RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	AGBL1	Q96MI9	1066 aa		20.91	■□□□□ 0.94
MRPL28-203	ENST00000429738	ACAD9	Q9H845	621 aa		20.91	■□□□□ 0.94
MRPL28-203	ENST00000429738	DIAPH3	Q9NSV4	1193 aa		20.91	■□□□□ 0.94
MRPL28-203	ENST00000429738	FAM184B	Q9ULE4	1060 aa		20.91	■□□□□ 0.94
MRPL28-203	ENST00000429738	ISY1	Q9ULR0	285 aa	Known RBP	20.91	■□□□□ 0.94
MRPL28-203	ENST00000429738	MOXD2P	A6NHM9	499 aa		20.9	■□□□□ 0.94
MRPL28-203	ENST00000429738	TIMP1	P01033	207 aa		20.9	■□□□□ 0.94
MRPL28-203	ENST00000429738	PDE4A	P27815	886 aa		20.9	■□□□□ 0.94
MRPL28-203	ENST00000429738	IK	Q13123	557 aa	Predicted RBP	20.9	■□□□□ 0.94
MRPL28-203	ENST00000429738	KCNA10	Q16322	511 aa		20.9	■□□□□ 0.94
MRPL28-203	ENST00000429738	TKFC	Q3LXA3	575 aa		20.9	■□□□□ 0.94
MRPL28-203	ENST00000429738	TTC14	Q96N46	770 aa		20.9	■□□□□ 0.94
MRPL28-203	ENST00000429738	NEDD4	P46934	1319 aa		20.89	■□□□□ 0.93
MRPL28-203	ENST00000429738	SYNRG	Q9UMZ2	1314 aa		20.89	■□□□□ 0.93
MRPL28-203	ENST00000429738	LCT	P09848	1927 aa		20.89	■□□□□ 0.93
MRPL28-203	ENST00000429738	DNAJB2	P25686	324 aa		20.89	■□□□□ 0.93
MRPL28-203	ENST00000429738	NT5C2	P49902	561 aa		20.89	■□□□□ 0.93
MRPL28-203	ENST00000429738	CCSAP	Q6IQ19	270 aa	Predicted RBP	20.89	■□□□□ 0.93
MRPL28-203	ENST00000429738	FAM133A	Q8N9E0	248 aa		20.89	■□□□□ 0.93
MRPL28-203	ENST00000429738	DSCC1	Q9BVC3	393 aa		20.89	■□□□□ 0.93
MRPL28-203	ENST00000429738	RNF41	Q9H4P4	317 aa	Predicted RBP	20.89	■□□□□ 0.93
MRPL28-203	ENST00000429738	A1CF	Q9NQ94	594 aa	Known RBP	20.89	■□□□□ 0.93
MRPL28-203	ENST00000429738	HOMER2	Q9NSB8	354 aa		20.89	■□□□□ 0.93
MRPL28-203	ENST00000429738	RNF146	Q9NTX7	359 aa		20.89	■□□□□ 0.93
MRPL28-203	ENST00000429738	DUSP11	O75319	330 aa	Known RBP	20.88	■□□□□ 0.93
MRPL28-203	ENST00000429738	TTBK2	Q6IQ55	1244 aa		20.88	■□□□□ 0.93
MRPL28-203	ENST00000429738	TRERF1	Q96PN7	1200 aa		20.88	■□□□□ 0.93
MRPL28-203	ENST00000429738	RANBP17	Q9H2T7	1088 aa	Known RBP	20.88	■□□□□ 0.93
MRPL28-203	ENST00000429738	ZNF576	Q9H609	170 aa		20.88	■□□□□ 0.93
MRPL28-203	ENST00000429738	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	20.88	■□□□□ 0.93
MRPL28-203	ENST00000429738	TBX21	Q9UL17	535 aa		20.88	■□□□□ 0.93
MRPL28-203	ENST00000429738	MTMR7	Q9Y216	660 aa		20.88	■□□□□ 0.93
MRPL28-203	ENST00000429738	ELP1	O95163	1332 aa		20.87	■□□□□ 0.93
MRPL28-203	ENST00000429738	ZNF213	O14771	459 aa		20.87	■□□□□ 0.93
MRPL28-203	ENST00000429738	SNHG28	P0DPA3	235 aa		20.87	■□□□□ 0.93
MRPL28-203	ENST00000429738	PDHB	P11177	359 aa		20.87	■□□□□ 0.93
MRPL28-203	ENST00000429738	GSPT1	P15170	499 aa	Known RBP	20.87	■□□□□ 0.93
MRPL28-203	ENST00000429738	SNAP25	P60880	206 aa		20.87	■□□□□ 0.93
MRPL28-203	ENST00000429738	CNTN2	Q02246	1040 aa		20.87	■□□□□ 0.93
MRPL28-203	ENST00000429738	ACVR2B	Q13705	512 aa		20.87	■□□□□ 0.93
MRPL28-203	ENST00000429738	CCDC96	Q2M329	555 aa		20.87	■□□□□ 0.93
MRPL28-203	ENST00000429738	MFSD5	Q6N075	450 aa		20.87	■□□□□ 0.93
MRPL28-203	ENST00000429738	ARMCX2	Q7L311	632 aa		20.87	■□□□□ 0.93
MRPL28-203	ENST00000429738	ESR2	Q92731	530 aa		20.87	■□□□□ 0.93
MRPL28-203	ENST00000429738	KATNBL1	Q9H079	304 aa		20.87	■□□□□ 0.93
MRPL28-203	ENST00000429738	IL25	Q9H293	177 aa		20.87	■□□□□ 0.93
MRPL28-203	ENST00000429738	ABHD16B	Q9H3Z7	469 aa		20.87	■□□□□ 0.93
MRPL28-203	ENST00000429738	MROH7	Q68CQ1	1323 aa		20.86	■□□□□ 0.93
MRPL28-203	ENST00000429738	ICAM1	P05362	532 aa		20.86	■□□□□ 0.93
MRPL28-203	ENST00000429738	ALAS1	P13196	640 aa		20.86	■□□□□ 0.93
MRPL28-203	ENST00000429738	CST5	P28325	142 aa	Predicted RBP	20.86	■□□□□ 0.93
MRPL28-203	ENST00000429738	CDK7	P50613	346 aa		20.86	■□□□□ 0.93
MRPL28-203	ENST00000429738	TTC22	Q5TAA0	569 aa		20.86	■□□□□ 0.93
MRPL28-203	ENST00000429738	CCDC174	Q6PII3	467 aa		20.86	■□□□□ 0.93
MRPL28-203	ENST00000429738	CCDC144CP	Q8IYA2	1237 aa		20.86	■□□□□ 0.93
MRPL28-203	ENST00000429738	PCSK9	Q8NBP7	692 aa	Known RBP	20.86	■□□□□ 0.93
MRPL28-203	ENST00000429738	TIFA	Q96CG3	184 aa		20.86	■□□□□ 0.93
MRPL28-203	ENST00000429738	GLT1D1	Q96MS3	346 aa		20.86	■□□□□ 0.93
MRPL28-203	ENST00000429738	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	20.86	■□□□□ 0.93	1e-8	■■■■■ 29.6
MRPL28-203	ENST00000429738	ZHX1	Q9UKY1	873 aa	Predicted RBP	20.86	■□□□□ 0.93
MRPL28-203	ENST00000429738	LRRC37A2	A6NM11	1700 aa		20.86	■□□□□ 0.93
MRPL28-203	ENST00000429738	MYADML2	A6NDP7	307 aa		20.85	■□□□□ 0.93
MRPL28-203	ENST00000429738	ADCY6	O43306	1168 aa		20.85	■□□□□ 0.93
MRPL28-203	ENST00000429738	SLC16A2	P36021	539 aa		20.85	■□□□□ 0.93
MRPL28-203	ENST00000429738	PPIG	Q13427	754 aa	Known RBP eCLIP	20.85	■□□□□ 0.93	2e-6	■■■□□ 15.7
MRPL28-203	ENST00000429738	MUM1L1	Q5H9M0	696 aa		20.85	■□□□□ 0.93
MRPL28-203	ENST00000429738	TJAP1	Q5JTD0	557 aa		20.85	■□□□□ 0.93
MRPL28-203	ENST00000429738	SYDE2	Q5VT97	1194 aa		20.85	■□□□□ 0.93
MRPL28-203	ENST00000429738	C16orf59	Q7L2K0	433 aa		20.85	■□□□□ 0.93
MRPL28-203	ENST00000429738	DGKH	Q86XP1	1220 aa		20.85	■□□□□ 0.93
MRPL28-203	ENST00000429738	USP38	Q8NB14	1042 aa		20.85	■□□□□ 0.93
MRPL28-203	ENST00000429738	ASTN1	O14525	1302 aa		20.84	■□□□□ 0.93
MRPL28-203	ENST00000429738	FRMPD2	Q68DX3	1309 aa	Predicted RBP	20.84	■□□□□ 0.93
MRPL28-203	ENST00000429738	NCOR1	O75376	2440 aa		20.84	■□□□□ 0.93
MRPL28-203	ENST00000429738	SOWAHB	A6NEL2	793 aa		20.84	■□□□□ 0.93
MRPL28-203	ENST00000429738	IRX6	P78412	446 aa	Predicted RBP	20.84	■□□□□ 0.93
MRPL28-203	ENST00000429738	ZNF543	Q08ER8	600 aa		20.84	■□□□□ 0.93
MRPL28-203	ENST00000429738	TMEM240	Q5SV17	173 aa		20.84	■□□□□ 0.93
MRPL28-203	ENST00000429738	VTI1A	Q96AJ9	217 aa		20.84	■□□□□ 0.93
MRPL28-203	ENST00000429738	SPC25	Q9HBM1	224 aa		20.84	■□□□□ 0.93
MRPL28-203	ENST00000429738	CYP39A1	Q9NYL5	469 aa		20.84	■□□□□ 0.93
MRPL28-203	ENST00000429738	CCPG1	Q9ULG6	757 aa		20.84	■□□□□ 0.93
MRPL28-203	ENST00000429738	ARVCF	O00192	962 aa		20.83	■□□□□ 0.93
MRPL28-203	ENST00000429738	ASGR1	P07306	291 aa		20.83	■□□□□ 0.93
MRPL28-203	ENST00000429738	C6orf222	P0C671	652 aa	Predicted RBP	20.83	■□□□□ 0.93
MRPL28-203	ENST00000429738	CCDC144B	Q3MJ40	725 aa		20.83	■□□□□ 0.93
MRPL28-203	ENST00000429738	RASIP1	Q5U651	963 aa		20.83	■□□□□ 0.93
MRPL28-203	ENST00000429738	ANKS1A	Q92625	1134 aa		20.83	■□□□□ 0.93
MRPL28-203	ENST00000429738	ZKSCAN3	Q9BRR0	538 aa		20.83	■□□□□ 0.93
MRPL28-203	ENST00000429738	GPCPD1	Q9NPB8	672 aa		20.83	■□□□□ 0.93
MRPL28-203	ENST00000429738	KDM4A	O75164	1064 aa		20.82	■□□□□ 0.92
MRPL28-203	ENST00000429738	GJA9	P57773	515 aa		20.82	■□□□□ 0.92
MRPL28-203	ENST00000429738	NKX3-2	P78367	333 aa		20.82	■□□□□ 0.92
MRPL28-203	ENST00000429738	IRX5	P78411	483 aa	Predicted RBP	20.82	■□□□□ 0.92
MRPL28-203	ENST00000429738	IMMT	Q16891	758 aa	Known RBP	20.82	■□□□□ 0.92
MRPL28-203	ENST00000429738	GNAS	Q5JWF2	1037 aa		20.82	■□□□□ 0.92
MRPL28-203	ENST00000429738	TMEM199	Q8N511	208 aa		20.82	■□□□□ 0.92
MRPL28-203	ENST00000429738	UPF3A	Q9H1J1	476 aa	Known RBP	20.82	■□□□□ 0.92
MRPL28-203	ENST00000429738	CTNNA3	Q9UI47	895 aa		20.82	■□□□□ 0.92
MRPL28-203	ENST00000429738	RAD50	Q92878	1312 aa		20.81	■□□□□ 0.92

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