RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 SPATA31A3Q5VYP0 1347 aa13.99□□□□□ -0.17
CPNE4-201ENST00000429747 KCNK3O14649 394 aa13.99□□□□□ -0.17
CPNE4-201ENST00000429747 FAM13AO94988 1023 aa13.99□□□□□ -0.17
CPNE4-201ENST00000429747 EIF4A3P38919 411 aaKnown RBP13.99□□□□□ -0.17
CPNE4-201ENST00000429747 CEP85LQ5SZL2 805 aa13.99□□□□□ -0.17
CPNE4-201ENST00000429747 FOXP4Q8IVH2 680 aaPredicted RBP13.99□□□□□ -0.17
CPNE4-201ENST00000429747 CCDC155Q8N6L0 562 aa13.99□□□□□ -0.17
CPNE4-201ENST00000429747 SMCR8Q8TEV9 937 aaPredicted RBP13.99□□□□□ -0.17
CPNE4-201ENST00000429747 PPANQ9NQ55 473 aaKnown RBP13.99□□□□□ -0.17
CPNE4-201ENST00000429747 USP17L3A6NCW0 530 aa13.99□□□□□ -0.17
CPNE4-201ENST00000429747 USP17L4A6NCW7 530 aa13.99□□□□□ -0.17
CPNE4-201ENST00000429747 ERVV-1B6SEH8 477 aa13.99□□□□□ -0.17
CPNE4-201ENST00000429747 STXBP4Q6ZWJ1 553 aa13.99□□□□□ -0.17
CPNE4-201ENST00000429747 HS2ST1Q7LGA3 356 aa13.99□□□□□ -0.17
CPNE4-201ENST00000429747 USP17L1Q7RTZ2 530 aa13.99□□□□□ -0.17
CPNE4-201ENST00000429747 ABCC12Q96J65 1359 aa13.99□□□□□ -0.17
CPNE4-201ENST00000429747 TCHHQ07283 1943 aa13.99□□□□□ -0.17
CPNE4-201ENST00000429747 LGALS16A8MUM7 142 aa13.98□□□□□ -0.17
CPNE4-201ENST00000429747 CCDC172P0C7W6 258 aa13.98□□□□□ -0.17
CPNE4-201ENST00000429747 TRIM10Q9UDY6 481 aa13.98□□□□□ -0.17
CPNE4-201ENST00000429747 E7EVH7 732 aa13.98□□□□□ -0.17
CPNE4-201ENST00000429747 ACTN4O43707 911 aaKnown RBP13.98□□□□□ -0.17
CPNE4-201ENST00000429747 CDHR2Q9BYE9 1310 aa13.98□□□□□ -0.17
CPNE4-201ENST00000429747 TBC1D8O95759 1140 aa13.98□□□□□ -0.17
CPNE4-201ENST00000429747 CSF1RP07333 972 aa13.98□□□□□ -0.17
CPNE4-201ENST00000429747 IRX5P78411 483 aaPredicted RBP13.98□□□□□ -0.17
CPNE4-201ENST00000429747 MECOMQ03112 1051 aa13.98□□□□□ -0.17
CPNE4-201ENST00000429747 ERFEQ4G0M1 354 aa13.98□□□□□ -0.17
CPNE4-201ENST00000429747 VWA3BQ502W6 1294 aa13.98□□□□□ -0.17
CPNE4-201ENST00000429747 LRRC47Q8N1G4 583 aaKnown RBP13.98□□□□□ -0.17
CPNE4-201ENST00000429747 RETREG2Q8NC44 543 aa13.98□□□□□ -0.17
CPNE4-201ENST00000429747 CCDC26Q8TAB7 109 aa13.98□□□□□ -0.17
CPNE4-201ENST00000429747 SCLT1Q96NL6 688 aa13.98□□□□□ -0.17
CPNE4-201ENST00000429747 TSKSQ9UJT2 592 aa13.98□□□□□ -0.17
CPNE4-201ENST00000429747 RPL13P26373 211 aaKnown RBP13.97□□□□□ -0.17
CPNE4-201ENST00000429747 CASP7P55210 303 aa13.97□□□□□ -0.17
CPNE4-201ENST00000429747 MAP3K14Q99558 947 aa13.97□□□□□ -0.17
CPNE4-201ENST00000429747 TMOD2Q9NZR1 351 aa13.97□□□□□ -0.17
CPNE4-201ENST00000429747 SALL1Q9NSC2 1324 aa13.97□□□□□ -0.17
CPNE4-201ENST00000429747 ARL6IP4Q66PJ3 421 aaKnown RBP13.97□□□□□ -0.17
CPNE4-201ENST00000429747 PEX26Q7Z412 305 aa13.97□□□□□ -0.17
CPNE4-201ENST00000429747 POTEDQ86YR6 584 aa13.97□□□□□ -0.17
CPNE4-201ENST00000429747 TBCKQ8TEA7 893 aa13.97□□□□□ -0.17
CPNE4-201ENST00000429747 THAP9Q9H5L6 903 aa13.97□□□□□ -0.17
CPNE4-201ENST00000429747 KNDC1Q76NI1 1749 aa13.97□□□□□ -0.17
CPNE4-201ENST00000429747 FAM26FQ5R3K3 315 aa13.97□□□□□ -0.17
CPNE4-201ENST00000429747 DAAM2Q86T65 1068 aa13.97□□□□□ -0.17
CPNE4-201ENST00000429747 LRRC45Q96CN5 670 aa13.97□□□□□ -0.17
CPNE4-201ENST00000429747 KRT12Q99456 494 aa13.97□□□□□ -0.17
CPNE4-201ENST00000429747 JRKLQ9Y4A0 524 aa13.97□□□□□ -0.17
CPNE4-201ENST00000429747 CAPN7Q9Y6W3 813 aa13.97□□□□□ -0.17
CPNE4-201ENST00000429747 ANKRD26Q9UPS8 1709 aa13.97□□□□□ -0.17
CPNE4-201ENST00000429747 GOLGA8KD6RF30 607 aa13.97□□□□□ -0.17
CPNE4-201ENST00000429747 GYPCP04921 128 aa13.97□□□□□ -0.17
CPNE4-201ENST00000429747 ATP1A1P05023 1023 aaKnown RBP13.97□□□□□ -0.17
CPNE4-201ENST00000429747 EPB41P11171 864 aaKnown RBP13.97□□□□□ -0.17
CPNE4-201ENST00000429747 PRDX5P30044 214 aa13.97□□□□□ -0.17
CPNE4-201ENST00000429747 TNIP1Q15025 636 aa13.97□□□□□ -0.17
CPNE4-201ENST00000429747 USP17L2Q6R6M4 530 aa13.97□□□□□ -0.17
CPNE4-201ENST00000429747 CCDC170Q8IYT3 715 aa13.97□□□□□ -0.17
CPNE4-201ENST00000429747 IQCDQ96DY2 449 aa13.97□□□□□ -0.17
CPNE4-201ENST00000429747 EPB41L5Q9HCM4 733 aa13.97□□□□□ -0.17
CPNE4-201ENST00000429747 FTCDO95954 541 aa13.96□□□□□ -0.17
CPNE4-201ENST00000429747 TOB1P50616 345 aaPredicted RBP13.96□□□□□ -0.17
CPNE4-201ENST00000429747 DIXDC1Q155Q3 683 aa13.96□□□□□ -0.17
CPNE4-201ENST00000429747 KRT71Q3SY84 523 aa13.96□□□□□ -0.17
CPNE4-201ENST00000429747 GALNT17Q6IS24 598 aa13.96□□□□□ -0.17
CPNE4-201ENST00000429747 LARP4BQ92615 738 aaKnown RBP13.96□□□□□ -0.17
CPNE4-201ENST00000429747 ZC3H12CQ9C0D7 883 aaKnown RBP13.96□□□□□ -0.17
CPNE4-201ENST00000429747 RASAL2Q9UJF2 1139 aa13.96□□□□□ -0.17
CPNE4-201ENST00000429747 PCDHA12Q9UN75 941 aa13.96□□□□□ -0.17
CPNE4-201ENST00000429747 PCDHB13Q9Y5F0 798 aa13.96□□□□□ -0.17
CPNE4-201ENST00000429747 CHMP2AO43633 222 aa13.96□□□□□ -0.17
CPNE4-201ENST00000429747 KIF11P52732 1056 aa13.96□□□□□ -0.17
CPNE4-201ENST00000429747 ATP2C1P98194 919 aaPredicted RBP13.96□□□□□ -0.17
CPNE4-201ENST00000429747 CACNB1Q02641 598 aaPredicted RBP13.96□□□□□ -0.17
CPNE4-201ENST00000429747 RASGRP2Q7LDG7 609 aa13.96□□□□□ -0.17
CPNE4-201ENST00000429747 GPBP1Q86WP2 473 aa13.96□□□□□ -0.17
CPNE4-201ENST00000429747 CNBD1Q8NA66 436 aa13.96□□□□□ -0.17
CPNE4-201ENST00000429747 NOA1Q8NC60 698 aaKnown RBP13.96□□□□□ -0.17
CPNE4-201ENST00000429747 CABS1Q96KC9 395 aa13.96□□□□□ -0.17
CPNE4-201ENST00000429747 HEXIM1O94992 359 aaKnown RBP13.96□□□□□ -0.18
CPNE4-201ENST00000429747 IRX3P78415 501 aaPredicted RBP13.96□□□□□ -0.18
CPNE4-201ENST00000429747 TMEM132AQ24JP5 1023 aa13.96□□□□□ -0.18
CPNE4-201ENST00000429747 TRIM65Q6PJ69 517 aa13.96□□□□□ -0.18
CPNE4-201ENST00000429747 NDST4Q9H3R1 872 aa13.96□□□□□ -0.18
CPNE4-201ENST00000429747 CYP19A1P11511 503 aaPredicted RBP13.95□□□□□ -0.18
CPNE4-201ENST00000429747 DPYDQ12882 1025 aa13.95□□□□□ -0.18
CPNE4-201ENST00000429747 PFKFB3Q16875 520 aaPredicted RBP13.95□□□□□ -0.18
CPNE4-201ENST00000429747 MSL1Q68DK7 614 aa13.95□□□□□ -0.18
CPNE4-201ENST00000429747 KRT26Q7Z3Y9 468 aa13.95□□□□□ -0.18
CPNE4-201ENST00000429747 SRBD1Q8N5C6 995 aaKnown RBP13.95□□□□□ -0.18
CPNE4-201ENST00000429747 NUCKS1Q9H1E3 243 aaKnown RBP13.95□□□□□ -0.18
CPNE4-201ENST00000429747 CUEDC2Q9H467 287 aa13.95□□□□□ -0.18
CPNE4-201ENST00000429747 TFR2Q9UP52 801 aa13.95□□□□□ -0.18
CPNE4-201ENST00000429747 PCDHA13Q9Y5I0 950 aa13.95□□□□□ -0.18
CPNE4-201ENST00000429747 ZNF804BA4D1E1 1349 aa13.95□□□□□ -0.18
CPNE4-201ENST00000429747 A6NNZ2 444 aa13.95□□□□□ -0.18
CPNE4-201ENST00000429747 FLOT1O75955 427 aa13.95□□□□□ -0.18
CPNE4-201ENST00000429747 MAN2A1Q16706 1144 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms