RNA–Protein interactions for RNA: ENST00000422863.1

HLA-DQA1-204, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-204ENST00000422863 ALDH1L2Q3SY69 923 aa9.1□□□□□ -0.95
HLA-DQA1-204ENST00000422863 TNNI3KQ59H18 835 aa9.1□□□□□ -0.95
HLA-DQA1-204ENST00000422863 RIOX2Q8IUF8 465 aa9.1□□□□□ -0.95
HLA-DQA1-204ENST00000422863 ARNTL2Q8WYA1 636 aa9.1□□□□□ -0.95
HLA-DQA1-204ENST00000422863 MTIF3Q9H2K0 278 aaKnown RBP9.1□□□□□ -0.95
HLA-DQA1-204ENST00000422863 HIPK3Q9H422 1215 aa9.1□□□□□ -0.95
HLA-DQA1-204ENST00000422863 ANTXR1Q9H6X2 564 aa9.1□□□□□ -0.95
HLA-DQA1-204ENST00000422863 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.1□□□□□ -0.95
HLA-DQA1-204ENST00000422863 SEPT9Q9UHD8 586 aaPredicted RBP9.1□□□□□ -0.95
HLA-DQA1-204ENST00000422863 DIS3Q9Y2L1 958 aaKnown RBP9.1□□□□□ -0.95
HLA-DQA1-204ENST00000422863 FPGT-TNNI3KV9GXZ4 949 aa9.1□□□□□ -0.95
HLA-DQA1-204ENST00000422863 LOC100996750A0A140TA64 210 aa9.09□□□□□ -0.95
HLA-DQA1-204ENST00000422863 PI4K2BG5E9Z4 385 aa9.09□□□□□ -0.95
HLA-DQA1-204ENST00000422863 RBAK-RBAKDNI3L0D1 243 aa9.09□□□□□ -0.95
HLA-DQA1-204ENST00000422863 ARHGEF15O94989 841 aa9.09□□□□□ -0.95
HLA-DQA1-204ENST00000422863 AKR1B1P15121 316 aa9.09□□□□□ -0.95
HLA-DQA1-204ENST00000422863 GABPAQ06546 454 aa9.09□□□□□ -0.95
HLA-DQA1-204ENST00000422863 OS9Q13438 667 aaPredicted RBP9.09□□□□□ -0.95
HLA-DQA1-204ENST00000422863 ACVR2BQ13705 512 aa9.09□□□□□ -0.95
HLA-DQA1-204ENST00000422863 CCDC144BQ3MJ40 725 aa9.09□□□□□ -0.95
HLA-DQA1-204ENST00000422863 TREML4Q6UXN2 200 aa9.09□□□□□ -0.95
HLA-DQA1-204ENST00000422863 SPRED2Q7Z698 418 aa9.09□□□□□ -0.95
HLA-DQA1-204ENST00000422863 PCSK9Q8NBP7 692 aaKnown RBP9.09□□□□□ -0.95
HLA-DQA1-204ENST00000422863 HLA-CQ95604 372 aa9.09□□□□□ -0.95
HLA-DQA1-204ENST00000422863 DDX11Q96FC9 970 aa9.09□□□□□ -0.95
HLA-DQA1-204ENST00000422863 SNX27Q96L92 541 aa9.09□□□□□ -0.95
HLA-DQA1-204ENST00000422863 KRTAP4-6Q9BYQ5 205 aa9.09□□□□□ -0.95
HLA-DQA1-204ENST00000422863 TRPV6Q9H1D0 765 aa9.09□□□□□ -0.95
HLA-DQA1-204ENST00000422863 VCPKMTQ9H867 229 aa9.09□□□□□ -0.95
HLA-DQA1-204ENST00000422863 MCM9Q9NXL9 1143 aa9.09□□□□□ -0.95
HLA-DQA1-204ENST00000422863 TLR7Q9NYK1 1049 aaKnown RBP9.09□□□□□ -0.95
HLA-DQA1-204ENST00000422863 TNNQ9UQP3 1299 aa9.09□□□□□ -0.95
HLA-DQA1-204ENST00000422863 RIPK3Q9Y572 518 aa9.09□□□□□ -0.95
HLA-DQA1-204ENST00000422863 PCDHA11Q9Y5I1 949 aa9.09□□□□□ -0.95
HLA-DQA1-204ENST00000422863 MYH7P12883 1935 aa9.08□□□□□ -0.96
HLA-DQA1-204ENST00000422863 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.08□□□□□ -0.96
HLA-DQA1-204ENST00000422863 VWA5AO00534 786 aa9.08□□□□□ -0.96
HLA-DQA1-204ENST00000422863 GNAI3P08754 354 aa9.08□□□□□ -0.96
HLA-DQA1-204ENST00000422863 ATP2A2P16615 1042 aaKnown RBP9.08□□□□□ -0.96
HLA-DQA1-204ENST00000422863 GJA9P57773 515 aa9.08□□□□□ -0.96
HLA-DQA1-204ENST00000422863 ICA1Q05084 483 aa9.08□□□□□ -0.96
HLA-DQA1-204ENST00000422863 SLFN5Q08AF3 891 aa9.08□□□□□ -0.96
HLA-DQA1-204ENST00000422863 MTX1Q13505 466 aa9.08□□□□□ -0.96
HLA-DQA1-204ENST00000422863 TTLL4Q14679 1199 aa9.08□□□□□ -0.96
HLA-DQA1-204ENST00000422863 TMEM67Q5HYA8 995 aa9.08□□□□□ -0.96
HLA-DQA1-204ENST00000422863 CXCL17Q6UXB2 119 aa9.08□□□□□ -0.96
HLA-DQA1-204ENST00000422863 NOL8Q76FK4 1167 aaKnown RBP9.08□□□□□ -0.96
HLA-DQA1-204ENST00000422863 DEFB128Q7Z7B8 93 aa9.08□□□□□ -0.96
HLA-DQA1-204ENST00000422863 SDR42E1Q8WUS8 393 aa9.08□□□□□ -0.96
HLA-DQA1-204ENST00000422863 VWCEQ96DN2 955 aa9.08□□□□□ -0.96
HLA-DQA1-204ENST00000422863 API5Q9BZZ5 524 aaKnown RBP9.08□□□□□ -0.96
HLA-DQA1-204ENST00000422863 WNT8AQ9H1J5 351 aa9.08□□□□□ -0.96
HLA-DQA1-204ENST00000422863 SPC25Q9HBM1 224 aa9.08□□□□□ -0.96
HLA-DQA1-204ENST00000422863 ARHGEF10LQ9HCE6 1279 aa9.08□□□□□ -0.96
HLA-DQA1-204ENST00000422863 ADAMTS5Q9UNA0 930 aa9.08□□□□□ -0.96
HLA-DQA1-204ENST00000422863 COG5Q9UP83 839 aa9.08□□□□□ -0.96
HLA-DQA1-204ENST00000422863 TMX2Q9Y320 296 aa9.08□□□□□ -0.96
HLA-DQA1-204ENST00000422863 GRIN2DO15399 1336 aa9.07□□□□□ -0.96
HLA-DQA1-204ENST00000422863 MAGEB6P1A0A0J9YX57 407 aa9.07□□□□□ -0.96
HLA-DQA1-204ENST00000422863 E9PSI1 815 aa9.07□□□□□ -0.96
HLA-DQA1-204ENST00000422863 WDR46O15213 610 aaKnown RBP9.07□□□□□ -0.96
HLA-DQA1-204ENST00000422863 CTAGE5O15320 804 aa9.07□□□□□ -0.96
HLA-DQA1-204ENST00000422863 B4GALT4O60513 344 aa9.07□□□□□ -0.96
HLA-DQA1-204ENST00000422863 EEF2P13639 858 aaKnown RBP9.07□□□□□ -0.96
HLA-DQA1-204ENST00000422863 CST5P28325 142 aaPredicted RBP9.07□□□□□ -0.96
HLA-DQA1-204ENST00000422863 PSMC6P62333 389 aa9.07□□□□□ -0.96
HLA-DQA1-204ENST00000422863 PPP1R15BQ5SWA1 713 aa9.07□□□□□ -0.96
HLA-DQA1-204ENST00000422863 FAM83BQ5T0W9 1011 aa9.07□□□□□ -0.96
HLA-DQA1-204ENST00000422863 SNRNP48Q6IEG0 339 aaKnown RBP9.07□□□□□ -0.96
HLA-DQA1-204ENST00000422863 TMEM179Q6ZVK1 233 aa9.07□□□□□ -0.96
HLA-DQA1-204ENST00000422863 RPUSD2Q8IZ73 545 aaKnown RBP9.07□□□□□ -0.96
HLA-DQA1-204ENST00000422863 CPXCR1Q8N123 301 aa9.07□□□□□ -0.96
HLA-DQA1-204ENST00000422863 REPS2Q8NFH8 660 aa9.07□□□□□ -0.96
HLA-DQA1-204ENST00000422863 PPP1R13LQ8WUF5 828 aa9.07□□□□□ -0.96
HLA-DQA1-204ENST00000422863 ANKS1AQ92625 1134 aa9.07□□□□□ -0.96
HLA-DQA1-204ENST00000422863 NUP88Q99567 741 aaPredicted RBP9.07□□□□□ -0.96
HLA-DQA1-204ENST00000422863 NOC4LQ9BVI4 516 aaKnown RBP9.07□□□□□ -0.96
HLA-DQA1-204ENST00000422863 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.07□□□□□ -0.96
HLA-DQA1-204ENST00000422863 ZNF214Q9UL59 606 aaPredicted RBP9.07□□□□□ -0.96
HLA-DQA1-204ENST00000422863 PCDHGA10Q9Y5H3 936 aa9.07□□□□□ -0.96
HLA-DQA1-204ENST00000422863 DDX49Q9Y6V7 483 aaKnown RBP9.07□□□□□ -0.96
HLA-DQA1-204ENST00000422863 ROBO3Q96MS0 1386 aa9.07□□□□□ -0.96
HLA-DQA1-204ENST00000422863 SIP14410 1827 aa9.07□□□□□ -0.96
HLA-DQA1-204ENST00000422863 ASTN1O14525 1302 aa9.06□□□□□ -0.96
HLA-DQA1-204ENST00000422863 LCTP09848 1927 aa9.06□□□□□ -0.96
HLA-DQA1-204ENST00000422863 CYP2D7A0A087X1C5 515 aa9.06□□□□□ -0.96
HLA-DQA1-204ENST00000422863 BCAR3O75815 825 aa9.06□□□□□ -0.96
HLA-DQA1-204ENST00000422863 GNAI2P04899 355 aa9.06□□□□□ -0.96
HLA-DQA1-204ENST00000422863 POU3F3P20264 500 aaPredicted RBP9.06□□□□□ -0.96
HLA-DQA1-204ENST00000422863 NHLH1Q02575 133 aa9.06□□□□□ -0.96
HLA-DQA1-204ENST00000422863 TAP1Q03518 808 aa9.06□□□□□ -0.96
HLA-DQA1-204ENST00000422863 GRB10Q13322 594 aa9.06□□□□□ -0.96
HLA-DQA1-204ENST00000422863 ITGA7Q13683 1181 aa9.06□□□□□ -0.96
HLA-DQA1-204ENST00000422863 TMEM63BQ5T3F8 832 aa9.06□□□□□ -0.96
HLA-DQA1-204ENST00000422863 MAMDC4Q6UXC1 1216 aa9.06□□□□□ -0.96
HLA-DQA1-204ENST00000422863 FBXL18Q96ME1 805 aa9.06□□□□□ -0.96
HLA-DQA1-204ENST00000422863 RIOK1Q9BRS2 568 aaKnown RBP9.06□□□□□ -0.96
HLA-DQA1-204ENST00000422863 UPF3AQ9H1J1 476 aaKnown RBP9.06□□□□□ -0.96
HLA-DQA1-204ENST00000422863 DBNLQ9UJU6 430 aaKnown RBP9.06□□□□□ -0.96
HLA-DQA1-204ENST00000422863 PPP1R9AQ9ULJ8 1098 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms