RNA–Protein interactions for RNA: ENST00000426828.5

CCT6P3-202, Transcript of chaperonin containing TCP1 subunit 6 pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CCT6P3, Length 2,238 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6P3-202ENST00000426828 VWA5AO00534 786 aa13.23□□□□□ -0.29
CCT6P3-202ENST00000426828 CCDC192P0DO97 292 aa13.23□□□□□ -0.29
CCT6P3-202ENST00000426828 RXRAP19793 462 aa13.23□□□□□ -0.29
CCT6P3-202ENST00000426828 FUT2Q10981 343 aa13.23□□□□□ -0.29
CCT6P3-202ENST00000426828 PPP2R5BQ15173 497 aa13.23□□□□□ -0.29
CCT6P3-202ENST00000426828 SYNE3Q6ZMZ3 975 aa13.23□□□□□ -0.29
CCT6P3-202ENST00000426828 TMTC3Q6ZXV5 915 aa13.23□□□□□ -0.29
CCT6P3-202ENST00000426828 RAB11FIP4Q86YS3 637 aa13.23□□□□□ -0.29
CCT6P3-202ENST00000426828 MB21D1Q8N884 522 aa13.23□□□□□ -0.29
CCT6P3-202ENST00000426828 CTCFLQ8NI51 663 aaPredicted RBP13.23□□□□□ -0.29
CCT6P3-202ENST00000426828 FAM200AQ8TCP9 573 aa13.23□□□□□ -0.29
CCT6P3-202ENST00000426828 CHMP4CQ96CF2 233 aa13.23□□□□□ -0.29
CCT6P3-202ENST00000426828 SLC38A10Q9HBR0 1119 aa13.23□□□□□ -0.29
CCT6P3-202ENST00000426828 TXNRD2Q9NNW7 524 aa13.23□□□□□ -0.29
CCT6P3-202ENST00000426828 GOLGA8AA7E2F4 631 aa13.22□□□□□ -0.29
CCT6P3-202ENST00000426828 TRPA1O75762 1119 aa13.22□□□□□ -0.29
CCT6P3-202ENST00000426828 FDX1P10109 184 aa13.22□□□□□ -0.29
CCT6P3-202ENST00000426828 CDC27P30260 824 aa13.22□□□□□ -0.29
CCT6P3-202ENST00000426828 SLC16A2P36021 539 aa13.22□□□□□ -0.29
CCT6P3-202ENST00000426828 RTN1Q16799 776 aa13.22□□□□□ -0.29
CCT6P3-202ENST00000426828 NBPF11Q86T75 865 aa13.22□□□□□ -0.29
CCT6P3-202ENST00000426828 LZTS2Q9BRK4 669 aa13.22□□□□□ -0.29
CCT6P3-202ENST00000426828 SPZ1Q9BXG8 430 aa13.22□□□□□ -0.29
CCT6P3-202ENST00000426828 RANBP17Q9H2T7 1088 aaKnown RBP13.22□□□□□ -0.29
CCT6P3-202ENST00000426828 RIOX1Q9H6W3 641 aa13.22□□□□□ -0.29
CCT6P3-202ENST00000426828 RBM28Q9NW13 759 aaKnown RBP13.22□□□□□ -0.29
CCT6P3-202ENST00000426828 BTBD7Q9P203 1132 aa13.22□□□□□ -0.29
CCT6P3-202ENST00000426828 RABGAP1Q9Y3P9 1069 aa13.22□□□□□ -0.29
CCT6P3-202ENST00000426828 COL11A1P12107 1806 aaPredicted RBP13.22□□□□□ -0.29
CCT6P3-202ENST00000426828 ATP2A1O14983 1001 aa13.21□□□□□ -0.29
CCT6P3-202ENST00000426828 CYTH3O43739 400 aa13.21□□□□□ -0.29
CCT6P3-202ENST00000426828 PFKFB2O60825 505 aa13.21□□□□□ -0.29
CCT6P3-202ENST00000426828 PLEKHA8P1O95397 391 aa13.21□□□□□ -0.29
CCT6P3-202ENST00000426828 LARGE1O95461 756 aa13.21□□□□□ -0.29
CCT6P3-202ENST00000426828 TBC1D8O95759 1140 aa13.21□□□□□ -0.29
CCT6P3-202ENST00000426828 U2AF2P26368 475 aaKnown RBP eCLIP13.21□□□□□ -0.295e-23■■■■□ 21.1
CCT6P3-202ENST00000426828 GNAQP50148 359 aa13.21□□□□□ -0.29
CCT6P3-202ENST00000426828 METAP2P50579 478 aaKnown RBP eCLIP13.21□□□□□ -0.29
CCT6P3-202ENST00000426828 DNM1Q05193 864 aaKnown RBP13.21□□□□□ -0.29
CCT6P3-202ENST00000426828 NCBP1Q09161 790 aaKnown RBP13.21□□□□□ -0.29
CCT6P3-202ENST00000426828 SRBD1Q8N5C6 995 aaKnown RBP13.21□□□□□ -0.29
CCT6P3-202ENST00000426828 KIFC2Q96AC6 838 aa13.21□□□□□ -0.29
CCT6P3-202ENST00000426828 LARP6Q9BRS8 491 aaKnown RBP13.21□□□□□ -0.29
CCT6P3-202ENST00000426828 UBA5Q9GZZ9 404 aa13.21□□□□□ -0.29
CCT6P3-202ENST00000426828 CPVLQ9H3G5 476 aa13.21□□□□□ -0.29
CCT6P3-202ENST00000426828 ELP1O95163 1332 aa13.21□□□□□ -0.29
CCT6P3-202ENST00000426828 OAZ1P54368 228 aa13.21□□□□□ -0.29
CCT6P3-202ENST00000426828 FAM110CQ1W6H9 321 aa13.21□□□□□ -0.29
CCT6P3-202ENST00000426828 CCDC144CPQ8IYA2 1237 aa13.21□□□□□ -0.29
CCT6P3-202ENST00000426828 ADGRF4Q8IZF3 695 aa13.21□□□□□ -0.29
CCT6P3-202ENST00000426828 SMCR8Q8TEV9 937 aaPredicted RBP13.21□□□□□ -0.29
CCT6P3-202ENST00000426828 JMJD4Q9H9V9 463 aa13.21□□□□□ -0.29
CCT6P3-202ENST00000426828 ZNF214Q9UL59 606 aaPredicted RBP13.21□□□□□ -0.29
CCT6P3-202ENST00000426828 ZNF536O15090 1300 aa13.21□□□□□ -0.3
CCT6P3-202ENST00000426828 GJB2P29033 226 aa13.2□□□□□ -0.3
CCT6P3-202ENST00000426828 TMEM132BQ14DG7 1078 aa13.2□□□□□ -0.3
CCT6P3-202ENST00000426828 ME3Q16798 604 aa13.2□□□□□ -0.3
CCT6P3-202ENST00000426828 SH2B1Q9NRF2 756 aaPredicted RBP13.2□□□□□ -0.3
CCT6P3-202ENST00000426828 OGFRQ9NZT2 677 aa13.2□□□□□ -0.3
CCT6P3-202ENST00000426828 CPA4Q9UI42 421 aa13.2□□□□□ -0.3
CCT6P3-202ENST00000426828 SPDYE4A6NLX3 237 aa13.2□□□□□ -0.3
CCT6P3-202ENST00000426828 SMTNL1A8MU46 457 aa13.2□□□□□ -0.3
CCT6P3-202ENST00000426828 PEX10O60683 326 aa13.2□□□□□ -0.3
CCT6P3-202ENST00000426828 PTGS1P23219 599 aa13.2□□□□□ -0.3
CCT6P3-202ENST00000426828 ST3GAL1Q11201 340 aa13.2□□□□□ -0.3
CCT6P3-202ENST00000426828 NTRK3Q16288 839 aa13.2□□□□□ -0.3
CCT6P3-202ENST00000426828 HOMEZQ8IX15 550 aa13.2□□□□□ -0.3
CCT6P3-202ENST00000426828 ANKRD13CQ8N6S4 541 aa13.2□□□□□ -0.3
CCT6P3-202ENST00000426828 ZSCAN31Q96LW9 406 aaPredicted RBP13.2□□□□□ -0.3
CCT6P3-202ENST00000426828 MRVI1Q9Y6F6 885 aa13.2□□□□□ -0.3
CCT6P3-202ENST00000426828 CNTNAP5Q8WYK1 1306 aa13.2□□□□□ -0.3
CCT6P3-202ENST00000426828 CCDC196A0A1B0GTZ2 297 aa13.19□□□□□ -0.3
CCT6P3-202ENST00000426828 ZBED4O75132 1171 aa13.19□□□□□ -0.3
CCT6P3-202ENST00000426828 PDIA4P13667 645 aaKnown RBP13.19□□□□□ -0.3
CCT6P3-202ENST00000426828 ADD1P35611 737 aaKnown RBP13.19□□□□□ -0.3
CCT6P3-202ENST00000426828 ERVK-9P63128 1117 aa13.19□□□□□ -0.3
CCT6P3-202ENST00000426828 ERVK-24P63145 666 aa13.19□□□□□ -0.3
CCT6P3-202ENST00000426828 SCRN1Q12765 414 aa13.19□□□□□ -0.3
CCT6P3-202ENST00000426828 IKQ13123 557 aaPredicted RBP13.19□□□□□ -0.3
CCT6P3-202ENST00000426828 RBM43Q6ZSC3 357 aaKnown RBP13.19□□□□□ -0.3
CCT6P3-202ENST00000426828 SPC24Q8NBT2 197 aa13.19□□□□□ -0.3
CCT6P3-202ENST00000426828 GPRC5AQ8NFJ5 357 aa13.19□□□□□ -0.3
CCT6P3-202ENST00000426828 PLCB2Q00722 1185 aa13.19□□□□□ -0.3
CCT6P3-202ENST00000426828 Q3C1V9 767 aa13.19□□□□□ -0.3
CCT6P3-202ENST00000426828 GTF3C6Q969F1 213 aa13.19□□□□□ -0.3
CCT6P3-202ENST00000426828 BEGAINQ9BUH8 593 aa13.19□□□□□ -0.3
CCT6P3-202ENST00000426828 SPATC1LQ9H0A9 340 aa13.19□□□□□ -0.3
CCT6P3-202ENST00000426828 NCOA5Q9HCD5 579 aaKnown RBP13.19□□□□□ -0.3
CCT6P3-202ENST00000426828 GPR25O00155 361 aa13.18□□□□□ -0.3
CCT6P3-202ENST00000426828 ICAM1P05362 532 aa13.18□□□□□ -0.3
CCT6P3-202ENST00000426828 IFNAR1P17181 557 aa13.18□□□□□ -0.3
CCT6P3-202ENST00000426828 SNAP25P60880 206 aa13.18□□□□□ -0.3
CCT6P3-202ENST00000426828 CCT2P78371 535 aaKnown RBP13.18□□□□□ -0.3
CCT6P3-202ENST00000426828 TYRO3Q06418 890 aa13.18□□□□□ -0.3
CCT6P3-202ENST00000426828 CDC37Q16543 378 aaPredicted RBP13.18□□□□□ -0.3
CCT6P3-202ENST00000426828 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.18□□□□□ -0.3
CCT6P3-202ENST00000426828 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.18□□□□□ -0.3
CCT6P3-202ENST00000426828 PLA2G4DQ86XP0 818 aa13.18□□□□□ -0.3
CCT6P3-202ENST00000426828 RIOX2Q8IUF8 465 aa13.18□□□□□ -0.3
CCT6P3-202ENST00000426828 SHCBP1Q8NEM2 672 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms