RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 CNTN2Q02246 1040 aa20.08■□□□□ 0.8
LMCD1-204ENST00000426878 CDC37Q16543 378 aaPredicted RBP20.08■□□□□ 0.8
LMCD1-204ENST00000426878 PRAMEF19Q5SWL8 479 aa20.08■□□□□ 0.8
LMCD1-204ENST00000426878 RGS22Q8NE09 1264 aa20.08■□□□□ 0.8
LMCD1-204ENST00000426878 MTMR8Q96EF0 704 aa20.08■□□□□ 0.8
LMCD1-204ENST00000426878 NFIBO00712 420 aa20.07■□□□□ 0.8
LMCD1-204ENST00000426878 DDAH1O94760 285 aa20.07■□□□□ 0.8
LMCD1-204ENST00000426878 ZNF865P0CJ78 1059 aaPredicted RBP20.07■□□□□ 0.8
LMCD1-204ENST00000426878 HSPA4P34932 840 aa20.07■□□□□ 0.8
LMCD1-204ENST00000426878 EXOSC10Q01780 885 aaKnown RBP20.07■□□□□ 0.8
LMCD1-204ENST00000426878 NECAB2Q7Z6G3 386 aa20.07■□□□□ 0.8
LMCD1-204ENST00000426878 GPHNQ9NQX3 736 aaPredicted RBP20.07■□□□□ 0.8
LMCD1-204ENST00000426878 CNPY2Q9Y2B0 182 aa20.07■□□□□ 0.8
LMCD1-204ENST00000426878 FRMPD3Q5JV73 1810 aa20.07■□□□□ 0.8
LMCD1-204ENST00000426878 SOWAHBA6NEL2 793 aa20.06■□□□□ 0.8
LMCD1-204ENST00000426878 TAL1P17542 331 aaPredicted RBP20.06■□□□□ 0.8
LMCD1-204ENST00000426878 QRICH1Q2TAL8 776 aa20.06■□□□□ 0.8
LMCD1-204ENST00000426878 NSMFQ6X4W1 530 aa20.06■□□□□ 0.8
LMCD1-204ENST00000426878 DHX32Q7L7V1 743 aaKnown RBP20.06■□□□□ 0.8
LMCD1-204ENST00000426878 SGMS1Q86VZ5 419 aa20.06■□□□□ 0.8
LMCD1-204ENST00000426878 ZNF654Q8IZM8 581 aa20.06■□□□□ 0.8
LMCD1-204ENST00000426878 PAWRQ96IZ0 340 aaKnown RBP20.06■□□□□ 0.8
LMCD1-204ENST00000426878 RIOX1Q9H6W3 641 aa20.06■□□□□ 0.8
LMCD1-204ENST00000426878 LOC102724159A0A0B4J2E5 919 aa20.05■□□□□ 0.8
LMCD1-204ENST00000426878 ASB14A6NK59 587 aa20.05■□□□□ 0.8
LMCD1-204ENST00000426878 HMGB1P09429 215 aaKnown RBP20.05■□□□□ 0.8
LMCD1-204ENST00000426878 PWP2Q15269 919 aaKnown RBP20.05■□□□□ 0.8
LMCD1-204ENST00000426878 ADCK5Q3MIX3 580 aa20.05■□□□□ 0.8
LMCD1-204ENST00000426878 HTATIP2Q9BUP3 242 aa20.05■□□□□ 0.8
LMCD1-204ENST00000426878 ABHD16BQ9H3Z7 469 aa20.05■□□□□ 0.8
LMCD1-204ENST00000426878 VAT1LQ9HCJ6 419 aa20.05■□□□□ 0.8
LMCD1-204ENST00000426878 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.05■□□□□ 0.8
LMCD1-204ENST00000426878 ABCB11O95342 1321 aa20.04■□□□□ 0.8
LMCD1-204ENST00000426878 CCDC69A6NI79 296 aa20.04■□□□□ 0.8
LMCD1-204ENST00000426878 ZBTB5O15062 677 aa20.04■□□□□ 0.8
LMCD1-204ENST00000426878 DHX16O60231 1041 aaKnown RBP20.04■□□□□ 0.8
LMCD1-204ENST00000426878 SMARCA1P28370 1054 aa20.04■□□□□ 0.8
LMCD1-204ENST00000426878 KIF5BP33176 963 aa20.04■□□□□ 0.8
LMCD1-204ENST00000426878 BAATQ14032 418 aaPredicted RBP20.04■□□□□ 0.8
LMCD1-204ENST00000426878 SLC35G1Q2M3R5 365 aa20.04■□□□□ 0.8
LMCD1-204ENST00000426878 ARMCX2Q7L311 632 aa20.04■□□□□ 0.8
LMCD1-204ENST00000426878 FBXO11Q86XK2 927 aa20.04■□□□□ 0.8
LMCD1-204ENST00000426878 CCDC144CPQ8IYA2 1237 aa20.04■□□□□ 0.8
LMCD1-204ENST00000426878 MYH6P13533 1939 aa20.04■□□□□ 0.8
LMCD1-204ENST00000426878 ASTN1O14525 1302 aa20.03■□□□□ 0.8
LMCD1-204ENST00000426878 CALM1P0DP23 149 aa20.03■□□□□ 0.8
LMCD1-204ENST00000426878 CALM2P0DP24 149 aa20.03■□□□□ 0.8
LMCD1-204ENST00000426878 CALM3P0DP25 149 aa20.03■□□□□ 0.8
LMCD1-204ENST00000426878 ACVR2BQ13705 512 aa20.03■□□□□ 0.8
LMCD1-204ENST00000426878 USH1GQ495M9 461 aa20.03■□□□□ 0.8
LMCD1-204ENST00000426878 NFXL1Q6ZNB6 911 aa20.03■□□□□ 0.8
LMCD1-204ENST00000426878 RNF207Q6ZRF8 634 aa20.03■□□□□ 0.8
LMCD1-204ENST00000426878 ARRDC4Q8NCT1 418 aa20.03■□□□□ 0.8
LMCD1-204ENST00000426878 CTCFLQ8NI51 663 aaPredicted RBP20.03■□□□□ 0.8
LMCD1-204ENST00000426878 MORC4Q8TE76 937 aa20.03■□□□□ 0.8
LMCD1-204ENST00000426878 DIS3LQ8TF46 1054 aaKnown RBP20.03■□□□□ 0.8
LMCD1-204ENST00000426878 NUP133Q8WUM0 1156 aa20.03■□□□□ 0.8
LMCD1-204ENST00000426878 AMNQ9BXJ7 453 aa20.03■□□□□ 0.8
LMCD1-204ENST00000426878 ADD3Q9UEY8 706 aaKnown RBP20.03■□□□□ 0.8
LMCD1-204ENST00000426878 MCM3APO60318 1980 aa20.03■□□□□ 0.8
LMCD1-204ENST00000426878 LCTP09848 1927 aa20.03■□□□□ 0.8
LMCD1-204ENST00000426878 PTPDC1A2A3K4 754 aa20.02■□□□□ 0.8
LMCD1-204ENST00000426878 CYTH3O43739 400 aa20.02■□□□□ 0.8
LMCD1-204ENST00000426878 COL6A1P12109 1028 aa20.02■□□□□ 0.8
LMCD1-204ENST00000426878 AKR1A1P14550 325 aa20.02■□□□□ 0.8
LMCD1-204ENST00000426878 RPS6P62753 249 aaKnown RBP20.02■□□□□ 0.8
LMCD1-204ENST00000426878 TRAF1Q13077 416 aa20.02■□□□□ 0.8
LMCD1-204ENST00000426878 LZTS2Q9BRK4 669 aa20.02■□□□□ 0.8
LMCD1-204ENST00000426878 KATNBL1Q9H079 304 aa20.02■□□□□ 0.8
LMCD1-204ENST00000426878 FAM184BQ9ULE4 1060 aa20.02■□□□□ 0.8
LMCD1-204ENST00000426878 MRPL11Q9Y3B7 192 aaKnown RBP20.02■□□□□ 0.8
LMCD1-204ENST00000426878 SNX14Q9Y5W7 946 aa20.02■□□□□ 0.8
LMCD1-204ENST00000426878 SLC12A7Q9Y666 1083 aa20.02■□□□□ 0.8
LMCD1-204ENST00000426878 DNM1LO00429 736 aa20.02■□□□□ 0.79
LMCD1-204ENST00000426878 RARBP10826 455 aa20.02■□□□□ 0.79
LMCD1-204ENST00000426878 GNAQP50148 359 aa20.02■□□□□ 0.79
LMCD1-204ENST00000426878 SLC30A10Q6XR72 485 aa20.02■□□□□ 0.79
LMCD1-204ENST00000426878 MCF2L2Q86YR7 1114 aa20.02■□□□□ 0.79
LMCD1-204ENST00000426878 SPZ1Q9BXG8 430 aa20.02■□□□□ 0.79
LMCD1-204ENST00000426878 LRRC2Q9BYS8 371 aa20.02■□□□□ 0.79
LMCD1-204ENST00000426878 C11orf49Q9H6J7 331 aa20.02■□□□□ 0.79
LMCD1-204ENST00000426878 BAZ2BQ9UIF8 2168 aaKnown RBP20.02■□□□□ 0.79
LMCD1-204ENST00000426878 DNAH12Q6ZR08 3092 aa20.01■□□□□ 0.79
LMCD1-204ENST00000426878 PNMA6FA0A0J9YX94 578 aa20.01■□□□□ 0.79
LMCD1-204ENST00000426878 PPP1R11O60927 126 aaPredicted RBP20.01■□□□□ 0.79
LMCD1-204ENST00000426878 GHRHRQ02643 423 aa20.01■□□□□ 0.79
LMCD1-204ENST00000426878 PRPF38BQ5VTL8 546 aaKnown RBP20.01■□□□□ 0.79
LMCD1-204ENST00000426878 DNERQ8NFT8 737 aa20.01■□□□□ 0.79
LMCD1-204ENST00000426878 MYL10Q9BUA6 226 aa20.01■□□□□ 0.79
LMCD1-204ENST00000426878 USP26Q9BXU7 913 aa20.01■□□□□ 0.79
LMCD1-204ENST00000426878 CALML3P27482 149 aa20■□□□□ 0.79
LMCD1-204ENST00000426878 ALDH5A1P51649 535 aaPredicted RBP20■□□□□ 0.79
LMCD1-204ENST00000426878 ANO1Q5XXA6 986 aa20■□□□□ 0.79
LMCD1-204ENST00000426878 FBXL16Q8N461 479 aa20■□□□□ 0.79
LMCD1-204ENST00000426878 PURBQ96QR8 312 aaKnown RBP20■□□□□ 0.79
LMCD1-204ENST00000426878 PIGSQ96S52 555 aa20■□□□□ 0.79
LMCD1-204ENST00000426878 ZHX1Q9UKY1 873 aaPredicted RBP20■□□□□ 0.79
LMCD1-204ENST00000426878 PCDHA1Q9Y5I3 950 aa20■□□□□ 0.79
LMCD1-204ENST00000426878 DUSP11O75319 330 aaKnown RBP19.99■□□□□ 0.79
LMCD1-204ENST00000426878 PSMA5P28066 241 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms