RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 USP17L6PQ6QN14 398 aa10.18□□□□□ -0.78
SMC6-204ENST00000428868 GADL1Q6ZQY3 521 aa10.18□□□□□ -0.78
SMC6-204ENST00000428868 ARMC9Q7Z3E5 817 aa10.18□□□□□ -0.78
SMC6-204ENST00000428868 ERO1BQ86YB8 467 aa10.18□□□□□ -0.78
SMC6-204ENST00000428868 ZNF713Q8N859 430 aaPredicted RBP10.18□□□□□ -0.78
SMC6-204ENST00000428868 LINC00301Q8NCQ3 95 aa10.18□□□□□ -0.78
SMC6-204ENST00000428868 REPS2Q8NFH8 660 aa10.18□□□□□ -0.78
SMC6-204ENST00000428868 CHURC1Q8WUH1 139 aa10.18□□□□□ -0.78
SMC6-204ENST00000428868 TBC1D5Q92609 795 aa10.18□□□□□ -0.78
SMC6-204ENST00000428868 AGBL1Q96MI9 1066 aa10.18□□□□□ -0.78
SMC6-204ENST00000428868 AMNQ9BXJ7 453 aa10.18□□□□□ -0.78
SMC6-204ENST00000428868 GBA2Q9HCG7 927 aaPredicted RBP10.18□□□□□ -0.78
SMC6-204ENST00000428868 BRMS1Q9HCU9 246 aa10.18□□□□□ -0.78
SMC6-204ENST00000428868 POLR3EQ9NVU0 708 aa10.18□□□□□ -0.78
SMC6-204ENST00000428868 RCOR1Q9UKL0 485 aa10.18□□□□□ -0.78
SMC6-204ENST00000428868 PPP1R9AQ9ULJ8 1098 aa10.18□□□□□ -0.78
SMC6-204ENST00000428868 ELP1O95163 1332 aa10.17□□□□□ -0.78
SMC6-204ENST00000428868 A0A0G2JLL6 359 aaPredicted RBP10.17□□□□□ -0.78
SMC6-204ENST00000428868 C19orf81C9J6K1 198 aa10.17□□□□□ -0.78
SMC6-204ENST00000428868 GOLGA6L22H0YM25 854 aa10.17□□□□□ -0.78
SMC6-204ENST00000428868 MARCKSP29966 332 aaPredicted RBP10.17□□□□□ -0.78
SMC6-204ENST00000428868 GRIN1Q05586 938 aa10.17□□□□□ -0.78
SMC6-204ENST00000428868 FSTL1Q12841 308 aa10.17□□□□□ -0.78
SMC6-204ENST00000428868 STK38Q15208 465 aa10.17□□□□□ -0.78
SMC6-204ENST00000428868 INF2Q27J81 1249 aa10.17□□□□□ -0.78
SMC6-204ENST00000428868 CATSPERGQ6ZRH7 1159 aa10.17□□□□□ -0.78
SMC6-204ENST00000428868 PRRT2Q7Z6L0 340 aaPredicted RBP10.17□□□□□ -0.78
SMC6-204ENST00000428868 CCDC12Q8WUD4 166 aaPredicted RBP10.17□□□□□ -0.78
SMC6-204ENST00000428868 RAVER2Q9HCJ3 691 aaKnown RBP10.17□□□□□ -0.78
SMC6-204ENST00000428868 C6orf50Q9HD87 102 aa10.17□□□□□ -0.78
SMC6-204ENST00000428868 RIC8AQ9NPQ8 531 aa10.17□□□□□ -0.78
SMC6-204ENST00000428868 KCNH4Q9UQ05 1017 aa10.17□□□□□ -0.78
SMC6-204ENST00000428868 SPDYE16A6NNV3 312 aaPredicted RBP10.16□□□□□ -0.78
SMC6-204ENST00000428868 MEIS2O14770 477 aa10.16□□□□□ -0.78
SMC6-204ENST00000428868 LIG1P18858 919 aa10.16□□□□□ -0.78
SMC6-204ENST00000428868 HOXA13P31271 388 aaPredicted RBP10.16□□□□□ -0.78
SMC6-204ENST00000428868 DSG3P32926 999 aa10.16□□□□□ -0.78
SMC6-204ENST00000428868 ZNF174Q15697 407 aa10.16□□□□□ -0.78
SMC6-204ENST00000428868 MUM1L1Q5H9M0 696 aa10.16□□□□□ -0.78
SMC6-204ENST00000428868 TTC38Q5R3I4 469 aa10.16□□□□□ -0.78
SMC6-204ENST00000428868 GPAT2Q6NUI2 795 aa10.16□□□□□ -0.78
SMC6-204ENST00000428868 CPXCR1Q8N123 301 aa10.16□□□□□ -0.78
SMC6-204ENST00000428868 REXO1Q8N1G1 1221 aaKnown RBP10.16□□□□□ -0.78
SMC6-204ENST00000428868 PRPF38AQ8NAV1 312 aaKnown RBP10.16□□□□□ -0.78
SMC6-204ENST00000428868 CUL5Q93034 780 aa10.16□□□□□ -0.78
SMC6-204ENST00000428868 SCAND2PQ9GZW5 306 aaPredicted RBP10.16□□□□□ -0.78
SMC6-204ENST00000428868 GOLPH3LQ9H4A5 285 aa10.16□□□□□ -0.78
SMC6-204ENST00000428868 SLC38A10Q9HBR0 1119 aa10.16□□□□□ -0.78
SMC6-204ENST00000428868 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.16□□□□□ -0.78
SMC6-204ENST00000428868 TMOD4Q9NZQ9 345 aa10.16□□□□□ -0.78
SMC6-204ENST00000428868 CFAP45Q9UL16 551 aa10.16□□□□□ -0.78
SMC6-204ENST00000428868 PCDHA7Q9UN72 937 aa10.16□□□□□ -0.78
SMC6-204ENST00000428868 CCDC194A0A1B0GVG4 234 aa10.15□□□□□ -0.78
SMC6-204ENST00000428868 VWA5AO00534 786 aa10.15□□□□□ -0.78
SMC6-204ENST00000428868 NFIBO00712 420 aa10.15□□□□□ -0.78
SMC6-204ENST00000428868 CXCL11O14625 94 aa10.15□□□□□ -0.78
SMC6-204ENST00000428868 SPTLC2O15270 562 aa10.15□□□□□ -0.78
SMC6-204ENST00000428868 YEATS4O95619 227 aa10.15□□□□□ -0.78
SMC6-204ENST00000428868 ICAM1P05362 532 aa10.15□□□□□ -0.78
SMC6-204ENST00000428868 GNA11P29992 359 aa10.15□□□□□ -0.78
SMC6-204ENST00000428868 SLC39A14Q15043 492 aa10.15□□□□□ -0.78
SMC6-204ENST00000428868 RILPL1Q5EBL4 403 aa10.15□□□□□ -0.78
SMC6-204ENST00000428868 AXDND1Q5T1B0 1012 aaPredicted RBP10.15□□□□□ -0.78
SMC6-204ENST00000428868 ATL3Q6DD88 541 aa10.15□□□□□ -0.78
SMC6-204ENST00000428868 GALNT17Q6IS24 598 aa10.15□□□□□ -0.78
SMC6-204ENST00000428868 KRT25Q7Z3Z0 450 aa10.15□□□□□ -0.78
SMC6-204ENST00000428868 FAM177A1Q8N128 213 aaPredicted RBP10.15□□□□□ -0.78
SMC6-204ENST00000428868 TBCKQ8TEA7 893 aa10.15□□□□□ -0.78
SMC6-204ENST00000428868 CLEC4DQ8WXI8 215 aa10.15□□□□□ -0.78
SMC6-204ENST00000428868 SLC10A4Q96EP9 437 aa10.15□□□□□ -0.78
SMC6-204ENST00000428868 CLIC6Q96NY7 704 aa10.15□□□□□ -0.78
SMC6-204ENST00000428868 TMEM60Q9H2L4 133 aa10.15□□□□□ -0.78
SMC6-204ENST00000428868 R3HDMLQ9H3Y0 253 aa10.15□□□□□ -0.78
SMC6-204ENST00000428868 PSTPIP2Q9H939 334 aa10.15□□□□□ -0.78
SMC6-204ENST00000428868 TMEM63CQ9P1W3 806 aa10.15□□□□□ -0.78
SMC6-204ENST00000428868 CCPG1Q9ULG6 757 aa10.15□□□□□ -0.78
SMC6-204ENST00000428868 RIPK3Q9Y572 518 aa10.15□□□□□ -0.78
SMC6-204ENST00000428868 DDX49Q9Y6V7 483 aaKnown RBP10.15□□□□□ -0.78
SMC6-204ENST00000428868 PASKQ96RG2 1323 aa10.14□□□□□ -0.79
SMC6-204ENST00000428868 CNMDO75829 334 aa10.14□□□□□ -0.79
SMC6-204ENST00000428868 TDP2O95551 362 aa10.14□□□□□ -0.79
SMC6-204ENST00000428868 ALAS1P13196 640 aa10.14□□□□□ -0.79
SMC6-204ENST00000428868 MCM7P33993 719 aa10.14□□□□□ -0.79
SMC6-204ENST00000428868 UBE2HP62256 183 aa10.14□□□□□ -0.79
SMC6-204ENST00000428868 TMEM132BQ14DG7 1078 aa10.14□□□□□ -0.79
SMC6-204ENST00000428868 NONOQ15233 471 aaKnown RBP eCLIP10.14□□□□□ -0.79
SMC6-204ENST00000428868 IL17AQ16552 155 aa10.14□□□□□ -0.79
SMC6-204ENST00000428868 KLHL40Q2TBA0 621 aa10.14□□□□□ -0.79
SMC6-204ENST00000428868 C4orf32Q8N8J7 132 aa10.14□□□□□ -0.79
SMC6-204ENST00000428868 C2orf69Q8N8R5 385 aa10.14□□□□□ -0.79
SMC6-204ENST00000428868 PROCA1Q8NCQ7 364 aaPredicted RBP10.14□□□□□ -0.79
SMC6-204ENST00000428868 ANO3Q9BYT9 981 aa10.14□□□□□ -0.79
SMC6-204ENST00000428868 GZF1Q9H116 711 aaPredicted RBP10.14□□□□□ -0.79
SMC6-204ENST00000428868 HOMER2Q9NSB8 354 aa10.14□□□□□ -0.79
SMC6-204ENST00000428868 COL20A1Q9P218 1284 aa10.14□□□□□ -0.79
SMC6-204ENST00000428868 FBXO2Q9UK22 296 aaPredicted RBP10.14□□□□□ -0.79
SMC6-204ENST00000428868 ZNF214Q9UL59 606 aaPredicted RBP10.14□□□□□ -0.79
SMC6-204ENST00000428868 NOL7Q9UMY1 257 aaKnown RBP10.14□□□□□ -0.79
SMC6-204ENST00000428868 ADAMTS5Q9UNA0 930 aa10.14□□□□□ -0.79
SMC6-204ENST00000428868 ABCB11O95342 1321 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms