa7.8□□□□□ -1.16
PTPN4-204ENST00000431283 DPY19L1Q2PZI1 675 aa7.8□□□□□ -1.16
PTPN4-204ENST00000431283 FAM129CQ86XR2 697 aa7.8□□□□□ -1.16
PTPN4-204ENST00000431283 SP8Q8IXZ3 490 aa7.8□□□□□ -1.16
PTPN4-204ENST00000431283 RELTQ969Z4 430 aa7.8□□□□□ -1.16
PTPN4-204ENST00000431283 FGD4Q96M96 766 aa7.8□□□□□ -1.16
PTPN4-204ENST00000431283 KCNC2Q96PR1 638 aa7.8□□□□□ -1.16
PTPN4-204ENST00000431283 KLHL25Q9H0H3 589 aa7.8□□□□□ -1.16
PTPN4-204ENST00000431283 CCSER2Q9H7U1 834 aa7.8□□□□□ -1.16
PTPN4-204ENST00000431283 PCDHA5Q9Y5H7 936 aa7.8□□□□□ -1.16
PTPN4-204ENST00000431283 PRRG2O14669 202 aa7.79□□□□□ -1.16
PTPN4-204ENST00000431283 ERICH6BQ5W0A0 696 aa7.79□□□□□ -1.16
PTPN4-204ENST00000431283 SEC16BQ96JE7 1060 aa7.79□□□□□ -1.16
PTPN4-204ENST00000431283 INPP5FQ9Y2H2 1132 aa7.79□□□□□ -1.16
PTPN4-204ENST00000431283 TRBV23OR9-2A0A075B6M9 112 aa7.78□□□□□ -1.16
PTPN4-204ENST00000431283 C2orf71A6NGG8 1288 aa7.78□□□□□ -1.16
PTPN4-204ENST00000431283 AURKAO14965 403 aa7.78□□□□□ -1.16
PTPN4-204ENST00000431283 NAT2P11245 290 aa7.78□□□□□ -1.16
PTPN4-204ENST00000431283 GJA8P48165 433 aa7.78□□□□□ -1.16
PTPN4-204ENST00000431283 VMACQ2NL98 169 aa7.78□□□□□ -1.16
PTPN4-204ENST00000431283 TMEFF1Q8IYR6 380 aa7.78□□□□□ -1.16
PTPN4-204ENST00000431283 CRACR2BQ8N4Y2 399 aaPredicted RBP7.78□□□□□ -1.16
PTPN4-204ENST00000431283 NLGN2Q8NFZ4 835 aa7.78□□□□□ -1.16
PTPN4-204ENST00000431283 USP33Q8TEY7 942 aa7.78□□□□□ -1.16
PTPN4-204ENST00000431283 CGGBP1Q9UFW8 167 aaPredicted RBP7.78□□□□□ -1.16
PTPN4-204ENST00000431283 NUDT5Q9UKK9 219 aa7.78□□□□□ -1.16
PTPN4-204ENST00000431283 STRIP2Q9ULQ0 834 aa7.78□□□□□ -1.16
PTPN4-204ENST00000431283 BACE2Q9Y5Z0 518 aa7.78□□□□□ -1.16
PTPN4-204ENST00000431283 NCANO14594 1321 aa7.78□□□□□ -1.16
PTPN4-204ENST00000431283 ANKRD34BA5PLL1 514 aa7.77□□□□□ -1.17
PTPN4-204ENST00000431283 VAMP4O75379 141 aa7.77□□□□□ -1.17
PTPN4-204ENST00000431283 PRR5P85299 388 aa7.77□□□□□ -1.17
PTPN4-204ENST00000431283 GRB10Q13322 594 aa7.77□□□□□ -1.17
PTPN4-204ENST00000431283 NFIXQ14938 502 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms