RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 ADSSL1Q8N142 457 aa15.4■□□□□ 0.06
THBS3-202ENST00000428962 LRRC47Q8N1G4 583 aaKnown RBP15.4■□□□□ 0.06
THBS3-202ENST00000428962 TBCKQ8TEA7 893 aa15.4■□□□□ 0.06
THBS3-202ENST00000428962 NOC3LQ8WTT2 800 aaKnown RBP15.4■□□□□ 0.06
THBS3-202ENST00000428962 SRRTQ9BXP5 876 aaKnown RBP15.4■□□□□ 0.06
THBS3-202ENST00000428962 EHD4Q9H223 541 aa15.4■□□□□ 0.06
THBS3-202ENST00000428962 DDX4Q9NQI0 724 aaKnown RBP15.4■□□□□ 0.06
THBS3-202ENST00000428962 DNAI1Q9UI46 699 aa15.4■□□□□ 0.06
THBS3-202ENST00000428962 PP2D1A8MPX8 630 aa15.4■□□□□ 0.06
THBS3-202ENST00000428962 KCNJ18B7U540 433 aa15.4■□□□□ 0.06
THBS3-202ENST00000428962 N4BP3O15049 544 aa15.4■□□□□ 0.06
THBS3-202ENST00000428962 MFAP3LO75121 409 aa15.4■□□□□ 0.06
THBS3-202ENST00000428962 PRCPP42785 496 aa15.4■□□□□ 0.06
THBS3-202ENST00000428962 KCNJ12Q14500 433 aa15.4■□□□□ 0.06
THBS3-202ENST00000428962 KMT5BQ4FZB7 885 aa15.4■□□□□ 0.06
THBS3-202ENST00000428962 TCP11X2Q5H9J9 407 aa15.4■□□□□ 0.06
THBS3-202ENST00000428962 GPATCH4Q5T3I0 446 aaKnown RBP15.4■□□□□ 0.06
THBS3-202ENST00000428962 UBA5Q9GZZ9 404 aa15.4■□□□□ 0.06
THBS3-202ENST00000428962 MTFR1LQ9H019 292 aa15.4■□□□□ 0.06
THBS3-202ENST00000428962 PPP1R1BQ9UD71 204 aaPredicted RBP15.4■□□□□ 0.06
THBS3-202ENST00000428962 GDAQ9Y2T3 454 aa15.4■□□□□ 0.06
THBS3-202ENST00000428962 CCDC175P0C221 793 aa15.39■□□□□ 0.05
THBS3-202ENST00000428962 PLCG1P19174 1290 aa15.39■□□□□ 0.05
THBS3-202ENST00000428962 COPB1P53618 953 aaKnown RBP15.39■□□□□ 0.05
THBS3-202ENST00000428962 FKBP1AP62942 108 aaKnown RBP15.39■□□□□ 0.05
THBS3-202ENST00000428962 RBL2Q08999 1139 aa15.39■□□□□ 0.05
THBS3-202ENST00000428962 ZNF543Q08ER8 600 aa15.39■□□□□ 0.05
THBS3-202ENST00000428962 TMEM266Q2M3C6 531 aa15.39■□□□□ 0.05
THBS3-202ENST00000428962 TRIM65Q6PJ69 517 aa15.39■□□□□ 0.05
THBS3-202ENST00000428962 PODNQ7Z5L7 613 aa15.39■□□□□ 0.05
THBS3-202ENST00000428962 COL23A1Q86Y22 540 aaPredicted RBP15.39■□□□□ 0.05
THBS3-202ENST00000428962 CALML4Q96GE6 196 aa15.39■□□□□ 0.05
THBS3-202ENST00000428962 CCDC17Q96LX7 622 aa15.39■□□□□ 0.05
THBS3-202ENST00000428962 RAB34Q9BZG1 259 aa15.39■□□□□ 0.05
THBS3-202ENST00000428962 GREB1LQ9C091 1923 aaPredicted RBP15.39■□□□□ 0.05
THBS3-202ENST00000428962 PNMA6FA0A0J9YX94 578 aa15.38■□□□□ 0.05
THBS3-202ENST00000428962 EEF1GP26641 437 aaKnown RBP15.38■□□□□ 0.05
THBS3-202ENST00000428962 CCT6AP40227 531 aaKnown RBP15.38■□□□□ 0.05
THBS3-202ENST00000428962 DOK7Q18PE1 504 aa15.38■□□□□ 0.05
THBS3-202ENST00000428962 CCDC93Q567U6 631 aa15.38■□□□□ 0.05
THBS3-202ENST00000428962 JAKMIP3Q5VZ66 844 aa15.38■□□□□ 0.05
THBS3-202ENST00000428962 CDC42EP5Q6NZY7 148 aa15.38■□□□□ 0.05
THBS3-202ENST00000428962 GIMAP8Q8ND71 665 aaPredicted RBP15.38■□□□□ 0.05
THBS3-202ENST00000428962 THAP9Q9H5L6 903 aa15.38■□□□□ 0.05
THBS3-202ENST00000428962 EXOC1Q9NV70 894 aa15.38■□□□□ 0.05
THBS3-202ENST00000428962 BIN2Q9UBW5 565 aaPredicted RBP15.38■□□□□ 0.05
THBS3-202ENST00000428962 ATF5Q9Y2D1 282 aaPredicted RBP15.38■□□□□ 0.05
THBS3-202ENST00000428962 BICDL2A1A5D9 508 aa15.38■□□□□ 0.05
THBS3-202ENST00000428962 KLRC4O43908 158 aa15.38■□□□□ 0.05
THBS3-202ENST00000428962 MMP10P09238 476 aa15.38■□□□□ 0.05
THBS3-202ENST00000428962 SHMT1P34896 483 aa15.38■□□□□ 0.05
THBS3-202ENST00000428962 SCNN1DP51172 638 aa15.38■□□□□ 0.05
THBS3-202ENST00000428962 CALCRLQ16602 461 aa15.38■□□□□ 0.05
THBS3-202ENST00000428962 TOGARAM2Q6ZUX3 1019 aa15.38■□□□□ 0.05
THBS3-202ENST00000428962 SLC16A10Q8TF71 515 aa15.38■□□□□ 0.05
THBS3-202ENST00000428962 DHTKD1Q96HY7 919 aaPredicted RBP15.38■□□□□ 0.05
THBS3-202ENST00000428962 C7orf25Q9BPX7 421 aa15.38■□□□□ 0.05
THBS3-202ENST00000428962 MAGEC2Q9UBF1 373 aaPredicted RBP15.38■□□□□ 0.05
THBS3-202ENST00000428962 STK17AQ9UEE5 414 aa15.38■□□□□ 0.05
THBS3-202ENST00000428962 HOXA7P31268 230 aaPredicted RBP15.37■□□□□ 0.05
THBS3-202ENST00000428962 CASQ1P31415 396 aa15.37■□□□□ 0.05
THBS3-202ENST00000428962 CRKP46108 304 aa15.37■□□□□ 0.05
THBS3-202ENST00000428962 FXR2P51116 673 aaKnown RBP eCLIP15.37■□□□□ 0.05
THBS3-202ENST00000428962 EIF6P56537 245 aaKnown RBP15.37■□□□□ 0.05
THBS3-202ENST00000428962 ZNF397Q8NF99 534 aaPredicted RBP15.37■□□□□ 0.05
THBS3-202ENST00000428962 TRIM47Q96LD4 638 aa15.37■□□□□ 0.05
THBS3-202ENST00000428962 ZDHHC15Q96MV8 337 aa15.37■□□□□ 0.05
THBS3-202ENST00000428962 MRIQ9BWK5 157 aa15.37■□□□□ 0.05
THBS3-202ENST00000428962 GLT8D2Q9H1C3 349 aa15.37■□□□□ 0.05
THBS3-202ENST00000428962 DHX36Q9H2U1 1008 aaKnown RBP15.37■□□□□ 0.05
THBS3-202ENST00000428962 GPCPD1Q9NPB8 672 aa15.37■□□□□ 0.05
THBS3-202ENST00000428962 RIC8AQ9NPQ8 531 aa15.37■□□□□ 0.05
THBS3-202ENST00000428962 TAB2Q9NYJ8 693 aa15.37■□□□□ 0.05
THBS3-202ENST00000428962 ADAMTSL1Q8N6G6 1762 aa15.37■□□□□ 0.05
THBS3-202ENST00000428962 MPHOSPH10O00566 681 aaKnown RBP15.36■□□□□ 0.05
THBS3-202ENST00000428962 GYPCP04921 128 aa15.36■□□□□ 0.05
THBS3-202ENST00000428962 FECHP22830 423 aa15.36■□□□□ 0.05
THBS3-202ENST00000428962 TECP42680 631 aa15.36■□□□□ 0.05
THBS3-202ENST00000428962 CCDC96Q2M329 555 aa15.36■□□□□ 0.05
THBS3-202ENST00000428962 APOBEC3HQ6NTF7 200 aaKnown RBP15.36■□□□□ 0.05
THBS3-202ENST00000428962 POTEDQ86YR6 584 aa15.36■□□□□ 0.05
THBS3-202ENST00000428962 PLIN2Q99541 437 aa15.36■□□□□ 0.05
THBS3-202ENST00000428962 FEZ1Q99689 392 aa15.36■□□□□ 0.05
THBS3-202ENST00000428962 NAP1L4Q99733 375 aaKnown RBP15.36■□□□□ 0.05
THBS3-202ENST00000428962 TRIM9Q9C026 710 aa15.36■□□□□ 0.05
THBS3-202ENST00000428962 CASP14P31944 242 aa15.36■□□□□ 0.05
THBS3-202ENST00000428962 PTGER2P43116 358 aa15.36■□□□□ 0.05
THBS3-202ENST00000428962 ASIC1P78348 528 aa15.36■□□□□ 0.05
THBS3-202ENST00000428962 HDLBPQ00341 1268 aaKnown RBP15.36■□□□□ 0.05
THBS3-202ENST00000428962 CNNM4Q6P4Q7 775 aa15.36■□□□□ 0.05
THBS3-202ENST00000428962 TMTC1Q8IUR5 882 aa15.36■□□□□ 0.05
THBS3-202ENST00000428962 FAM114A1Q8IWE2 563 aa15.36■□□□□ 0.05
THBS3-202ENST00000428962 ADGRF4Q8IZF3 695 aa15.36■□□□□ 0.05
THBS3-202ENST00000428962 CUL5Q93034 780 aa15.36■□□□□ 0.05
THBS3-202ENST00000428962 COA7Q96BR5 231 aa15.36■□□□□ 0.05
THBS3-202ENST00000428962 MTMR9Q96QG7 549 aa15.36■□□□□ 0.05
THBS3-202ENST00000428962 VPS16Q9H269 839 aa15.36■□□□□ 0.05
THBS3-202ENST00000428962 JMJD4Q9H9V9 463 aa15.36■□□□□ 0.05
THBS3-202ENST00000428962 TMEM260Q9NX78 707 aa15.36■□□□□ 0.05
THBS3-202ENST00000428962 MAPK8IP1Q9UQF2 711 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms