RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 ALDH8A1Q9H2A2 487 aaPredicted RBP17■□□□□ 0.31
HDAC6-206ENST00000426196 HOMER2Q9NSB8 354 aa17■□□□□ 0.31
HDAC6-206ENST00000426196 NYAP2Q9P242 653 aa17■□□□□ 0.31
HDAC6-206ENST00000426196 EXOC6BQ9Y2D4 811 aa17■□□□□ 0.31
HDAC6-206ENST00000426196 TET1Q8NFU7 2136 aa17■□□□□ 0.31
HDAC6-206ENST00000426196 PRR33A8MZF0 331 aa16.99■□□□□ 0.31
HDAC6-206ENST00000426196 ADD2P35612 726 aa16.99■□□□□ 0.31
HDAC6-206ENST00000426196 CNTN2Q02246 1040 aa16.99■□□□□ 0.31
HDAC6-206ENST00000426196 ZKSCAN2Q63HK3 967 aa16.99■□□□□ 0.31
HDAC6-206ENST00000426196 FAM133AQ8N9E0 248 aa16.99■□□□□ 0.31
HDAC6-206ENST00000426196 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.99■□□□□ 0.31
HDAC6-206ENST00000426196 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.99■□□□□ 0.316e-8■■■■□ 24.3
HDAC6-206ENST00000426196 ACAD9Q9H845 621 aa16.99■□□□□ 0.31
HDAC6-206ENST00000426196 IL1RAPL2Q9NP60 686 aa16.99■□□□□ 0.31
HDAC6-206ENST00000426196 FEM1BQ9UK73 627 aa16.99■□□□□ 0.31
HDAC6-206ENST00000426196 CYP2C9P11712 490 aa16.98■□□□□ 0.31
HDAC6-206ENST00000426196 SMPD1P17405 629 aa16.98■□□□□ 0.31
HDAC6-206ENST00000426196 RFC2P35250 354 aa16.98■□□□□ 0.31
HDAC6-206ENST00000426196 GRB10Q13322 594 aa16.98■□□□□ 0.31
HDAC6-206ENST00000426196 HSP90AB4PQ58FF6 505 aa16.98■□□□□ 0.31
HDAC6-206ENST00000426196 FTSJ3Q8IY81 847 aaKnown RBP16.98■□□□□ 0.31
HDAC6-206ENST00000426196 ARPP21Q9UBL0 812 aaPredicted RBP16.98■□□□□ 0.31
HDAC6-206ENST00000426196 COG6Q9Y2V7 657 aa16.98■□□□□ 0.31
HDAC6-206ENST00000426196 Q9Y3F1 56 aa16.98■□□□□ 0.31
HDAC6-206ENST00000426196 TNKSO95271 1327 aa16.97■□□□□ 0.31
HDAC6-206ENST00000426196 ZBED9Q6R2W3 1325 aa16.97■□□□□ 0.31
HDAC6-206ENST00000426196 TRIP12Q14669 1992 aaPredicted RBP16.97■□□□□ 0.31
HDAC6-206ENST00000426196 FDX1P10109 184 aa16.97■□□□□ 0.31
HDAC6-206ENST00000426196 MRE11P49959 708 aa16.97■□□□□ 0.31
HDAC6-206ENST00000426196 IQSEC1Q6DN90 963 aa16.97■□□□□ 0.31
HDAC6-206ENST00000426196 CTR9Q6PD62 1173 aa16.97■□□□□ 0.31
HDAC6-206ENST00000426196 HERC6Q8IVU3 1022 aa16.97■□□□□ 0.31
HDAC6-206ENST00000426196 ITPRIPQ8IWB1 547 aa16.97■□□□□ 0.31
HDAC6-206ENST00000426196 MKNK2Q9HBH9 465 aa16.97■□□□□ 0.31
HDAC6-206ENST00000426196 TRMT13Q9NUP7 481 aaKnown RBP16.97■□□□□ 0.31
HDAC6-206ENST00000426196 PAG1Q9NWQ8 432 aa16.97■□□□□ 0.31
HDAC6-206ENST00000426196 SLC4A4Q9Y6R1 1079 aa16.97■□□□□ 0.31
HDAC6-206ENST00000426196 SCN10AQ9Y5Y9 1956 aa16.97■□□□□ 0.31
HDAC6-206ENST00000426196 ARHGEF15O94989 841 aa16.96■□□□□ 0.31
HDAC6-206ENST00000426196 PTGS1P23219 599 aa16.96■□□□□ 0.31
HDAC6-206ENST00000426196 SLFNL1Q499Z3 407 aa16.96■□□□□ 0.31
HDAC6-206ENST00000426196 CEP85Q6P2H3 762 aa16.96■□□□□ 0.31
HDAC6-206ENST00000426196 CLASRPQ8N2M8 674 aaKnown RBP16.96■□□□□ 0.31
HDAC6-206ENST00000426196 UIMC1Q96RL1 719 aa16.96■□□□□ 0.31
HDAC6-206ENST00000426196 FTOQ9C0B1 505 aaKnown RBP eCLIP16.96■□□□□ 0.31
HDAC6-206ENST00000426196 CD320Q9NPF0 282 aa16.96■□□□□ 0.31
HDAC6-206ENST00000426196 A1CFQ9NQ94 594 aaKnown RBP16.96■□□□□ 0.31
HDAC6-206ENST00000426196 RNF146Q9NTX7 359 aa16.96■□□□□ 0.31
HDAC6-206ENST00000426196 POLR3EQ9NVU0 708 aa16.96■□□□□ 0.31
HDAC6-206ENST00000426196 LMCD1Q9NZU5 365 aa16.96■□□□□ 0.31
HDAC6-206ENST00000426196 CLIP2Q9UDT6 1046 aa16.96■□□□□ 0.31
HDAC6-206ENST00000426196 PTPRSQ13332 1948 aa16.96■□□□□ 0.3
HDAC6-206ENST00000426196 SOWAHBA6NEL2 793 aa16.95■□□□□ 0.3
HDAC6-206ENST00000426196 IFIT2P09913 472 aaKnown RBP16.95■□□□□ 0.3
HDAC6-206ENST00000426196 RASA1P20936 1047 aa16.95■□□□□ 0.3
HDAC6-206ENST00000426196 CSPP1Q1MSJ5 1256 aa16.95■□□□□ 0.3
HDAC6-206ENST00000426196 FBXO16Q8IX29 292 aaPredicted RBP16.95■□□□□ 0.3
HDAC6-206ENST00000426196 GJD3Q8N144 294 aa16.95■□□□□ 0.3
HDAC6-206ENST00000426196 RETREG2Q8NC44 543 aa16.95■□□□□ 0.3
HDAC6-206ENST00000426196 RHPN1Q8TCX5 695 aa16.95■□□□□ 0.3
HDAC6-206ENST00000426196 PDGFCQ9NRA1 345 aa16.95■□□□□ 0.3
HDAC6-206ENST00000426196 ISY1Q9ULR0 285 aaKnown RBP16.95■□□□□ 0.3
HDAC6-206ENST00000426196 LPXNO60711 386 aa16.94■□□□□ 0.3
HDAC6-206ENST00000426196 SSTR3P32745 418 aaPredicted RBP16.94■□□□□ 0.3
HDAC6-206ENST00000426196 KCNJ6P48051 423 aa16.94■□□□□ 0.3
HDAC6-206ENST00000426196 TKFCQ3LXA3 575 aa16.94■□□□□ 0.3
HDAC6-206ENST00000426196 FAM47CQ5HY64 1035 aa16.94■□□□□ 0.3
HDAC6-206ENST00000426196 EEPD1Q7L9B9 569 aa16.94■□□□□ 0.3
HDAC6-206ENST00000426196 UBE2ZQ9H832 354 aaPredicted RBP16.94■□□□□ 0.3
HDAC6-206ENST00000426196 VTA1Q9NP79 307 aa16.94■□□□□ 0.3
HDAC6-206ENST00000426196 TRIOO75962 3097 aa16.93■□□□□ 0.3
HDAC6-206ENST00000426196 PITPNM1O00562 1244 aa16.93■□□□□ 0.3
HDAC6-206ENST00000426196 BAIAP3O94812 1187 aa16.93■□□□□ 0.3
HDAC6-206ENST00000426196 ALADP13716 330 aa16.93■□□□□ 0.3
HDAC6-206ENST00000426196 CPT1AP50416 773 aa16.93■□□□□ 0.3
HDAC6-206ENST00000426196 UBE3CQ15386 1083 aa16.93■□□□□ 0.3
HDAC6-206ENST00000426196 TAPT1Q6NXT6 567 aa16.93■□□□□ 0.3
HDAC6-206ENST00000426196 KIAA1211Q6ZU35 1233 aa16.93■□□□□ 0.3
HDAC6-206ENST00000426196 RPAP2Q8IXW5 612 aaPredicted RBP16.93■□□□□ 0.3
HDAC6-206ENST00000426196 STK11IPQ8N1F8 1099 aa16.93■□□□□ 0.3
HDAC6-206ENST00000426196 GDPD5Q8WTR4 605 aa16.93■□□□□ 0.3
HDAC6-206ENST00000426196 GPHNQ9NQX3 736 aaPredicted RBP16.93■□□□□ 0.3
HDAC6-206ENST00000426196 SYNPO2Q9UMS6 1093 aa16.93■□□□□ 0.3
HDAC6-206ENST00000426196 LCTP09848 1927 aa16.93■□□□□ 0.3
HDAC6-206ENST00000426196 SIP14410 1827 aa16.93■□□□□ 0.3
HDAC6-206ENST00000426196 MYL3P08590 195 aa16.92■□□□□ 0.3
HDAC6-206ENST00000426196 BMP3P12645 472 aa16.92■□□□□ 0.3
HDAC6-206ENST00000426196 STAT2P52630 851 aa16.92■□□□□ 0.3
HDAC6-206ENST00000426196 PURAQ00577 322 aaKnown RBP16.92■□□□□ 0.3
HDAC6-206ENST00000426196 IKQ13123 557 aaPredicted RBP16.92■□□□□ 0.3
HDAC6-206ENST00000426196 BFSP2Q13515 415 aa16.92■□□□□ 0.3
HDAC6-206ENST00000426196 FAM178BQ8IXR5 827 aa16.92■□□□□ 0.3
HDAC6-206ENST00000426196 LRRC47Q8N1G4 583 aaKnown RBP16.92■□□□□ 0.3
HDAC6-206ENST00000426196 GMCL1P1Q8NEA9 526 aa16.92■□□□□ 0.3
HDAC6-206ENST00000426196 MKL1Q969V6 931 aa16.92■□□□□ 0.3
HDAC6-206ENST00000426196 KIF1BPQ96EK5 621 aa16.92■□□□□ 0.3
HDAC6-206ENST00000426196 TRERF1Q96PN7 1200 aa16.92■□□□□ 0.3
HDAC6-206ENST00000426196 MTG1Q9BT17 334 aaPredicted RBP16.92■□□□□ 0.3
HDAC6-206ENST00000426196 BCL11AQ9H165 835 aa16.92■□□□□ 0.3
HDAC6-206ENST00000426196 BOLA2Q9H3K6 86 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms