RNA–Protein interactions for RNA: ENST00000428413.5

SCAP-206, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 3,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-206ENST00000428413 MFAP3LO75121 409 aa16.79■□□□□ 0.28
SCAP-206ENST00000428413 PMS1P54277 932 aaKnown RBP16.79■□□□□ 0.28
SCAP-206ENST00000428413 AMPD3Q01432 767 aa16.79■□□□□ 0.28
SCAP-206ENST00000428413 RIN2Q8WYP3 895 aaPredicted RBP16.79■□□□□ 0.28
SCAP-206ENST00000428413 PHF20Q9BVI0 1012 aa16.79■□□□□ 0.28
SCAP-206ENST00000428413 EFCC1Q9HA90 598 aa16.79■□□□□ 0.28
SCAP-206ENST00000428413 ABCB6Q9NP58 842 aa16.79■□□□□ 0.28
SCAP-206ENST00000428413 ATP8A2Q9NTI2 1148 aa16.79■□□□□ 0.28
SCAP-206ENST00000428413 CWC15Q9P013 229 aaKnown RBP16.79■□□□□ 0.28
SCAP-206ENST00000428413 PCDHA4Q9UN74 947 aa16.79■□□□□ 0.28
SCAP-206ENST00000428413 PARP3Q9Y6F1 533 aa16.79■□□□□ 0.28
SCAP-206ENST00000428413 EFCAB8A8MWE9 144 aa16.79■□□□□ 0.28
SCAP-206ENST00000428413 ECM2O94769 699 aaPredicted RBP16.79■□□□□ 0.28
SCAP-206ENST00000428413 STK4Q13043 487 aa16.79■□□□□ 0.28
SCAP-206ENST00000428413 TMTC1Q8IUR5 882 aa16.79■□□□□ 0.28
SCAP-206ENST00000428413 RIC1Q4ADV7 1423 aa16.79■□□□□ 0.28
SCAP-206ENST00000428413 RNF225M0QZC1 329 aaPredicted RBP16.79■□□□□ 0.28
SCAP-206ENST00000428413 USO1O60763 962 aaKnown RBP16.79■□□□□ 0.28
SCAP-206ENST00000428413 TCP11X2Q5H9J9 407 aa16.79■□□□□ 0.28
SCAP-206ENST00000428413 TRIM31Q9BZY9 425 aa16.79■□□□□ 0.28
SCAP-206ENST00000428413 VEZTQ9HBM0 779 aa16.79■□□□□ 0.28
SCAP-206ENST00000428413 SAMM50Q9Y512 469 aa16.79■□□□□ 0.28
SCAP-206ENST00000428413 ZEB2O60315 1214 aa16.78■□□□□ 0.28
SCAP-206ENST00000428413 GYPCP04921 128 aa16.78■□□□□ 0.28
SCAP-206ENST00000428413 OR52Z1P0C646 297 aa16.78■□□□□ 0.28
SCAP-206ENST00000428413 KSR1Q8IVT5 923 aa16.78■□□□□ 0.28
SCAP-206ENST00000428413 SH2D3AQ9BRG2 576 aa16.78■□□□□ 0.28
SCAP-206ENST00000428413 N4BP1O75113 896 aaKnown RBP16.78■□□□□ 0.28
SCAP-206ENST00000428413 ATP2C2O75185 946 aa16.78■□□□□ 0.28
SCAP-206ENST00000428413 ERCC5P28715 1186 aaPredicted RBP16.78■□□□□ 0.28
SCAP-206ENST00000428413 SEC23AQ15436 765 aa16.78■□□□□ 0.28
SCAP-206ENST00000428413 EHD2Q9NZN4 543 aa16.78■□□□□ 0.28
SCAP-206ENST00000428413 XDHP47989 1333 aa16.78■□□□□ 0.28
SCAP-206ENST00000428413 GSTO1P78417 241 aa16.78■□□□□ 0.28
SCAP-206ENST00000428413 C2orf54Q08AI8 447 aa16.78■□□□□ 0.28
SCAP-206ENST00000428413 CEP112Q8N8E3 955 aa16.78■□□□□ 0.28
SCAP-206ENST00000428413 TSG101Q99816 390 aa16.78■□□□□ 0.28
SCAP-206ENST00000428413 DISC1Q9NRI5 854 aa16.78■□□□□ 0.28
SCAP-206ENST00000428413 MYO6Q9UM54 1294 aa16.78■□□□□ 0.28
SCAP-206ENST00000428413 FMN2Q9NZ56 1722 aa16.77■□□□□ 0.28
SCAP-206ENST00000428413 PLEKP08567 350 aaPredicted RBP16.77■□□□□ 0.28
SCAP-206ENST00000428413 PFKFB3Q16875 520 aaPredicted RBP16.77■□□□□ 0.28
SCAP-206ENST00000428413 NEK8Q86SG6 692 aa16.77■□□□□ 0.28
SCAP-206ENST00000428413 ZNF446Q9NWS9 450 aa16.77■□□□□ 0.28
SCAP-206ENST00000428413 SLC1A4P43007 532 aa16.77■□□□□ 0.27
SCAP-206ENST00000428413 RASSF7Q02833 373 aa16.77■□□□□ 0.27
SCAP-206ENST00000428413 KLHL7Q8IXQ5 586 aa16.77■□□□□ 0.27
SCAP-206ENST00000428413 NOA1Q8NC60 698 aaKnown RBP16.77■□□□□ 0.27
SCAP-206ENST00000428413 RAB34Q9BZG1 259 aa16.77■□□□□ 0.27
SCAP-206ENST00000428413 KIAA1024Q9UPX6 916 aa16.77■□□□□ 0.27
SCAP-206ENST00000428413 FAN1Q9Y2M0 1017 aa16.77■□□□□ 0.27
SCAP-206ENST00000428413 COL5A2P05997 1499 aaPredicted RBP16.77■□□□□ 0.27
SCAP-206ENST00000428413 MAGEA1P43355 309 aa16.77■□□□□ 0.27
SCAP-206ENST00000428413 NR1I3Q14994 352 aa16.77■□□□□ 0.27
SCAP-206ENST00000428413 PRR16Q569H4 304 aa16.77■□□□□ 0.27
SCAP-206ENST00000428413 HSD3B7Q9H2F3 369 aa16.77■□□□□ 0.27
SCAP-206ENST00000428413 PCDHB13Q9Y5F0 798 aa16.77■□□□□ 0.27
SCAP-206ENST00000428413 SMIM23A6NLE4 172 aa16.76■□□□□ 0.27
SCAP-206ENST00000428413 NCK2O43639 380 aa16.76■□□□□ 0.27
SCAP-206ENST00000428413 HOXA13P31271 388 aaPredicted RBP16.76■□□□□ 0.27
SCAP-206ENST00000428413 PAFAH1B1P43034 410 aa16.76■□□□□ 0.27
SCAP-206ENST00000428413 ODF2Q5BJF6 829 aa16.76■□□□□ 0.27
SCAP-206ENST00000428413 MYCBPQ99417 103 aaPredicted RBP16.76■□□□□ 0.27
SCAP-206ENST00000428413 ACBD3Q9H3P7 528 aa16.76■□□□□ 0.27
SCAP-206ENST00000428413 ABHD10Q9NUJ1 306 aa16.76■□□□□ 0.27
SCAP-206ENST00000428413 CDC23Q9UJX2 597 aa16.76■□□□□ 0.27
SCAP-206ENST00000428413 PACSIN2Q9UNF0 486 aaPredicted RBP16.76■□□□□ 0.27
SCAP-206ENST00000428413 NPHP3-ACAD11A0A0J9YXS1 232 aa16.76■□□□□ 0.27
SCAP-206ENST00000428413 DDAH1O94760 285 aa16.76■□□□□ 0.27
SCAP-206ENST00000428413 APBA1Q02410 837 aa16.76■□□□□ 0.27
SCAP-206ENST00000428413 PABPC4Q13310 644 aaKnown RBP eCLIP16.76■□□□□ 0.272e-7■■■□□ 18.8
SCAP-206ENST00000428413 KCTD16Q68DU8 428 aa16.76■□□□□ 0.27
SCAP-206ENST00000428413 IFIH1Q9BYX4 1025 aaKnown RBP16.76■□□□□ 0.27
SCAP-206ENST00000428413 MLXIPQ9HAP2 919 aa16.76■□□□□ 0.27
SCAP-206ENST00000428413 ADD3Q9UEY8 706 aaKnown RBP16.76■□□□□ 0.27
SCAP-206ENST00000428413 CTDP1Q9Y5B0 961 aaPredicted RBP16.76■□□□□ 0.27
SCAP-206ENST00000428413 PPP1R3GB7ZBB8 358 aa16.75■□□□□ 0.27
SCAP-206ENST00000428413 TADA3O75528 432 aa16.75■□□□□ 0.27
SCAP-206ENST00000428413 NDUFA10O95299 355 aa16.75■□□□□ 0.27
SCAP-206ENST00000428413 MOCS3O95396 460 aa16.75■□□□□ 0.27
SCAP-206ENST00000428413 CFBP00751 764 aa16.75■□□□□ 0.27
SCAP-206ENST00000428413 GUCY2FP51841 1108 aa16.75■□□□□ 0.27
SCAP-206ENST00000428413 TRIM65Q6PJ69 517 aa16.75■□□□□ 0.27
SCAP-206ENST00000428413 BPIFA3Q9BQP9 254 aa16.75■□□□□ 0.27
SCAP-206ENST00000428413 HOMER2Q9NSB8 354 aa16.75■□□□□ 0.27
SCAP-206ENST00000428413 SERPINB2P05120 415 aa16.75■□□□□ 0.27
SCAP-206ENST00000428413 STAT3P40763 770 aa16.75■□□□□ 0.27
SCAP-206ENST00000428413 ZNF658Q5TYW1 1059 aaPredicted RBP16.75■□□□□ 0.27
SCAP-206ENST00000428413 SND1Q7KZF4 910 aaKnown RBP eCLIP16.75■□□□□ 0.27
SCAP-206ENST00000428413 GPR161Q8N6U8 529 aaKnown RBP16.75■□□□□ 0.27
SCAP-206ENST00000428413 TRIML1Q8N9V2 468 aa16.75■□□□□ 0.27
SCAP-206ENST00000428413 MED15Q96RN5 788 aa16.75■□□□□ 0.27
SCAP-206ENST00000428413 SAR1BQ9Y6B6 198 aa16.75■□□□□ 0.27
SCAP-206ENST00000428413 TMEM110-MUSTN1A8MSY1 372 aa16.75■□□□□ 0.27
SCAP-206ENST00000428413 GPSM2P81274 684 aa16.75■□□□□ 0.27
SCAP-206ENST00000428413 NAA35Q5VZE5 725 aa16.75■□□□□ 0.27
SCAP-206ENST00000428413 SRGAP1Q7Z6B7 1085 aa16.75■□□□□ 0.27
SCAP-206ENST00000428413 BRIP1Q9BX63 1249 aa16.75■□□□□ 0.27
SCAP-206ENST00000428413 PNPLA7Q6ZV29 1317 aa16.74■□□□□ 0.27
SCAP-206ENST00000428413 CNTNAP5Q8WYK1 1306 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms