RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 DPCR1Q3MIW9 517 aa16.23■□□□□ 0.19
CALD1-207ENST00000430085 BTNL9Q6UXG8 535 aa16.23■□□□□ 0.19
CALD1-207ENST00000430085 TEPSINQ96N21 525 aa16.23■□□□□ 0.19
CALD1-207ENST00000430085 AMNQ9BXJ7 453 aa16.23■□□□□ 0.19
CALD1-207ENST00000430085 IQCB1Q15051 598 aa16.22■□□□□ 0.19
CALD1-207ENST00000430085 UBE2SQ16763 222 aa16.22■□□□□ 0.19
CALD1-207ENST00000430085 L3MBTL3Q96JM7 780 aaPredicted RBP16.22■□□□□ 0.19
CALD1-207ENST00000430085 DEFB129Q9H1M3 183 aa16.22■□□□□ 0.19
CALD1-207ENST00000430085 TMEM60Q9H2L4 133 aa16.22■□□□□ 0.19
CALD1-207ENST00000430085 FOXN1O15353 648 aa16.21■□□□□ 0.19
CALD1-207ENST00000430085 ASTN2O75129 1339 aaPredicted RBP16.21■□□□□ 0.19
CALD1-207ENST00000430085 OR52Z1P0C646 297 aa16.21■□□□□ 0.19
CALD1-207ENST00000430085 SLFN14P0C7P3 912 aa16.21■□□□□ 0.19
CALD1-207ENST00000430085 MDM2Q00987 491 aaPredicted RBP16.21■□□□□ 0.19
CALD1-207ENST00000430085 FBXO11Q86XK2 927 aa16.21■□□□□ 0.19
CALD1-207ENST00000430085 IQUBQ8NA54 791 aa16.21■□□□□ 0.19
CALD1-207ENST00000430085 VCPKMTQ9H867 229 aa16.21■□□□□ 0.19
CALD1-207ENST00000430085 GPRC5DQ9NZD1 345 aa16.21■□□□□ 0.19
CALD1-207ENST00000430085 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.21■□□□□ 0.19
CALD1-207ENST00000430085 PCDHA5Q9Y5H7 936 aa16.21■□□□□ 0.19
CALD1-207ENST00000430085 A0A087X0B3 334 aa16.21■□□□□ 0.19
CALD1-207ENST00000430085 POTECB2RU33 542 aa16.21■□□□□ 0.19
CALD1-207ENST00000430085 PTMAP06454 111 aaKnown RBP16.21■□□□□ 0.19
CALD1-207ENST00000430085 CLK2P49760 499 aaKnown RBP16.21■□□□□ 0.19
CALD1-207ENST00000430085 SNAP25P60880 206 aa16.21■□□□□ 0.19
CALD1-207ENST00000430085 ZYXQ15942 572 aaKnown RBP16.21■□□□□ 0.19
CALD1-207ENST00000430085 FAM83BQ5T0W9 1011 aa16.21■□□□□ 0.19
CALD1-207ENST00000430085 ISM2Q6H9L7 571 aa16.21■□□□□ 0.19
CALD1-207ENST00000430085 SMARCE1Q969G3 411 aa16.21■□□□□ 0.19
CALD1-207ENST00000430085 FEZ1Q99689 392 aa16.21■□□□□ 0.19
CALD1-207ENST00000430085 BPIFA3Q9BQP9 254 aa16.21■□□□□ 0.19
CALD1-207ENST00000430085 PRR12Q9ULL5 1215 aa16.21■□□□□ 0.19
CALD1-207ENST00000430085 PHF20L1A8MW92 1017 aa16.2■□□□□ 0.18
CALD1-207ENST00000430085 EPS15P42566 896 aa16.2■□□□□ 0.18
CALD1-207ENST00000430085 APOBEC3FQ8IUX4 373 aaKnown RBP16.2■□□□□ 0.18
CALD1-207ENST00000430085 DHX40Q8IX18 779 aaKnown RBP16.2■□□□□ 0.18
CALD1-207ENST00000430085 RASSF8Q8NHQ8 419 aa16.2■□□□□ 0.18
CALD1-207ENST00000430085 RRAGCQ9HB90 399 aa16.2■□□□□ 0.18
CALD1-207ENST00000430085 NMRK2Q9NPI5 230 aa16.2■□□□□ 0.18
CALD1-207ENST00000430085 SMC2O95347 1197 aa16.19■□□□□ 0.18
CALD1-207ENST00000430085 LMOD1P29536 600 aaPredicted RBP16.19■□□□□ 0.18
CALD1-207ENST00000430085 TRAF1Q13077 416 aa16.19■□□□□ 0.18
CALD1-207ENST00000430085 USH1GQ495M9 461 aa16.19■□□□□ 0.18
CALD1-207ENST00000430085 HS1BP3Q53T59 392 aa16.19■□□□□ 0.18
CALD1-207ENST00000430085 KIAA1755Q5JYT7 1200 aa16.19■□□□□ 0.18
CALD1-207ENST00000430085 GRAMD1CQ8IYS0 662 aa16.19■□□□□ 0.18
CALD1-207ENST00000430085 AOPEPQ8N6M6 819 aa16.19■□□□□ 0.18
CALD1-207ENST00000430085 CHURC1Q8WUH1 139 aa16.19■□□□□ 0.18
CALD1-207ENST00000430085 CCDC39Q9UFE4 941 aa16.19■□□□□ 0.18
CALD1-207ENST00000430085 AP5Z1O43299 807 aa16.19■□□□□ 0.18
CALD1-207ENST00000430085 PRR29P0C7W0 189 aa16.19■□□□□ 0.18
CALD1-207ENST00000430085 UBA7P41226 1012 aa16.19■□□□□ 0.18
CALD1-207ENST00000430085 ANGEL2Q5VTE6 544 aaKnown RBP16.19■□□□□ 0.18
CALD1-207ENST00000430085 DCAF15Q66K64 600 aa16.19■□□□□ 0.18
CALD1-207ENST00000430085 HOOK2Q96ED9 719 aa16.19■□□□□ 0.18
CALD1-207ENST00000430085 PAGE5Q96GU1 130 aa16.19■□□□□ 0.18
CALD1-207ENST00000430085 AK8Q96MA6 479 aa16.19■□□□□ 0.18
CALD1-207ENST00000430085 ZNF341Q9BYN7 854 aa16.19■□□□□ 0.18
CALD1-207ENST00000430085 GINM1Q9NU53 330 aa16.19■□□□□ 0.18
CALD1-207ENST00000430085 ATAD5Q96QE3 1844 aa16.19■□□□□ 0.18
CALD1-207ENST00000430085 CTNND1O60716 968 aaKnown RBP16.18■□□□□ 0.18
CALD1-207ENST00000430085 AFMP43652 599 aa16.18■□□□□ 0.18
CALD1-207ENST00000430085 CALCRLQ16602 461 aa16.18■□□□□ 0.18
CALD1-207ENST00000430085 NT5DC1Q5TFE4 455 aa16.18■□□□□ 0.18
CALD1-207ENST00000430085 MCTP2Q6DN12 878 aa16.18■□□□□ 0.18
CALD1-207ENST00000430085 FAM160B2Q86V87 743 aa16.18■□□□□ 0.18
CALD1-207ENST00000430085 POTEDQ86YR6 584 aa16.18■□□□□ 0.18
CALD1-207ENST00000430085 NAP1L4Q99733 375 aaKnown RBP16.18■□□□□ 0.18
CALD1-207ENST00000430085 TRIM5Q9C035 493 aa16.18■□□□□ 0.18
CALD1-207ENST00000430085 SMTNL1A8MU46 457 aa16.17■□□□□ 0.18
CALD1-207ENST00000430085 USP17L15C9J2P7 530 aa16.17■□□□□ 0.18
CALD1-207ENST00000430085 USP17L13C9JLJ4 530 aa16.17■□□□□ 0.18
CALD1-207ENST00000430085 USP17L11C9JVI0 530 aa16.17■□□□□ 0.18
CALD1-207ENST00000430085 USP17L18D6R9N7 530 aa16.17■□□□□ 0.18
CALD1-207ENST00000430085 USP17L22D6RA61 530 aa16.17■□□□□ 0.18
CALD1-207ENST00000430085 USP17L17D6RBQ6 530 aa16.17■□□□□ 0.18
CALD1-207ENST00000430085 USP17L19D6RCP7 530 aa16.17■□□□□ 0.18
CALD1-207ENST00000430085 USP17L20D6RJB6 530 aa16.17■□□□□ 0.18
CALD1-207ENST00000430085 STAT6P42226 847 aa16.17■□□□□ 0.18
CALD1-207ENST00000430085 TPM4P67936 248 aa16.17■□□□□ 0.18
CALD1-207ENST00000430085 USP17L24Q0WX57 530 aa16.17■□□□□ 0.18
CALD1-207ENST00000430085 AP3B2Q13367 1082 aa16.17■□□□□ 0.18
CALD1-207ENST00000430085 NBPF12Q5TAG4 269 aaPredicted RBP16.17■□□□□ 0.18
CALD1-207ENST00000430085 USP17L6PQ6QN14 398 aa16.17■□□□□ 0.18
CALD1-207ENST00000430085 CCDC84Q86UT8 332 aaPredicted RBP16.17■□□□□ 0.18
CALD1-207ENST00000430085 TRIML1Q8N9V2 468 aa16.17■□□□□ 0.18
CALD1-207ENST00000430085 KIFC2Q96AC6 838 aa16.17■□□□□ 0.18
CALD1-207ENST00000430085 GLIS2Q9BZE0 524 aaPredicted RBP16.17■□□□□ 0.18
CALD1-207ENST00000430085 GPBP1L1Q9HC44 474 aaPredicted RBP16.17■□□□□ 0.18
CALD1-207ENST00000430085 MAN1B1Q9UKM7 699 aa16.17■□□□□ 0.18
CALD1-207ENST00000430085 IQCA1LA6NCM1 817 aa16.17■□□□□ 0.18
CALD1-207ENST00000430085 PLA2G6O60733 806 aa16.17■□□□□ 0.18
CALD1-207ENST00000430085 TDP2O95551 362 aa16.17■□□□□ 0.18
CALD1-207ENST00000430085 CDC25AP30304 524 aa16.17■□□□□ 0.18
CALD1-207ENST00000430085 SARSP49591 514 aaKnown RBP16.17■□□□□ 0.18
CALD1-207ENST00000430085 E2F4Q16254 413 aa16.17■□□□□ 0.18
CALD1-207ENST00000430085 TMEM266Q2M3C6 531 aa16.17■□□□□ 0.18
CALD1-207ENST00000430085 PPP4R3AQ6IN85 833 aa16.17■□□□□ 0.18
CALD1-207ENST00000430085 SH3RF1Q7Z6J0 888 aa16.17■□□□□ 0.18
CALD1-207ENST00000430085 TRPM4Q8TD43 1214 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms