RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 ZBED4O75132 1171 aa14.53□□□□□ -0.08
HMGB3P4-201ENST00000428776 BMP15O95972 392 aa14.53□□□□□ -0.08
HMGB3P4-201ENST00000428776 ICAM1P05362 532 aa14.53□□□□□ -0.08
HMGB3P4-201ENST00000428776 CLK2P49760 499 aaKnown RBP14.53□□□□□ -0.08
HMGB3P4-201ENST00000428776 COG2Q14746 738 aa14.53□□□□□ -0.08
HMGB3P4-201ENST00000428776 PTPAQ15257 358 aa14.53□□□□□ -0.08
HMGB3P4-201ENST00000428776 USH1GQ495M9 461 aa14.53□□□□□ -0.08
HMGB3P4-201ENST00000428776 NOM1Q5C9Z4 860 aaKnown RBP14.53□□□□□ -0.08
HMGB3P4-201ENST00000428776 CCDC174Q6PII3 467 aa14.53□□□□□ -0.08
HMGB3P4-201ENST00000428776 PRRT2Q7Z6L0 340 aaPredicted RBP14.53□□□□□ -0.08
HMGB3P4-201ENST00000428776 C2orf69Q8N8R5 385 aa14.53□□□□□ -0.08
HMGB3P4-201ENST00000428776 RASGRP4Q8TDF6 673 aa14.53□□□□□ -0.08
HMGB3P4-201ENST00000428776 CNKSR2Q8WXI2 1034 aa14.53□□□□□ -0.08
HMGB3P4-201ENST00000428776 ANP32EQ9BTT0 268 aa14.53□□□□□ -0.08
HMGB3P4-201ENST00000428776 SLC38A10Q9HBR0 1119 aa14.53□□□□□ -0.08
HMGB3P4-201ENST00000428776 GBA2Q9HCG7 927 aaPredicted RBP14.53□□□□□ -0.08
HMGB3P4-201ENST00000428776 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.53□□□□□ -0.08
HMGB3P4-201ENST00000428776 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.53□□□□□ -0.08
HMGB3P4-201ENST00000428776 BIN2Q9UBW5 565 aaPredicted RBP14.53□□□□□ -0.08
HMGB3P4-201ENST00000428776 PCDHB6Q9Y5E3 794 aa14.53□□□□□ -0.08
HMGB3P4-201ENST00000428776 MORC2Q9Y6X9 1032 aaPredicted RBP14.53□□□□□ -0.08
HMGB3P4-201ENST00000428776 PPP6R2O75170 966 aa14.52□□□□□ -0.09
HMGB3P4-201ENST00000428776 ITGBL1O95965 494 aaPredicted RBP14.52□□□□□ -0.09
HMGB3P4-201ENST00000428776 ME1P48163 572 aa14.52□□□□□ -0.09
HMGB3P4-201ENST00000428776 FMR1Q06787 632 aaKnown RBP eCLIP14.52□□□□□ -0.09
HMGB3P4-201ENST00000428776 TTC38Q5R3I4 469 aa14.52□□□□□ -0.09
HMGB3P4-201ENST00000428776 SAMD1Q6SPF0 538 aaPredicted RBP14.52□□□□□ -0.09
HMGB3P4-201ENST00000428776 GPT2Q8TD30 523 aa14.52□□□□□ -0.09
HMGB3P4-201ENST00000428776 OPTNQ96CV9 577 aa14.52□□□□□ -0.09
HMGB3P4-201ENST00000428776 PGBD1Q96JS3 809 aa14.52□□□□□ -0.09
HMGB3P4-201ENST00000428776 HOXC10Q9NYD6 342 aa14.52□□□□□ -0.09
HMGB3P4-201ENST00000428776 ADAMTS5Q9UNA0 930 aa14.52□□□□□ -0.09
HMGB3P4-201ENST00000428776 MRPL11Q9Y3B7 192 aaKnown RBP14.52□□□□□ -0.09
HMGB3P4-201ENST00000428776 CTDP1Q9Y5B0 961 aaPredicted RBP14.52□□□□□ -0.09
HMGB3P4-201ENST00000428776 ZNF536O15090 1300 aa14.51□□□□□ -0.09
HMGB3P4-201ENST00000428776 VWA5AO00534 786 aa14.51□□□□□ -0.09
HMGB3P4-201ENST00000428776 CELF2O95319 508 aaKnown RBP14.51□□□□□ -0.09
HMGB3P4-201ENST00000428776 FOSP01100 380 aaPredicted RBP14.51□□□□□ -0.09
HMGB3P4-201ENST00000428776 ATP2B1P20020 1258 aa14.51□□□□□ -0.09
HMGB3P4-201ENST00000428776 DSG3P32926 999 aa14.51□□□□□ -0.09
HMGB3P4-201ENST00000428776 JAKMIP3Q5VZ66 844 aa14.51□□□□□ -0.09
HMGB3P4-201ENST00000428776 ADALQ6DHV7 355 aa14.51□□□□□ -0.09
HMGB3P4-201ENST00000428776 FASTKD5Q7L8L6 764 aaKnown RBP14.51□□□□□ -0.09
HMGB3P4-201ENST00000428776 TMEM260Q9NX78 707 aa14.51□□□□□ -0.09
HMGB3P4-201ENST00000428776 PCDHA7Q9UN72 937 aa14.51□□□□□ -0.09
HMGB3P4-201ENST00000428776 A0A1W2PQ27 194 aa14.5□□□□□ -0.09
HMGB3P4-201ENST00000428776 A0A1W2PQ64 194 aa14.5□□□□□ -0.09
HMGB3P4-201ENST00000428776 A0A1W2PQD8 194 aa14.5□□□□□ -0.09
HMGB3P4-201ENST00000428776 PIK3CDO00329 1044 aa14.5□□□□□ -0.09
HMGB3P4-201ENST00000428776 MEIS2O14770 477 aa14.5□□□□□ -0.09
HMGB3P4-201ENST00000428776 HOXA7P31268 230 aaPredicted RBP14.5□□□□□ -0.09
HMGB3P4-201ENST00000428776 OAZ1P54368 228 aa14.5□□□□□ -0.09
HMGB3P4-201ENST00000428776 AP3B2Q13367 1082 aa14.5□□□□□ -0.09
HMGB3P4-201ENST00000428776 ORC2Q13416 577 aaPredicted RBP14.5□□□□□ -0.09
HMGB3P4-201ENST00000428776 UBE2SQ16763 222 aa14.5□□□□□ -0.09
HMGB3P4-201ENST00000428776 INF2Q27J81 1249 aa14.5□□□□□ -0.09
HMGB3P4-201ENST00000428776 GADL1Q6ZQY3 521 aa14.5□□□□□ -0.09
HMGB3P4-201ENST00000428776 NEK8Q86SG6 692 aa14.5□□□□□ -0.09
HMGB3P4-201ENST00000428776 ATG4CQ96DT6 458 aa14.5□□□□□ -0.09
HMGB3P4-201ENST00000428776 CCPG1Q9ULG6 757 aa14.5□□□□□ -0.09
HMGB3P4-201ENST00000428776 OPLAHO14841 1288 aa14.49□□□□□ -0.09
HMGB3P4-201ENST00000428776 CUTAO60888 179 aa14.49□□□□□ -0.09
HMGB3P4-201ENST00000428776 SNAPC2Q13487 334 aa14.49□□□□□ -0.09
HMGB3P4-201ENST00000428776 ZNF174Q15697 407 aa14.49□□□□□ -0.09
HMGB3P4-201ENST00000428776 TREML2Q5T2D2 321 aa14.49□□□□□ -0.09
HMGB3P4-201ENST00000428776 USP17L6PQ6QN14 398 aa14.49□□□□□ -0.09
HMGB3P4-201ENST00000428776 SAMD3Q8N6K7 520 aa14.49□□□□□ -0.09
HMGB3P4-201ENST00000428776 TBCKQ8TEA7 893 aa14.49□□□□□ -0.09
HMGB3P4-201ENST00000428776 AGBL1Q96MI9 1066 aa14.49□□□□□ -0.09
HMGB3P4-201ENST00000428776 GPBP1L1Q9HC44 474 aaPredicted RBP14.49□□□□□ -0.09
HMGB3P4-201ENST00000428776 AGTPBP1Q9UPW5 1226 aa14.49□□□□□ -0.09
HMGB3P4-201ENST00000428776 LAD1O00515 517 aa14.48□□□□□ -0.09
HMGB3P4-201ENST00000428776 ATP2A1O14983 1001 aa14.48□□□□□ -0.09
HMGB3P4-201ENST00000428776 PTPREP23469 700 aa14.48□□□□□ -0.09
HMGB3P4-201ENST00000428776 MARCKSP29966 332 aaPredicted RBP14.48□□□□□ -0.09
HMGB3P4-201ENST00000428776 MCM7P33993 719 aa14.48□□□□□ -0.09
HMGB3P4-201ENST00000428776 PABPC4Q13310 644 aaKnown RBP eCLIP14.48□□□□□ -0.09
HMGB3P4-201ENST00000428776 AXDND1Q5T1B0 1012 aaPredicted RBP14.48□□□□□ -0.09
HMGB3P4-201ENST00000428776 CST9Q5W186 159 aa14.48□□□□□ -0.09
HMGB3P4-201ENST00000428776 MCF2L2Q86YR7 1114 aa14.48□□□□□ -0.09
HMGB3P4-201ENST00000428776 CPXCR1Q8N123 301 aa14.48□□□□□ -0.09
HMGB3P4-201ENST00000428776 KRI1Q8N9T8 703 aaKnown RBP14.48□□□□□ -0.09
HMGB3P4-201ENST00000428776 REPS2Q8NFH8 660 aa14.48□□□□□ -0.09
HMGB3P4-201ENST00000428776 SYAP1Q96A49 352 aaPredicted RBP14.48□□□□□ -0.09
HMGB3P4-201ENST00000428776 FERMT2Q96AC1 680 aa14.48□□□□□ -0.09
HMGB3P4-201ENST00000428776 WNK4Q96J92 1243 aa14.48□□□□□ -0.09
HMGB3P4-201ENST00000428776 NAP1L4Q99733 375 aaKnown RBP14.48□□□□□ -0.09
HMGB3P4-201ENST00000428776 RAVER2Q9HCJ3 691 aaKnown RBP14.48□□□□□ -0.09
HMGB3P4-201ENST00000428776 MAP3K20Q9NYL2 800 aaKnown RBP14.48□□□□□ -0.09
HMGB3P4-201ENST00000428776 SRPRBQ9Y5M8 271 aaKnown RBP14.48□□□□□ -0.09
HMGB3P4-201ENST00000428776 SPDYE3A6NKU9 549 aa14.47□□□□□ -0.09
HMGB3P4-201ENST00000428776 SPDYE16A6NNV3 312 aaPredicted RBP14.47□□□□□ -0.09
HMGB3P4-201ENST00000428776 GCOM1H8Y6P7 765 aaPredicted RBP14.47□□□□□ -0.09
HMGB3P4-201ENST00000428776 WNT7AO00755 349 aa14.47□□□□□ -0.09
HMGB3P4-201ENST00000428776 CFBP00751 764 aa14.47□□□□□ -0.09
HMGB3P4-201ENST00000428776 POLR2MP0CAP2 368 aa14.47□□□□□ -0.09
HMGB3P4-201ENST00000428776 ALAS1P13196 640 aa14.47□□□□□ -0.09
HMGB3P4-201ENST00000428776 CMA1P23946 247 aa14.47□□□□□ -0.09
HMGB3P4-201ENST00000428776 GJA5P36382 358 aa14.47□□□□□ -0.09
HMGB3P4-201ENST00000428776 USP11P51784 963 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms