RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 TRIM43BA6NCK2 446 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 GOLGA8RI6L899 631 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 RIPK2O43353 540 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 KCNH1O95259 989 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 KRT7P08729 469 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 ATXN8OSP0DMR3 200 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 PRLRP16471 622 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 ZNF3P17036 446 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 HNRNPH1P31943 449 aaKnown RBP5.9□□□□□ -1.46
PTPN4-203ENST00000430976 MASP1P48740 699 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 ZBTB16Q05516 673 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 ACTN3Q08043 901 aaPredicted RBP5.9□□□□□ -1.46
PTPN4-203ENST00000430976 VAC14Q08AM6 782 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 LRRC74AQ0VAA2 488 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 ODF2Q5BJF6 829 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 SWSAP1Q6NVH7 229 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 LSM14AQ8ND56 463 aaKnown RBP5.9□□□□□ -1.46
PTPN4-203ENST00000430976 SLAIN1Q8ND83 568 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 KLHDC4Q8TBB5 520 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 C1orf74Q96LT6 269 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 PSKH2Q96QS6 385 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 COQ7Q99807 217 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 SIKE1Q9BRV8 207 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 CCSER1Q9C0I3 900 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 C12orf4Q9NQ89 552 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 RNF19AQ9NV58 838 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 PSD3Q9NYI0 1048 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.9□□□□□ -1.46
PTPN4-203ENST00000430976 DNAI1Q9UI46 699 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 CHUKO15111 745 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 TSPAN1O60635 241 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 MYL6BP14649 208 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 PRKACBP22694 351 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 OLR1P78380 273 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 DR1Q01658 176 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 GNA13Q14344 377 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 KRT32Q14532 448 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 PKN1Q16512 942 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 C8orf34Q49A92 452 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 IFT74Q96LB3 600 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 PLVAPQ9BX97 442 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 NRDE2Q9H7Z3 1164 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 PLEKHA5Q9HAU0 1116 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 WDR6Q9NNW5 1121 aaKnown RBP5.9□□□□□ -1.46
PTPN4-203ENST00000430976 GALNT8Q9NY28 637 aa5.9□□□□□ -1.46
PTPN4-203ENST00000430976 MACROD2A1Z1Q3 448 aa5.9□□□□□ -1.47
PTPN4-203ENST00000430976 NVLO15381 856 aaKnown RBP5.9□□□□□ -1.47
PTPN4-203ENST00000430976 GNAT1P11488 350 aa5.9□□□□□ -1.47
PTPN4-203ENST00000430976 ACTN1P12814 892 aa5.9□□□□□ -1.47
PTPN4-203ENST00000430976 GBP1P32455 592 aa5.9□□□□□ -1.47
PTPN4-203ENST00000430976 PLCD1P51178 756 aa5.9□□□□□ -1.47
PTPN4-203ENST00000430976 GSTO1P78417 241 aa5.9□□□□□ -1.47
PTPN4-203ENST00000430976 CRY1Q16526 586 aa5.9□□□□□ -1.47
PTPN4-203ENST00000430976 TPD52L1Q16890 204 aaPredicted RBP5.9□□□□□ -1.47
PTPN4-203ENST00000430976 PROSER3Q2NL68 480 aa5.9□□□□□ -1.47
PTPN4-203ENST00000430976 C16orf54Q6UWD8 224 aa5.9□□□□□ -1.47
PTPN4-203ENST00000430976 ZNF365Q70YC5 407 aa5.9□□□□□ -1.47
PTPN4-203ENST00000430976 AGR3Q8TD06 166 aa5.9□□□□□ -1.47
PTPN4-203ENST00000430976 STK32AQ8WU08 396 aa5.9□□□□□ -1.47
PTPN4-203ENST00000430976 RBM41Q96IZ5 413 aaKnown RBP5.9□□□□□ -1.47
PTPN4-203ENST00000430976 CABS1Q96KC9 395 aa5.9□□□□□ -1.47
PTPN4-203ENST00000430976 MXD3Q9BW11 206 aa5.9□□□□□ -1.47
PTPN4-203ENST00000430976 OSBPL5Q9H0X9 879 aaPredicted RBP5.9□□□□□ -1.47
PTPN4-203ENST00000430976 ZNF446Q9NWS9 450 aa5.9□□□□□ -1.47
PTPN4-203ENST00000430976 ARHGEF38Q9NXL2 777 aa5.9□□□□□ -1.47
PTPN4-203ENST00000430976 CYTH4Q9UIA0 394 aa5.9□□□□□ -1.47
PTPN4-203ENST00000430976 PNMA3Q9UL41 463 aa5.9□□□□□ -1.47
PTPN4-203ENST00000430976 SEC24BO95487 1268 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 HEXBP07686 556 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 FGFR4P22455 802 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 S100A5P33763 92 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 EVI2BP34910 448 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 MAPK8P45983 427 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 SULT1E1P49888 294 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 GJA9P57773 515 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 MXRA7P84157 204 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 SHROOM1Q2M3G4 852 aaPredicted RBP5.89□□□□□ -1.47
PTPN4-203ENST00000430976 ARHGAP29Q52LW3 1261 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 CFAP157Q5JU67 520 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 ANGPTL8Q6UXH0 198 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 RGS9BPQ6ZS82 235 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 LPCAT2Q7L5N7 544 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 SH3GL2Q99962 352 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 ZBED2Q9BTP6 218 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 MRPL9Q9BYD2 267 aaKnown RBP5.89□□□□□ -1.47
PTPN4-203ENST00000430976 EVI5O60447 810 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 TACC1O75410 805 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 PRKAR2AP13861 404 aaKnown RBP5.89□□□□□ -1.47
PTPN4-203ENST00000430976 ZKSCAN1P17029 563 aaPredicted RBP5.89□□□□□ -1.47
PTPN4-203ENST00000430976 HSPA6P17066 643 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 ST5P78524 1137 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 PDIA5Q14554 519 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 FAM133BQ5BKY9 247 aaKnown RBP5.89□□□□□ -1.47
PTPN4-203ENST00000430976 GRAMD2AQ8IUY3 354 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 SYTL1Q8IYJ3 562 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 LRRC47Q8N1G4 583 aaKnown RBP5.89□□□□□ -1.47
PTPN4-203ENST00000430976 DTNBP1Q96EV8 351 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 ADAM33Q9BZ11 813 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 CCDC113Q9H0I3 377 aa5.89□□□□□ -1.47
PTPN4-203ENST00000430976 GBP3Q9H0R5 595 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms