RNA–Protein interactions for RNA: ENST00000425942.3

TPM3P4-201, Transcript of tropomyosin 3 pseudogene 4, humanhuman

BASIC

Gene TPM3P4, Length 755 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P4-201ENST00000425942 UPF2Q9HAU5 1272 aaKnown RBP10.47□□□□□ -0.73
TPM3P4-201ENST00000425942 INCENPQ9NQS7 918 aa10.47□□□□□ -0.73
TPM3P4-201ENST00000425942 ADAMTS5Q9UNA0 930 aa10.47□□□□□ -0.73
TPM3P4-201ENST00000425942 LCTP09848 1927 aa10.46□□□□□ -0.73
TPM3P4-201ENST00000425942 SH2B2O14492 632 aaPredicted RBP10.46□□□□□ -0.73
TPM3P4-201ENST00000425942 RAD21O60216 631 aa10.46□□□□□ -0.73
TPM3P4-201ENST00000425942 SLC25A27O95847 323 aa10.46□□□□□ -0.73
TPM3P4-201ENST00000425942 ANTXR2P58335 489 aa10.46□□□□□ -0.73
TPM3P4-201ENST00000425942 ZNF543Q08ER8 600 aa10.46□□□□□ -0.73
TPM3P4-201ENST00000425942 CCDC96Q2M329 555 aa10.46□□□□□ -0.73
TPM3P4-201ENST00000425942 KIAA1755Q5JYT7 1200 aa10.46□□□□□ -0.73
TPM3P4-201ENST00000425942 BLOC1S2Q6QNY1 142 aa10.46□□□□□ -0.73
TPM3P4-201ENST00000425942 BTNL9Q6UXG8 535 aa10.46□□□□□ -0.73
TPM3P4-201ENST00000425942 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.46□□□□□ -0.73
TPM3P4-201ENST00000425942 DHX32Q7L7V1 743 aaKnown RBP10.46□□□□□ -0.73
TPM3P4-201ENST00000425942 CTU1Q7Z7A3 348 aaKnown RBP10.46□□□□□ -0.73
TPM3P4-201ENST00000425942 CATIPQ7Z7H3 387 aa10.46□□□□□ -0.73
TPM3P4-201ENST00000425942 ANKRD13CQ8N6S4 541 aa10.46□□□□□ -0.73
TPM3P4-201ENST00000425942 GPRC5AQ8NFJ5 357 aa10.46□□□□□ -0.73
TPM3P4-201ENST00000425942 ZKSCAN3Q9BRR0 538 aa10.46□□□□□ -0.73
TPM3P4-201ENST00000425942 TEX13BQ9BXU2 312 aa10.46□□□□□ -0.73
TPM3P4-201ENST00000425942 LY9Q9HBG7 655 aa10.46□□□□□ -0.73
TPM3P4-201ENST00000425942 SNX14Q9Y5W7 946 aa10.46□□□□□ -0.73
TPM3P4-201ENST00000425942 TAF6LQ9Y6J9 622 aa10.46□□□□□ -0.73
TPM3P4-201ENST00000425942 CCDC69A6NI79 296 aa10.45□□□□□ -0.74
TPM3P4-201ENST00000425942 PARP1P09874 1014 aaKnown RBP10.45□□□□□ -0.74
TPM3P4-201ENST00000425942 HOXD10P28358 340 aa10.45□□□□□ -0.74
TPM3P4-201ENST00000425942 KIF5BP33176 963 aa10.45□□□□□ -0.74
TPM3P4-201ENST00000425942 IKQ13123 557 aaPredicted RBP10.45□□□□□ -0.74
TPM3P4-201ENST00000425942 PPP2R5BQ15173 497 aa10.45□□□□□ -0.74
TPM3P4-201ENST00000425942 PXYLP1Q8TE99 480 aa10.45□□□□□ -0.74
TPM3P4-201ENST00000425942 JAKMIP1Q96N16 626 aaKnown RBP10.45□□□□□ -0.74
TPM3P4-201ENST00000425942 P2RX7Q99572 595 aaKnown RBP10.45□□□□□ -0.74
TPM3P4-201ENST00000425942 PAGR1Q9BTK6 254 aa10.45□□□□□ -0.74
TPM3P4-201ENST00000425942 AGXT2Q9BYV1 514 aa10.45□□□□□ -0.74
TPM3P4-201ENST00000425942 MAF1Q9H063 256 aa10.45□□□□□ -0.74
TPM3P4-201ENST00000425942 SLC38A10Q9HBR0 1119 aa10.45□□□□□ -0.74
TPM3P4-201ENST00000425942 CPA4Q9UI42 421 aa10.45□□□□□ -0.74
TPM3P4-201ENST00000425942 CTDP1Q9Y5B0 961 aaPredicted RBP10.45□□□□□ -0.74
TPM3P4-201ENST00000425942 TMEM232C9JQI7 657 aa10.44□□□□□ -0.74
TPM3P4-201ENST00000425942 VWA5AO00534 786 aa10.44□□□□□ -0.74
TPM3P4-201ENST00000425942 ZBED4O75132 1171 aa10.44□□□□□ -0.74
TPM3P4-201ENST00000425942 CASTP20810 708 aaKnown RBP10.44□□□□□ -0.74
TPM3P4-201ENST00000425942 RPS6KB1P23443 525 aa10.44□□□□□ -0.74
TPM3P4-201ENST00000425942 TROAPQ12815 778 aa10.44□□□□□ -0.74
TPM3P4-201ENST00000425942 TRAF1Q13077 416 aa10.44□□□□□ -0.74
TPM3P4-201ENST00000425942 GRM4Q14833 912 aa10.44□□□□□ -0.74
TPM3P4-201ENST00000425942 TKFCQ3LXA3 575 aa10.44□□□□□ -0.74
TPM3P4-201ENST00000425942 SYDE2Q5VT97 1194 aa10.44□□□□□ -0.74
TPM3P4-201ENST00000425942 CCAR1Q8IX12 1150 aaKnown RBP10.44□□□□□ -0.74
TPM3P4-201ENST00000425942 ZNF654Q8IZM8 581 aa10.44□□□□□ -0.74
TPM3P4-201ENST00000425942 ABRAQ8N0Z2 381 aa10.44□□□□□ -0.74
TPM3P4-201ENST00000425942 REPS2Q8NFH8 660 aa10.44□□□□□ -0.74
TPM3P4-201ENST00000425942 CTCFLQ8NI51 663 aaPredicted RBP10.44□□□□□ -0.74
TPM3P4-201ENST00000425942 CD99L2Q8TCZ2 262 aa10.44□□□□□ -0.74
TPM3P4-201ENST00000425942 IGDCC4Q8TDY8 1250 aa10.44□□□□□ -0.74
TPM3P4-201ENST00000425942 COA7Q96BR5 231 aa10.44□□□□□ -0.74
TPM3P4-201ENST00000425942 ATG4CQ96DT6 458 aa10.44□□□□□ -0.74
TPM3P4-201ENST00000425942 NUP88Q99567 741 aaPredicted RBP10.44□□□□□ -0.74
TPM3P4-201ENST00000425942 SPATC1LQ9H0A9 340 aa10.44□□□□□ -0.74
TPM3P4-201ENST00000425942 RANBP17Q9H2T7 1088 aaKnown RBP10.44□□□□□ -0.74
TPM3P4-201ENST00000425942 R3HDMLQ9H3Y0 253 aa10.44□□□□□ -0.74
TPM3P4-201ENST00000425942 MROH8Q9H579 483 aa10.44□□□□□ -0.74
TPM3P4-201ENST00000425942 EFCC1Q9HA90 598 aa10.44□□□□□ -0.74
TPM3P4-201ENST00000425942 IL21Q9HBE4 155 aa10.44□□□□□ -0.74
TPM3P4-201ENST00000425942 FBXO40Q9UH90 709 aa10.44□□□□□ -0.74
TPM3P4-201ENST00000425942 ZNF214Q9UL59 606 aaPredicted RBP10.44□□□□□ -0.74
TPM3P4-201ENST00000425942 ISY1Q9ULR0 285 aaKnown RBP10.44□□□□□ -0.74
TPM3P4-201ENST00000425942 TNPO2O14787 897 aaKnown RBP10.43□□□□□ -0.74
TPM3P4-201ENST00000425942 CNMDO75829 334 aa10.43□□□□□ -0.74
TPM3P4-201ENST00000425942 RGS20O76081 388 aa10.43□□□□□ -0.74
TPM3P4-201ENST00000425942 OATP04181 439 aa10.43□□□□□ -0.74
TPM3P4-201ENST00000425942 SMARCA1P28370 1054 aa10.43□□□□□ -0.74
TPM3P4-201ENST00000425942 SLC4A3P48751 1232 aa10.43□□□□□ -0.74
TPM3P4-201ENST00000425942 GNAQP50148 359 aa10.43□□□□□ -0.74
TPM3P4-201ENST00000425942 FGD1P98174 961 aa10.43□□□□□ -0.74
TPM3P4-201ENST00000425942 EXOSC10Q01780 885 aaKnown RBP10.43□□□□□ -0.74
TPM3P4-201ENST00000425942 IRF5Q13568 498 aa10.43□□□□□ -0.74
TPM3P4-201ENST00000425942 ADCK5Q3MIX3 580 aa10.43□□□□□ -0.74
TPM3P4-201ENST00000425942 FBXO46Q6PJ61 603 aaPredicted RBP10.43□□□□□ -0.74
TPM3P4-201ENST00000425942 APOA5Q6Q788 366 aa10.43□□□□□ -0.74
TPM3P4-201ENST00000425942 SYNE3Q6ZMZ3 975 aa10.43□□□□□ -0.74
TPM3P4-201ENST00000425942 NFXL1Q6ZNB6 911 aa10.43□□□□□ -0.74
TPM3P4-201ENST00000425942 KCTD1Q719H9 257 aa10.43□□□□□ -0.74
TPM3P4-201ENST00000425942 RUFY3Q7L099 469 aa10.43□□□□□ -0.74
TPM3P4-201ENST00000425942 OTOP1Q7RTM1 612 aa10.43□□□□□ -0.74
TPM3P4-201ENST00000425942 METTL3Q86U44 580 aaKnown RBP10.43□□□□□ -0.74
TPM3P4-201ENST00000425942 RIOX2Q8IUF8 465 aa10.43□□□□□ -0.74
TPM3P4-201ENST00000425942 GPIHBP1Q8IV16 184 aa10.43□□□□□ -0.74
TPM3P4-201ENST00000425942 TRMT44Q8IYL2 757 aaKnown RBP10.43□□□□□ -0.74
TPM3P4-201ENST00000425942 NKX2-3Q8TAU0 364 aa10.43□□□□□ -0.74
TPM3P4-201ENST00000425942 ZNF516Q92618 1163 aa10.43□□□□□ -0.74
TPM3P4-201ENST00000425942 LZTS2Q9BRK4 669 aa10.43□□□□□ -0.74
TPM3P4-201ENST00000425942 CWC22Q9HCG8 908 aaKnown RBP10.43□□□□□ -0.74
TPM3P4-201ENST00000425942 TXNRD2Q9NNW7 524 aa10.43□□□□□ -0.74
TPM3P4-201ENST00000425942 FBXO28Q9NVF7 368 aa10.43□□□□□ -0.74
TPM3P4-201ENST00000425942 RBM28Q9NW13 759 aaKnown RBP10.43□□□□□ -0.74
TPM3P4-201ENST00000425942 RBPJLQ9UBG7 517 aa10.43□□□□□ -0.74
TPM3P4-201ENST00000425942 SLC12A7Q9Y666 1083 aa10.43□□□□□ -0.74
TPM3P4-201ENST00000425942 CYP46A1Q9Y6A2 500 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms