RNA–Protein interactions for RNA: ENST00000429801.5

NUP98-207, Transcript of nucleoporin 98, humanhuman

TSL 1 (best)

Gene NUP98, Length 2,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-207ENST00000429801 ORC3Q9UBD5 711 aaPredicted RBP9.89□□□□□ -0.83
NUP98-207ENST00000429801 STK36Q9NRP7 1315 aa9.88□□□□□ -0.83
NUP98-207ENST00000429801 FMNL1O95466 1100 aaPredicted RBP9.88□□□□□ -0.83
NUP98-207ENST00000429801 MYBL2P10244 700 aa9.88□□□□□ -0.83
NUP98-207ENST00000429801 PDHBP11177 359 aa9.88□□□□□ -0.83
NUP98-207ENST00000429801 NAT1P18440 290 aa9.88□□□□□ -0.83
NUP98-207ENST00000429801 SYT1P21579 422 aa9.88□□□□□ -0.83
NUP98-207ENST00000429801 AKAP17AQ02040 695 aaKnown RBP9.88□□□□□ -0.83
NUP98-207ENST00000429801 ASPRV1Q53RT3 343 aa9.88□□□□□ -0.83
NUP98-207ENST00000429801 MMS22LQ6ZRQ5 1243 aa9.88□□□□□ -0.83
NUP98-207ENST00000429801 SIAH1Q8IUQ4 282 aa9.88□□□□□ -0.83
NUP98-207ENST00000429801 SCYL3Q8IZE3 742 aa9.88□□□□□ -0.83
NUP98-207ENST00000429801 MSL3Q8N5Y2 521 aaKnown RBP9.88□□□□□ -0.83
NUP98-207ENST00000429801 WASF1Q92558 559 aa9.88□□□□□ -0.83
NUP98-207ENST00000429801 CDCA5Q96FF9 252 aa9.88□□□□□ -0.83
NUP98-207ENST00000429801 MAD2L2Q9UI95 211 aa9.88□□□□□ -0.83
NUP98-207ENST00000429801 POLR2AP24928 1970 aaKnown RBP9.88□□□□□ -0.83
NUP98-207ENST00000429801 PALM3A6NDB9 673 aaPredicted RBP9.88□□□□□ -0.83
NUP98-207ENST00000429801 STX6O43752 255 aa9.88□□□□□ -0.83
NUP98-207ENST00000429801 SNHG28P0DPA3 235 aa9.88□□□□□ -0.83
NUP98-207ENST00000429801 FBXO38Q6PIJ6 1188 aa9.88□□□□□ -0.83
NUP98-207ENST00000429801 LDHDQ86WU2 507 aa9.88□□□□□ -0.83
NUP98-207ENST00000429801 GMCL1P1Q8NEA9 526 aa9.88□□□□□ -0.83
NUP98-207ENST00000429801 ZNF397Q8NF99 534 aaPredicted RBP9.88□□□□□ -0.83
NUP98-207ENST00000429801 PHKBQ93100 1093 aa9.88□□□□□ -0.83
NUP98-207ENST00000429801 SLC26A6Q9BXS9 759 aa9.88□□□□□ -0.83
NUP98-207ENST00000429801 RNF26Q9BY78 433 aaPredicted RBP9.88□□□□□ -0.83
NUP98-207ENST00000429801 GOPCQ9HD26 462 aa9.88□□□□□ -0.83
NUP98-207ENST00000429801 SSC5DA1L4H1 1573 aa9.88□□□□□ -0.83
NUP98-207ENST00000429801 WDR33Q9C0J8 1336 aaKnown RBP9.87□□□□□ -0.83
NUP98-207ENST00000429801 USP17L5A8MUK1 530 aa9.87□□□□□ -0.83
NUP98-207ENST00000429801 USP2O75604 605 aaPredicted RBP9.87□□□□□ -0.83
NUP98-207ENST00000429801 PLEKHA8P1O95397 391 aa9.87□□□□□ -0.83
NUP98-207ENST00000429801 OATP04181 439 aa9.87□□□□□ -0.83
NUP98-207ENST00000429801 FDPSP14324 419 aaKnown RBP9.87□□□□□ -0.83
NUP98-207ENST00000429801 SMARCA1P28370 1054 aa9.87□□□□□ -0.83
NUP98-207ENST00000429801 INPP5BP32019 993 aa9.87□□□□□ -0.83
NUP98-207ENST00000429801 IREB2P48200 963 aaKnown RBP9.87□□□□□ -0.83
NUP98-207ENST00000429801 IRX1P78414 480 aaPredicted RBP9.87□□□□□ -0.83
NUP98-207ENST00000429801 SETDB1Q15047 1291 aa9.87□□□□□ -0.83
NUP98-207ENST00000429801 GPATCH4Q5T3I0 446 aaKnown RBP9.87□□□□□ -0.83
NUP98-207ENST00000429801 AP1ARQ63HQ0 302 aa9.87□□□□□ -0.83
NUP98-207ENST00000429801 USP17L2Q6R6M4 530 aa9.87□□□□□ -0.83
NUP98-207ENST00000429801 CMTR1Q8N1G2 835 aaKnown RBP9.87□□□□□ -0.83
NUP98-207ENST00000429801 CCDC26Q8TAB7 109 aa9.87□□□□□ -0.83
NUP98-207ENST00000429801 DCAF4Q8WV16 495 aa9.87□□□□□ -0.83
NUP98-207ENST00000429801 GLIS2Q9BZE0 524 aaPredicted RBP9.87□□□□□ -0.83
NUP98-207ENST00000429801 TMX2Q9Y320 296 aa9.87□□□□□ -0.83
NUP98-207ENST00000429801 MYH4Q9Y623 1939 aa9.87□□□□□ -0.83
NUP98-207ENST00000429801 KLRF2D3W0D1 207 aa9.87□□□□□ -0.83
NUP98-207ENST00000429801 F5H6K3 240 aa9.87□□□□□ -0.83
NUP98-207ENST00000429801 POLR3GO15318 223 aaPredicted RBP9.87□□□□□ -0.83
NUP98-207ENST00000429801 PRPF3O43395 683 aaKnown RBP9.87□□□□□ -0.83
NUP98-207ENST00000429801 NRDCO43847 1150 aa9.87□□□□□ -0.83
NUP98-207ENST00000429801 DTNBO60941 627 aa9.87□□□□□ -0.83
NUP98-207ENST00000429801 PPFIA3O75145 1194 aa9.87□□□□□ -0.83
NUP98-207ENST00000429801 DEXIO95424 95 aa9.87□□□□□ -0.83
NUP98-207ENST00000429801 SLC1A4P43007 532 aa9.87□□□□□ -0.83
NUP98-207ENST00000429801 KLRC3Q07444 240 aa9.87□□□□□ -0.83
NUP98-207ENST00000429801 ZRSR2Q15696 482 aaKnown RBP9.87□□□□□ -0.83
NUP98-207ENST00000429801 NOL9Q5SY16 702 aaKnown RBP9.87□□□□□ -0.83
NUP98-207ENST00000429801 SLFN13Q68D06 897 aa9.87□□□□□ -0.83
NUP98-207ENST00000429801 STAG2Q8N3U4 1231 aa9.87□□□□□ -0.83
NUP98-207ENST00000429801 SRBD1Q8N5C6 995 aaKnown RBP9.87□□□□□ -0.83
NUP98-207ENST00000429801 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.87□□□□□ -0.83
NUP98-207ENST00000429801 AS3MTQ9HBK9 375 aa9.87□□□□□ -0.83
NUP98-207ENST00000429801 CPSF2Q9P2I0 782 aaKnown RBP9.87□□□□□ -0.83
NUP98-207ENST00000429801 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.87□□□□□ -0.83
NUP98-207ENST00000429801 PYCARDQ9ULZ3 195 aa9.87□□□□□ -0.83
NUP98-207ENST00000429801 V9GYY5 206 aaPredicted RBP9.87□□□□□ -0.83
NUP98-207ENST00000429801 A0A1W2PRG0 241 aa9.86□□□□□ -0.83
NUP98-207ENST00000429801 ANKRD65E5RJM6 399 aa9.86□□□□□ -0.83
NUP98-207ENST00000429801 H3BQV1 296 aa9.86□□□□□ -0.83
NUP98-207ENST00000429801 SMC2O95347 1197 aa9.86□□□□□ -0.83
NUP98-207ENST00000429801 CCNHP51946 323 aaPredicted RBP9.86□□□□□ -0.83
NUP98-207ENST00000429801 MAP3K9P80192 1104 aa9.86□□□□□ -0.83
NUP98-207ENST00000429801 ZNF543Q08ER8 600 aa9.86□□□□□ -0.83
NUP98-207ENST00000429801 FUT2Q10981 343 aa9.86□□□□□ -0.83
NUP98-207ENST00000429801 PRKG1Q13976 671 aa9.86□□□□□ -0.83
NUP98-207ENST00000429801 NOM1Q5C9Z4 860 aaKnown RBP9.86□□□□□ -0.83
NUP98-207ENST00000429801 IFFO2Q5TF58 517 aa9.86□□□□□ -0.83
NUP98-207ENST00000429801 MAP1SQ66K74 1059 aaPredicted RBP9.86□□□□□ -0.83
NUP98-207ENST00000429801 GET4Q7L5D6 327 aaPredicted RBP9.86□□□□□ -0.83
NUP98-207ENST00000429801 KCNV2Q8TDN2 545 aa9.86□□□□□ -0.83
NUP98-207ENST00000429801 ZKSCAN4Q969J2 545 aaPredicted RBP9.86□□□□□ -0.83
NUP98-207ENST00000429801 GMCL1Q96IK5 515 aa9.86□□□□□ -0.83
NUP98-207ENST00000429801 ZNF396Q96N95 335 aaPredicted RBP9.86□□□□□ -0.83
NUP98-207ENST00000429801 BRD1O95696 1058 aa9.86□□□□□ -0.83
NUP98-207ENST00000429801 POTEIP0CG38 1075 aa9.86□□□□□ -0.83
NUP98-207ENST00000429801 POTEJP0CG39 1038 aa9.86□□□□□ -0.83
NUP98-207ENST00000429801 GOLGA8HP0CJ92 632 aa9.86□□□□□ -0.83
NUP98-207ENST00000429801 PTPRAP18433 802 aa9.86□□□□□ -0.83
NUP98-207ENST00000429801 ECE1P42892 770 aa9.86□□□□□ -0.83
NUP98-207ENST00000429801 DLK2Q6UY11 383 aa9.86□□□□□ -0.83
NUP98-207ENST00000429801 ACER1Q8TDN7 264 aa9.86□□□□□ -0.83
NUP98-207ENST00000429801 ALG1Q9BT22 464 aa9.86□□□□□ -0.83
NUP98-207ENST00000429801 SPZ1Q9BXG8 430 aa9.86□□□□□ -0.83
NUP98-207ENST00000429801 SRRTQ9BXP5 876 aaKnown RBP9.86□□□□□ -0.83
NUP98-207ENST00000429801 NMRK2Q9NPI5 230 aa9.86□□□□□ -0.83
NUP98-207ENST00000429801 FZD1Q9UP38 647 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms