RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 PCDHA13Q9Y5I0 950 aa11.95□□□□□ -0.5
ATP2C1-204ENST00000428331 SLC7A5Q01650 507 aa11.95□□□□□ -0.5
ATP2C1-204ENST00000428331 CCDC40Q4G0X9 1142 aa11.95□□□□□ -0.5
ATP2C1-204ENST00000428331 LACRTQ9GZZ8 138 aa11.95□□□□□ -0.5
ATP2C1-204ENST00000428331 RNF14Q9UBS8 474 aa11.95□□□□□ -0.5
ATP2C1-204ENST00000428331 USP54Q70EL1 1684 aa11.95□□□□□ -0.5
ATP2C1-204ENST00000428331 SEC23AQ15436 765 aa11.95□□□□□ -0.5
ATP2C1-204ENST00000428331 TMEM266Q2M3C6 531 aa11.95□□□□□ -0.5
ATP2C1-204ENST00000428331 LRRC1Q9BTT6 524 aa11.95□□□□□ -0.5
ATP2C1-204ENST00000428331 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.95□□□□□ -0.5
ATP2C1-204ENST00000428331 TULP1O00294 542 aaPredicted RBP11.95□□□□□ -0.5
ATP2C1-204ENST00000428331 MOCS3O95396 460 aa11.95□□□□□ -0.5
ATP2C1-204ENST00000428331 LRRC27Q9C0I9 530 aa11.95□□□□□ -0.5
ATP2C1-204ENST00000428331 C1orf167Q5SNV9 1468 aa11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 LAD1O00515 517 aa11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 MAP2K2P36507 400 aa11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 KIF11P52732 1056 aa11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 PFKFB3Q16875 520 aaPredicted RBP11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 GLE1Q53GS7 698 aaKnown RBP11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 FAM47AQ5JRC9 791 aa11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 KCTD16Q68DU8 428 aa11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 SV2BQ7L1I2 683 aa11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 VGLL2Q8N8G2 317 aa11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 PCDHA4Q9UN74 947 aa11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 REXO2Q9Y3B8 237 aaKnown RBP11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 CXCR5P32302 372 aa11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 NNTQ13423 1086 aa11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 SLC9C1Q4G0N8 1177 aa11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 ZNF662Q6ZS27 426 aa11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 CCDC121Q6ZUS5 278 aa11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 ZNF444Q8N0Y2 327 aaPredicted RBP11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 OSBPL9Q96SU4 736 aa11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 NCAPGQ9BPX3 1015 aa11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 NID2Q14112 1375 aa11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 PRPF6O94906 941 aaKnown RBP11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 EIF4A3P38919 411 aaKnown RBP11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 INF2Q27J81 1249 aa11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 ANKRD13CQ8N6S4 541 aa11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 RIC1Q4ADV7 1423 aa11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 CYP2D7A0A087X1C5 515 aa11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 EXOC5O00471 708 aa11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 RHOBTB3O94955 611 aa11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 TROAPQ12815 778 aa11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 PDCLQ13371 301 aa11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 LETM2Q2VYF4 491 aa11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 GALNT17Q6IS24 598 aa11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 CABS1Q96KC9 395 aa11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 CCDC43Q96MW1 224 aaKnown RBP11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 BRIP1Q9BX63 1249 aa11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 BCCIPQ9P287 314 aaKnown RBP eCLIP11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 SEC63Q9UGP8 760 aaKnown RBP11.94□□□□□ -0.5
ATP2C1-204ENST00000428331 AK8Q96MA6 479 aa11.93□□□□□ -0.5
ATP2C1-204ENST00000428331 ANAPC4Q9UJX5 808 aa11.93□□□□□ -0.5
ATP2C1-204ENST00000428331 FGFR2P21802 821 aa11.93□□□□□ -0.5
ATP2C1-204ENST00000428331 ENOX2Q16206 610 aaKnown RBP11.93□□□□□ -0.5
ATP2C1-204ENST00000428331 MEA1Q16626 185 aa11.93□□□□□ -0.5
ATP2C1-204ENST00000428331 KRT26Q7Z3Y9 468 aa11.93□□□□□ -0.5
ATP2C1-204ENST00000428331 SRBD1Q8N5C6 995 aaKnown RBP11.93□□□□□ -0.5
ATP2C1-204ENST00000428331 GIMAP8Q8ND71 665 aaPredicted RBP11.93□□□□□ -0.5
ATP2C1-204ENST00000428331 GPKOWQ92917 476 aaPredicted RBP eCLIP11.93□□□□□ -0.55e-6■■□□□ 13.8
ATP2C1-204ENST00000428331 CEP89Q96ST8 783 aa11.93□□□□□ -0.5
ATP2C1-204ENST00000428331 CARD10Q9BWT7 1032 aa11.93□□□□□ -0.5
ATP2C1-204ENST00000428331 NUCKS1Q9H1E3 243 aaKnown RBP11.93□□□□□ -0.5
ATP2C1-204ENST00000428331 ERVV-1B6SEH8 477 aa11.93□□□□□ -0.5
ATP2C1-204ENST00000428331 NAPAP54920 295 aa11.93□□□□□ -0.5
ATP2C1-204ENST00000428331 GUCY2DQ02846 1103 aa11.93□□□□□ -0.5
ATP2C1-204ENST00000428331 NKX1-1Q15270 411 aaPredicted RBP11.93□□□□□ -0.5
ATP2C1-204ENST00000428331 IFI16Q16666 785 aaKnown RBP11.93□□□□□ -0.5
ATP2C1-204ENST00000428331 RASGRP4Q8TDF6 673 aa11.93□□□□□ -0.5
ATP2C1-204ENST00000428331 C6orf50Q9HD87 102 aa11.93□□□□□ -0.5
ATP2C1-204ENST00000428331 STX8Q9UNK0 236 aa11.93□□□□□ -0.5
ATP2C1-204ENST00000428331 GNA11P29992 359 aa11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 MRPS25P82663 173 aaKnown RBP11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 PARP10Q53GL7 1025 aa11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 CCDC114Q96M63 670 aa11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 MLXIPQ9HAP2 919 aa11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 ZBTB1Q9Y2K1 713 aa11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 MST1RQ04912 1400 aa11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 TNS3Q68CZ2 1445 aa11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 SSBP05455 408 aaKnown RBP eCLIP11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 PRLRP16471 622 aa11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 ITIH3Q06033 890 aa11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 CHRNDQ07001 517 aa11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 SUGP1Q8IWZ8 645 aaKnown RBP11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 CCSER1Q9C0I3 900 aa11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 EPB41L5Q9HCM4 733 aa11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 MCM9Q9NXL9 1143 aa11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 DMGDHQ9UI17 866 aaKnown RBP11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 DUSP10Q9Y6W6 482 aa11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 HEXIM1O94992 359 aaKnown RBP11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 GUCY2FP51841 1108 aa11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 DYNLL1P63167 89 aaKnown RBP11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 MAN2A1Q16706 1144 aa11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 NFRKBQ6P4R8 1299 aa11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 KRT25Q7Z3Z0 450 aa11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 NDST4Q9H3R1 872 aa11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 BUB1O43683 1085 aa11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 OR52Z1P0C646 297 aa11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 HPDP32754 393 aaPredicted RBP11.92□□□□□ -0.5
ATP2C1-204ENST00000428331 ATP6V1AP38606 617 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms