RNA–Protein interactions for RNA: ENST00000429899.1

ATG4B-211, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 524 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-211ENST00000429899 PLCD1P51178 756 aa12.08□□□□□ -0.48
ATG4B-211ENST00000429899 G3BP1Q13283 466 aaKnown RBP eCLIP12.08□□□□□ -0.48
ATG4B-211ENST00000429899 OS9Q13438 667 aaPredicted RBP12.08□□□□□ -0.48
ATG4B-211ENST00000429899 MAMDC4Q6UXC1 1216 aa12.08□□□□□ -0.48
ATG4B-211ENST00000429899 CLEC10AQ8IUN9 316 aa12.08□□□□□ -0.48
ATG4B-211ENST00000429899 SIAH1Q8IUQ4 282 aa12.08□□□□□ -0.48
ATG4B-211ENST00000429899 HERC6Q8IVU3 1022 aa12.08□□□□□ -0.48
ATG4B-211ENST00000429899 ATOH1Q92858 354 aaPredicted RBP12.08□□□□□ -0.48
ATG4B-211ENST00000429899 PRRX2Q99811 253 aa12.08□□□□□ -0.48
ATG4B-211ENST00000429899 MUTYHQ9UIF7 546 aa12.08□□□□□ -0.48
ATG4B-211ENST00000429899 AKAP2Q9Y2D5 859 aa12.08□□□□□ -0.48
ATG4B-211ENST00000429899 ASTN1O14525 1302 aa12.08□□□□□ -0.48
ATG4B-211ENST00000429899 LCHNA4D1U4 455 aa12.07□□□□□ -0.48
ATG4B-211ENST00000429899 SOWAHBA6NEL2 793 aa12.07□□□□□ -0.48
ATG4B-211ENST00000429899 ACTN1P12814 892 aa12.07□□□□□ -0.48
ATG4B-211ENST00000429899 IRS1P35568 1242 aa12.07□□□□□ -0.48
ATG4B-211ENST00000429899 ID4P47928 161 aa12.07□□□□□ -0.48
ATG4B-211ENST00000429899 ITGA7Q13683 1181 aa12.07□□□□□ -0.48
ATG4B-211ENST00000429899 ACVR2BQ13705 512 aa12.07□□□□□ -0.48
ATG4B-211ENST00000429899 PUS10Q3MIT2 529 aaKnown RBP12.07□□□□□ -0.48
ATG4B-211ENST00000429899 GORABQ5T7V8 394 aa12.07□□□□□ -0.48
ATG4B-211ENST00000429899 PBXIP1Q96AQ6 731 aa12.07□□□□□ -0.48
ATG4B-211ENST00000429899 UPF3BQ9BZI7 483 aaKnown RBP12.07□□□□□ -0.48
ATG4B-211ENST00000429899 OSBPL3Q9H4L5 887 aa12.07□□□□□ -0.48
ATG4B-211ENST00000429899 FBXO28Q9NVF7 368 aa12.07□□□□□ -0.48
ATG4B-211ENST00000429899 SCN10AQ9Y5Y9 1956 aa12.07□□□□□ -0.48
ATG4B-211ENST00000429899 DNAJC25-GNG10A0A024R161 153 aa12.06□□□□□ -0.48
ATG4B-211ENST00000429899 C19orf67A6NJJ6 358 aa12.06□□□□□ -0.48
ATG4B-211ENST00000429899 MPHOSPH10O00566 681 aaKnown RBP12.06□□□□□ -0.48
ATG4B-211ENST00000429899 CYP2E1P05181 493 aaPredicted RBP12.06□□□□□ -0.48
ATG4B-211ENST00000429899 GSPT1P15170 499 aaKnown RBP12.06□□□□□ -0.48
ATG4B-211ENST00000429899 MX1P20591 662 aa12.06□□□□□ -0.48
ATG4B-211ENST00000429899 STAT3P40763 770 aa12.06□□□□□ -0.48
ATG4B-211ENST00000429899 PSMC6P62333 389 aa12.06□□□□□ -0.48
ATG4B-211ENST00000429899 TNNI3KQ59H18 835 aa12.06□□□□□ -0.48
ATG4B-211ENST00000429899 EP400NLQ6ZTU2 488 aa12.06□□□□□ -0.48
ATG4B-211ENST00000429899 SUGP1Q8IWZ8 645 aaKnown RBP12.06□□□□□ -0.48
ATG4B-211ENST00000429899 MSL3Q8N5Y2 521 aaKnown RBP12.06□□□□□ -0.48
ATG4B-211ENST00000429899 MIGA1Q8NAN2 632 aa12.06□□□□□ -0.48
ATG4B-211ENST00000429899 REPS2Q8NFH8 660 aa12.06□□□□□ -0.48
ATG4B-211ENST00000429899 PHOSPHO2Q8TCD6 241 aa12.06□□□□□ -0.48
ATG4B-211ENST00000429899 EAF2Q96CJ1 260 aaPredicted RBP12.06□□□□□ -0.48
ATG4B-211ENST00000429899 FGD4Q96M96 766 aa12.06□□□□□ -0.48
ATG4B-211ENST00000429899 GPR108Q9NPR9 543 aa12.06□□□□□ -0.48
ATG4B-211ENST00000429899 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.06□□□□□ -0.48
ATG4B-211ENST00000429899 ZBTB47Q9UFB7 747 aaPredicted RBP12.06□□□□□ -0.48
ATG4B-211ENST00000429899 ZNF214Q9UL59 606 aaPredicted RBP12.06□□□□□ -0.48
ATG4B-211ENST00000429899 FPGT-TNNI3KV9GXZ4 949 aa12.06□□□□□ -0.48
ATG4B-211ENST00000429899 MICAL3Q7RTP6 2002 aa12.05□□□□□ -0.48
ATG4B-211ENST00000429899 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.05□□□□□ -0.48
ATG4B-211ENST00000429899 RBAK-RBAKDNI3L0D1 243 aa12.05□□□□□ -0.48
ATG4B-211ENST00000429899 RGS20O76081 388 aa12.05□□□□□ -0.48
ATG4B-211ENST00000429899 PFKMP08237 780 aa12.05□□□□□ -0.48
ATG4B-211ENST00000429899 USP5P45974 858 aa12.05□□□□□ -0.48
ATG4B-211ENST00000429899 PDE1AP54750 535 aa12.05□□□□□ -0.48
ATG4B-211ENST00000429899 NKX3-2P78367 333 aa12.05□□□□□ -0.48
ATG4B-211ENST00000429899 GABPAQ06546 454 aa12.05□□□□□ -0.48
ATG4B-211ENST00000429899 BMP2KLQ5H9B9 411 aa12.05□□□□□ -0.48
ATG4B-211ENST00000429899 TTC22Q5TAA0 569 aa12.05□□□□□ -0.48
ATG4B-211ENST00000429899 ASCL5Q7RTU5 278 aa12.05□□□□□ -0.48
ATG4B-211ENST00000429899 TMCO2Q7Z6W1 182 aaPredicted RBP12.05□□□□□ -0.48
ATG4B-211ENST00000429899 ADHFE1Q8IWW8 467 aa12.05□□□□□ -0.48
ATG4B-211ENST00000429899 CLASRPQ8N2M8 674 aaKnown RBP12.05□□□□□ -0.48
ATG4B-211ENST00000429899 NEK9Q8TD19 979 aa12.05□□□□□ -0.48
ATG4B-211ENST00000429899 KATNBL1Q9H079 304 aa12.05□□□□□ -0.48
ATG4B-211ENST00000429899 SUGCTQ9HAC7 445 aa12.05□□□□□ -0.48
ATG4B-211ENST00000429899 PIH1D3Q9NQM4 214 aaKnown RBP12.05□□□□□ -0.48
ATG4B-211ENST00000429899 TLR7Q9NYK1 1049 aaKnown RBP12.05□□□□□ -0.48
ATG4B-211ENST00000429899 PRKAG3Q9UGI9 489 aa12.05□□□□□ -0.48
ATG4B-211ENST00000429899 GREB1LQ9C091 1923 aaPredicted RBP12.05□□□□□ -0.48
ATG4B-211ENST00000429899 TMEM221A6NGB7 291 aa12.04□□□□□ -0.48
ATG4B-211ENST00000429899 M0R296 226 aa12.04□□□□□ -0.48
ATG4B-211ENST00000429899 VWA5AO00534 786 aa12.04□□□□□ -0.48
ATG4B-211ENST00000429899 UQCRFS1P1P0C7P4 283 aa12.04□□□□□ -0.48
ATG4B-211ENST00000429899 CYP2C9P11712 490 aa12.04□□□□□ -0.48
ATG4B-211ENST00000429899 HERC4Q5GLZ8 1057 aaPredicted RBP12.04□□□□□ -0.48
ATG4B-211ENST00000429899 BMP8AQ7Z5Y6 402 aa12.04□□□□□ -0.48
ATG4B-211ENST00000429899 TTC6Q86TZ1 520 aa12.04□□□□□ -0.48
ATG4B-211ENST00000429899 AACSQ86V21 672 aa12.04□□□□□ -0.48
ATG4B-211ENST00000429899 PI4K2BQ8TCG2 481 aa12.04□□□□□ -0.48
ATG4B-211ENST00000429899 EDAQ92838 391 aa12.04□□□□□ -0.48
ATG4B-211ENST00000429899 DBNLQ9UJU6 430 aaKnown RBP12.04□□□□□ -0.48
ATG4B-211ENST00000429899 FAM50BQ9Y247 325 aa12.04□□□□□ -0.48
ATG4B-211ENST00000429899 RIPK3Q9Y572 518 aa12.04□□□□□ -0.48
ATG4B-211ENST00000429899 TTC41PQ6P2S7 1318 aa12.04□□□□□ -0.48
ATG4B-211ENST00000429899 CYP7A1P22680 504 aa12.03□□□□□ -0.48
ATG4B-211ENST00000429899 C8orf34Q49A92 452 aa12.03□□□□□ -0.48
ATG4B-211ENST00000429899 TSHZ3Q63HK5 1081 aa12.03□□□□□ -0.48
ATG4B-211ENST00000429899 ZBED2Q9BTP6 218 aa12.03□□□□□ -0.48
ATG4B-211ENST00000429899 FTOQ9C0B1 505 aaKnown RBP eCLIP12.03□□□□□ -0.48
ATG4B-211ENST00000429899 ABHD16BQ9H3Z7 469 aa12.03□□□□□ -0.48
ATG4B-211ENST00000429899 VCPKMTQ9H867 229 aa12.03□□□□□ -0.48
ATG4B-211ENST00000429899 ALG13Q9NP73 1137 aaKnown RBP12.03□□□□□ -0.48
ATG4B-211ENST00000429899 TRMT13Q9NUP7 481 aaKnown RBP12.03□□□□□ -0.48
ATG4B-211ENST00000429899 TMX2Q9Y320 296 aa12.03□□□□□ -0.48
ATG4B-211ENST00000429899 DNAH14Q0VDD8 3507 aa12.03□□□□□ -0.48
ATG4B-211ENST00000429899 RALGAPA2Q2PPJ7 1873 aa12.02□□□□□ -0.48
ATG4B-211ENST00000429899 MED19A0JLT2 244 aaPredicted RBP12.02□□□□□ -0.49
ATG4B-211ENST00000429899 H0Y858 1186 aa12.02□□□□□ -0.49
ATG4B-211ENST00000429899 WDR46O15213 610 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms