RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 LNPKQ9C0E8 428 aa15.43■□□□□ 0.06
DEPDC7-203ENST00000427755 RANBP17Q9H2T7 1088 aaKnown RBP15.43■□□□□ 0.06
DEPDC7-203ENST00000427755 TTYH1Q9H313 450 aaPredicted RBP15.43■□□□□ 0.06
DEPDC7-203ENST00000427755 SEMA6BQ9H3T3 888 aa15.43■□□□□ 0.06
DEPDC7-203ENST00000427755 SPC25Q9HBM1 224 aa15.43■□□□□ 0.06
DEPDC7-203ENST00000427755 TCP11L1Q9NUJ3 509 aa15.43■□□□□ 0.06
DEPDC7-203ENST00000427755 MTMR7Q9Y216 660 aa15.43■□□□□ 0.06
DEPDC7-203ENST00000427755 PLXNA1Q9UIW2 1896 aa15.43■□□□□ 0.06
DEPDC7-203ENST00000427755 ZMYM6O95789 1325 aa15.43■□□□□ 0.06
DEPDC7-203ENST00000427755 A0A0U1RQG5 324 aaPredicted RBP15.42■□□□□ 0.06
DEPDC7-203ENST00000427755 ARVCFO00192 962 aa15.42■□□□□ 0.06
DEPDC7-203ENST00000427755 TIMP1P01033 207 aa15.42■□□□□ 0.06
DEPDC7-203ENST00000427755 ICAM1P05362 532 aa15.42■□□□□ 0.06
DEPDC7-203ENST00000427755 PTGS1P23219 599 aa15.42■□□□□ 0.06
DEPDC7-203ENST00000427755 SLC16A2P36021 539 aa15.42■□□□□ 0.06
DEPDC7-203ENST00000427755 TNFAIP2Q03169 654 aa15.42■□□□□ 0.06
DEPDC7-203ENST00000427755 FPGSQ05932 587 aa15.42■□□□□ 0.06
DEPDC7-203ENST00000427755 CCDC96Q2M329 555 aa15.42■□□□□ 0.06
DEPDC7-203ENST00000427755 SMC5Q8IY18 1101 aa15.42■□□□□ 0.06
DEPDC7-203ENST00000427755 RNPC3Q96LT9 517 aaKnown RBP15.42■□□□□ 0.06
DEPDC7-203ENST00000427755 TMEM47Q9BQJ4 181 aa15.42■□□□□ 0.06
DEPDC7-203ENST00000427755 CCPG1Q9ULG6 757 aa15.42■□□□□ 0.06
DEPDC7-203ENST00000427755 MYH4Q9Y623 1939 aa15.41■□□□□ 0.06
DEPDC7-203ENST00000427755 TOP1P11387 765 aaKnown RBP15.41■□□□□ 0.06
DEPDC7-203ENST00000427755 SMPD1P17405 629 aa15.41■□□□□ 0.06
DEPDC7-203ENST00000427755 BEX3Q00994 111 aa15.41■□□□□ 0.06
DEPDC7-203ENST00000427755 RRP12Q5JTH9 1297 aaKnown RBP15.41■□□□□ 0.06
DEPDC7-203ENST00000427755 TAPT1Q6NXT6 567 aa15.41■□□□□ 0.06
DEPDC7-203ENST00000427755 FAM126BQ8IXS8 530 aa15.41■□□□□ 0.06
DEPDC7-203ENST00000427755 MORC4Q8TE76 937 aa15.41■□□□□ 0.06
DEPDC7-203ENST00000427755 PURBQ96QR8 312 aaKnown RBP15.41■□□□□ 0.06
DEPDC7-203ENST00000427755 CDX2Q99626 313 aaPredicted RBP15.41■□□□□ 0.06
DEPDC7-203ENST00000427755 PDGFCQ9NRA1 345 aa15.41■□□□□ 0.06
DEPDC7-203ENST00000427755 TOMM22Q9NS69 142 aa15.41■□□□□ 0.06
DEPDC7-203ENST00000427755 MROH7Q68CQ1 1323 aa15.41■□□□□ 0.06
DEPDC7-203ENST00000427755 CCDC171Q6TFL3 1326 aa15.41■□□□□ 0.06
DEPDC7-203ENST00000427755 PDHBP11177 359 aa15.4■□□□□ 0.06
DEPDC7-203ENST00000427755 HAND2P61296 217 aa15.4■□□□□ 0.06
DEPDC7-203ENST00000427755 TMEM63BQ5T3F8 832 aa15.4■□□□□ 0.06
DEPDC7-203ENST00000427755 SYDE2Q5VT97 1194 aa15.4■□□□□ 0.06
DEPDC7-203ENST00000427755 MFSD5Q6N075 450 aa15.4■□□□□ 0.06
DEPDC7-203ENST00000427755 NSMFQ6X4W1 530 aa15.4■□□□□ 0.06
DEPDC7-203ENST00000427755 TLK2Q86UE8 772 aa15.4■□□□□ 0.06
DEPDC7-203ENST00000427755 TBC1D10CQ8IV04 446 aa15.4■□□□□ 0.06
DEPDC7-203ENST00000427755 FBXO16Q8IX29 292 aaPredicted RBP15.4■□□□□ 0.06
DEPDC7-203ENST00000427755 SLC43A3Q8NBI5 491 aa15.4■□□□□ 0.06
DEPDC7-203ENST00000427755 FRMPD2Q68DX3 1309 aaPredicted RBP15.4■□□□□ 0.06
DEPDC7-203ENST00000427755 NFIBO00712 420 aa15.39■□□□□ 0.05
DEPDC7-203ENST00000427755 CD4P01730 458 aa15.39■□□□□ 0.05
DEPDC7-203ENST00000427755 SNHG28P0DPA3 235 aa15.39■□□□□ 0.05
DEPDC7-203ENST00000427755 AAMPQ13685 434 aa15.39■□□□□ 0.05
DEPDC7-203ENST00000427755 BAATQ14032 418 aaPredicted RBP15.39■□□□□ 0.05
DEPDC7-203ENST00000427755 AKNAD1Q5T1N1 836 aa15.39■□□□□ 0.05
DEPDC7-203ENST00000427755 CXCL17Q6UXB2 119 aa15.39■□□□□ 0.05
DEPDC7-203ENST00000427755 NOL8Q76FK4 1167 aaKnown RBP15.39■□□□□ 0.05
DEPDC7-203ENST00000427755 C16orf59Q7L2K0 433 aa15.39■□□□□ 0.05
DEPDC7-203ENST00000427755 EEPD1Q7L9B9 569 aa15.39■□□□□ 0.05
DEPDC7-203ENST00000427755 PLEKHM2Q8IWE5 1019 aa15.39■□□□□ 0.05
DEPDC7-203ENST00000427755 VTI1AQ96AJ9 217 aa15.39■□□□□ 0.05
DEPDC7-203ENST00000427755 GPCPD1Q9NPB8 672 aa15.39■□□□□ 0.05
DEPDC7-203ENST00000427755 GRIN2DO15399 1336 aa15.39■□□□□ 0.05
DEPDC7-203ENST00000427755 TRIM6-TRIM34B2RNG4 842 aa15.38■□□□□ 0.05
DEPDC7-203ENST00000427755 DYNC1LI2O43237 492 aaPredicted RBP15.38■□□□□ 0.05
DEPDC7-203ENST00000427755 IGHDP01880 384 aa15.38■□□□□ 0.05
DEPDC7-203ENST00000427755 PCP11498 1178 aaKnown RBP15.38■□□□□ 0.05
DEPDC7-203ENST00000427755 SDSP20132 328 aa15.38■□□□□ 0.05
DEPDC7-203ENST00000427755 ZNF543Q08ER8 600 aa15.38■□□□□ 0.05
DEPDC7-203ENST00000427755 FSCN1Q16658 493 aaKnown RBP15.38■□□□□ 0.05
DEPDC7-203ENST00000427755 IQSEC1Q6DN90 963 aa15.38■□□□□ 0.05
DEPDC7-203ENST00000427755 CLEC4DQ8WXI8 215 aa15.38■□□□□ 0.05
DEPDC7-203ENST00000427755 RILPL2Q969X0 211 aa15.38■□□□□ 0.05
DEPDC7-203ENST00000427755 TTC14Q96N46 770 aa15.38■□□□□ 0.05
DEPDC7-203ENST00000427755 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.38■□□□□ 0.05
DEPDC7-203ENST00000427755 OSBPL3Q9H4L5 887 aa15.38■□□□□ 0.05
DEPDC7-203ENST00000427755 VTA1Q9NP79 307 aa15.38■□□□□ 0.05
DEPDC7-203ENST00000427755 Q9Y3F1 56 aa15.38■□□□□ 0.05
DEPDC7-203ENST00000427755 TMEM265A0A087WTH1 108 aa15.37■□□□□ 0.05
DEPDC7-203ENST00000427755 CABYRO75952 493 aa15.37■□□□□ 0.05
DEPDC7-203ENST00000427755 CSF2RAP15509 400 aa15.37■□□□□ 0.05
DEPDC7-203ENST00000427755 ALDH5A1P51649 535 aaPredicted RBP15.37■□□□□ 0.05
DEPDC7-203ENST00000427755 NUCB1Q02818 461 aa15.37■□□□□ 0.05
DEPDC7-203ENST00000427755 PPIGQ13427 754 aaKnown RBP eCLIP15.37■□□□□ 0.05
DEPDC7-203ENST00000427755 TMEM240Q5SV17 173 aa15.37■□□□□ 0.05
DEPDC7-203ENST00000427755 RASIP1Q5U651 963 aa15.37■□□□□ 0.05
DEPDC7-203ENST00000427755 B4GALNT3Q6L9W6 998 aa15.37■□□□□ 0.05
DEPDC7-203ENST00000427755 MFSD6Q6ZSS7 791 aa15.37■□□□□ 0.05
DEPDC7-203ENST00000427755 CHD1LQ86WJ1 897 aa15.37■□□□□ 0.05
DEPDC7-203ENST00000427755 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.37■□□□□ 0.05
DEPDC7-203ENST00000427755 RWDD1Q9H446 243 aaPredicted RBP15.37■□□□□ 0.05
DEPDC7-203ENST00000427755 NEDD4P46934 1319 aa15.37■□□□□ 0.05
DEPDC7-203ENST00000427755 LAMA2P24043 3122 aaKnown RBP15.37■□□□□ 0.05
DEPDC7-203ENST00000427755 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.36■□□□□ 0.05
DEPDC7-203ENST00000427755 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.36■□□□□ 0.05
DEPDC7-203ENST00000427755 TLR3O15455 904 aaKnown RBP15.36■□□□□ 0.05
DEPDC7-203ENST00000427755 ITGA7Q13683 1181 aa15.36■□□□□ 0.05
DEPDC7-203ENST00000427755 SLC30A10Q6XR72 485 aa15.36■□□□□ 0.05
DEPDC7-203ENST00000427755 KIAA1211Q6ZU35 1233 aa15.36■□□□□ 0.05
DEPDC7-203ENST00000427755 MYLIPQ8WY64 445 aa15.36■□□□□ 0.05
DEPDC7-203ENST00000427755 PPP1R12CQ9BZL4 782 aa15.36■□□□□ 0.05
DEPDC7-203ENST00000427755 AP5M1Q9H0R1 490 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms