RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 SPDYE2Q495Y8 402 aa15.71■□□□□ 0.11
PTPN13-203ENST00000427191 RASGRF2O14827 1237 aa15.71■□□□□ 0.11
PTPN13-203ENST00000427191 ARHGEF9O43307 516 aa15.71■□□□□ 0.11
PTPN13-203ENST00000427191 CHEK2O96017 543 aa15.71■□□□□ 0.11
PTPN13-203ENST00000427191 TMOD1P28289 359 aa15.71■□□□□ 0.11
PTPN13-203ENST00000427191 TEDDM1Q5T9Z0 273 aa15.71■□□□□ 0.11
PTPN13-203ENST00000427191 LPIN2Q92539 896 aa15.71■□□□□ 0.11
PTPN13-203ENST00000427191 JPH2Q9BR39 696 aaPredicted RBP15.71■□□□□ 0.11
PTPN13-203ENST00000427191 BCL2L12Q9HB09 334 aa15.71■□□□□ 0.11
PTPN13-203ENST00000427191 BIN2Q9UBW5 565 aaPredicted RBP15.71■□□□□ 0.11
PTPN13-203ENST00000427191 ATP8B3O60423 1300 aa15.71■□□□□ 0.11
PTPN13-203ENST00000427191 ZNF189O75820 626 aaPredicted RBP15.71■□□□□ 0.11
PTPN13-203ENST00000427191 RXRAP19793 462 aa15.71■□□□□ 0.11
PTPN13-203ENST00000427191 PDE1BQ01064 536 aa15.71■□□□□ 0.11
PTPN13-203ENST00000427191 PBKQ96KB5 322 aa15.71■□□□□ 0.11
PTPN13-203ENST00000427191 ARHGDIAP52565 204 aa15.71■□□□□ 0.11
PTPN13-203ENST00000427191 ZNF713Q8N859 430 aaPredicted RBP15.71■□□□□ 0.11
PTPN13-203ENST00000427191 BEGAINQ9BUH8 593 aa15.71■□□□□ 0.11
PTPN13-203ENST00000427191 SLC13A4Q9UKG4 626 aa15.71■□□□□ 0.11
PTPN13-203ENST00000427191 PRAG1Q86YV5 1406 aa15.71■□□□□ 0.11
PTPN13-203ENST00000427191 MCF2LO15068 1137 aa15.71■□□□□ 0.11
PTPN13-203ENST00000427191 PDE8AO60658 829 aa15.71■□□□□ 0.11
PTPN13-203ENST00000427191 DCTN3O75935 186 aa15.71■□□□□ 0.11
PTPN13-203ENST00000427191 GPBP1Q86WP2 473 aa15.71■□□□□ 0.11
PTPN13-203ENST00000427191 DHX38Q92620 1227 aaKnown RBP15.71■□□□□ 0.11
PTPN13-203ENST00000427191 LRRC37BQ96QE4 947 aa15.71■□□□□ 0.11
PTPN13-203ENST00000427191 PA2G4Q9UQ80 394 aaKnown RBP15.71■□□□□ 0.11
PTPN13-203ENST00000427191 SH3TC1Q8TE82 1336 aa15.71■□□□□ 0.1
PTPN13-203ENST00000427191 A0A087WUV0 522 aaPredicted RBP15.7■□□□□ 0.1
PTPN13-203ENST00000427191 H2AFZP0C0S5 128 aa15.7■□□□□ 0.1
PTPN13-203ENST00000427191 H2AFVQ71UI9 128 aa15.7■□□□□ 0.1
PTPN13-203ENST00000427191 LRRC8AQ8IWT6 810 aa15.7■□□□□ 0.1
PTPN13-203ENST00000427191 ACTN1P12814 892 aa15.7■□□□□ 0.1
PTPN13-203ENST00000427191 PTK2Q05397 1052 aa15.7■□□□□ 0.1
PTPN13-203ENST00000427191 TRIM60Q495X7 471 aa15.7■□□□□ 0.1
PTPN13-203ENST00000427191 TMCO4Q5TGY1 634 aa15.7■□□□□ 0.1
PTPN13-203ENST00000427191 FBXO31Q5XUX0 539 aaPredicted RBP15.7■□□□□ 0.1
PTPN13-203ENST00000427191 KRT40Q6A162 431 aa15.7■□□□□ 0.1
PTPN13-203ENST00000427191 NOSTRINQ8IVI9 506 aa15.7■□□□□ 0.1
PTPN13-203ENST00000427191 FBXL13Q8NEE6 735 aa15.7■□□□□ 0.1
PTPN13-203ENST00000427191 MAPK8IP1Q9UQF2 711 aa15.7■□□□□ 0.1
PTPN13-203ENST00000427191 A0A1B0GW55 424 aa15.7■□□□□ 0.1
PTPN13-203ENST00000427191 DUX4L2P0CJ85 424 aa15.7■□□□□ 0.1
PTPN13-203ENST00000427191 DUX4L3P0CJ86 424 aa15.7■□□□□ 0.1
PTPN13-203ENST00000427191 DUX4L4P0CJ87 422 aa15.7■□□□□ 0.1
PTPN13-203ENST00000427191 DUX4L5P0CJ88 424 aa15.7■□□□□ 0.1
PTPN13-203ENST00000427191 DUX4L6P0CJ89 424 aa15.7■□□□□ 0.1
PTPN13-203ENST00000427191 DUX4L7P0CJ90 424 aa15.7■□□□□ 0.1
PTPN13-203ENST00000427191 MYCLP12524 364 aaPredicted RBP15.7■□□□□ 0.1
PTPN13-203ENST00000427191 GFAPP14136 432 aa15.7■□□□□ 0.1
PTPN13-203ENST00000427191 CUL1Q13616 776 aa15.7■□□□□ 0.1
PTPN13-203ENST00000427191 PKD2L1Q9P0L9 805 aa15.7■□□□□ 0.1
PTPN13-203ENST00000427191 DUX4Q9UBX2 424 aa15.7■□□□□ 0.1
PTPN13-203ENST00000427191 PSMB7Q99436 277 aa15.7■□□□□ 0.1
PTPN13-203ENST00000427191 ST7Q9NRC1 585 aa15.7■□□□□ 0.1
PTPN13-203ENST00000427191 NR1H3Q13133 447 aa15.7■□□□□ 0.1
PTPN13-203ENST00000427191 RAPH1Q70E73 1250 aa15.7■□□□□ 0.1
PTPN13-203ENST00000427191 AK8Q96MA6 479 aa15.7■□□□□ 0.1
PTPN13-203ENST00000427191 CPP00450 1065 aa15.7■□□□□ 0.1
PTPN13-203ENST00000427191 MFAP3P55082 362 aa15.7■□□□□ 0.1
PTPN13-203ENST00000427191 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.7■□□□□ 0.1
PTPN13-203ENST00000427191 FAM135BQ49AJ0 1406 aa15.7■□□□□ 0.1
PTPN13-203ENST00000427191 C8orf58Q8NAV2 365 aa15.7■□□□□ 0.1
PTPN13-203ENST00000427191 ADGBQ8N7X0 1667 aa15.69■□□□□ 0.1
PTPN13-203ENST00000427191 PEX19P40855 299 aa15.69■□□□□ 0.1
PTPN13-203ENST00000427191 CHRNA2Q15822 529 aa15.69■□□□□ 0.1
PTPN13-203ENST00000427191 RNF207Q6ZRF8 634 aa15.69■□□□□ 0.1
PTPN13-203ENST00000427191 BZW1Q7L1Q6 419 aaKnown RBP15.69■□□□□ 0.1
PTPN13-203ENST00000427191 EXOC4Q96A65 974 aa15.69■□□□□ 0.1
PTPN13-203ENST00000427191 SNX14Q9Y5W7 946 aa15.69■□□□□ 0.1
PTPN13-203ENST00000427191 TRAPPC10P48553 1259 aa15.69■□□□□ 0.1
PTPN13-203ENST00000427191 SPATA1Q5VX52 437 aa15.69■□□□□ 0.1
PTPN13-203ENST00000427191 ZNF148Q9UQR1 794 aa15.69■□□□□ 0.1
PTPN13-203ENST00000427191 ATP2B4P23634 1241 aa15.69■□□□□ 0.1
PTPN13-203ENST00000427191 IGBP1P78318 339 aa15.69■□□□□ 0.1
PTPN13-203ENST00000427191 OCA2Q04671 838 aa15.69■□□□□ 0.1
PTPN13-203ENST00000427191 ARHGAP44Q17R89 818 aa15.69■□□□□ 0.1
PTPN13-203ENST00000427191 VAMP4O75379 141 aa15.69■□□□□ 0.1
PTPN13-203ENST00000427191 PDE6AP16499 860 aa15.69■□□□□ 0.1
PTPN13-203ENST00000427191 MSH2P43246 934 aa15.69■□□□□ 0.1
PTPN13-203ENST00000427191 SNX1Q13596 522 aa15.69■□□□□ 0.1
PTPN13-203ENST00000427191 FAM178BQ8IXR5 827 aa15.69■□□□□ 0.1
PTPN13-203ENST00000427191 PANK4Q9NVE7 773 aa15.69■□□□□ 0.1
PTPN13-203ENST00000427191 DDAH1O94760 285 aa15.69■□□□□ 0.1
PTPN13-203ENST00000427191 GAP43P17677 238 aa15.69■□□□□ 0.1
PTPN13-203ENST00000427191 ATP1A2P50993 1020 aa15.69■□□□□ 0.1
PTPN13-203ENST00000427191 YWHAGP61981 247 aaKnown RBP eCLIP15.69■□□□□ 0.1
PTPN13-203ENST00000427191 PABPC4Q13310 644 aaKnown RBP eCLIP15.69■□□□□ 0.1
PTPN13-203ENST00000427191 ART3Q13508 389 aa15.69■□□□□ 0.1
PTPN13-203ENST00000427191 POLKQ9UBT6 870 aa15.69■□□□□ 0.1
PTPN13-203ENST00000427191 SLC12A6Q9UHW9 1150 aa15.69■□□□□ 0.1
PTPN13-203ENST00000427191 ZMYM6O95789 1325 aa15.69■□□□□ 0.1
PTPN13-203ENST00000427191 NBPF10Q6P3W6 841 aaKnown RBP15.69■□□□□ 0.1
PTPN13-203ENST00000427191 MED7O43513 233 aa15.68■□□□□ 0.1
PTPN13-203ENST00000427191 IGSF3O75054 1194 aa15.68■□□□□ 0.1
PTPN13-203ENST00000427191 SERPINB2P05120 415 aa15.68■□□□□ 0.1
PTPN13-203ENST00000427191 CMA1P23946 247 aa15.68■□□□□ 0.1
PTPN13-203ENST00000427191 TFDP1Q14186 410 aa15.68■□□□□ 0.1
PTPN13-203ENST00000427191 MRPL47Q9HD33 250 aaKnown RBP15.68■□□□□ 0.1
PTPN13-203ENST00000427191 NT5C2P49902 561 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms