RNA–Protein interactions for RNA: ENST00000422468.1

TRIM43CP-201, Transcript of tripartite motif containing 43C, pseudogene, humanhuman

BASIC

Gene TRIM43CP, Length 1,028 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43CP-201ENST00000422468 CNPY2Q9Y2B0 182 aa9.67□□□□□ -0.86
TRIM43CP-201ENST00000422468 LTBP2Q14767 1821 aa9.67□□□□□ -0.86
TRIM43CP-201ENST00000422468 NEDD4P46934 1319 aa9.66□□□□□ -0.86
TRIM43CP-201ENST00000422468 ZNF865P0CJ78 1059 aaPredicted RBP9.66□□□□□ -0.86
TRIM43CP-201ENST00000422468 PCP11498 1178 aaKnown RBP9.66□□□□□ -0.86
TRIM43CP-201ENST00000422468 AKR1A1P14550 325 aa9.66□□□□□ -0.86
TRIM43CP-201ENST00000422468 CHMLP26374 656 aa9.66□□□□□ -0.86
TRIM43CP-201ENST00000422468 ADCYAP1R1P41586 468 aa9.66□□□□□ -0.86
TRIM43CP-201ENST00000422468 IRX5P78411 483 aaPredicted RBP9.66□□□□□ -0.86
TRIM43CP-201ENST00000422468 CWC27Q6UX04 472 aaKnown RBP9.66□□□□□ -0.86
TRIM43CP-201ENST00000422468 MAMDC4Q6UXC1 1216 aa9.66□□□□□ -0.86
TRIM43CP-201ENST00000422468 SLC39A5Q6ZMH5 540 aa9.66□□□□□ -0.86
TRIM43CP-201ENST00000422468 STOX1Q6ZVD7 989 aa9.66□□□□□ -0.86
TRIM43CP-201ENST00000422468 RNF180Q86T96 592 aa9.66□□□□□ -0.86
TRIM43CP-201ENST00000422468 ANKRD35Q8N283 1001 aa9.66□□□□□ -0.86
TRIM43CP-201ENST00000422468 TMC2Q8TDI7 906 aa9.66□□□□□ -0.86
TRIM43CP-201ENST00000422468 DCAF4Q8WV16 495 aa9.66□□□□□ -0.86
TRIM43CP-201ENST00000422468 CHMP4CQ96CF2 233 aa9.66□□□□□ -0.86
TRIM43CP-201ENST00000422468 TOMM22Q9NS69 142 aa9.66□□□□□ -0.86
TRIM43CP-201ENST00000422468 HOMER2Q9NSB8 354 aa9.66□□□□□ -0.86
TRIM43CP-201ENST00000422468 TCP11L1Q9NUJ3 509 aa9.66□□□□□ -0.86
TRIM43CP-201ENST00000422468 ZNF536O15090 1300 aa9.65□□□□□ -0.86
TRIM43CP-201ENST00000422468 HIP1O00291 1037 aa9.65□□□□□ -0.86
TRIM43CP-201ENST00000422468 SNAI1O95863 264 aaPredicted RBP9.65□□□□□ -0.86
TRIM43CP-201ENST00000422468 TOP1P11387 765 aaKnown RBP9.65□□□□□ -0.86
TRIM43CP-201ENST00000422468 RTP1P59025 263 aa9.65□□□□□ -0.86
TRIM43CP-201ENST00000422468 HAND2P61296 217 aa9.65□□□□□ -0.86
TRIM43CP-201ENST00000422468 SNX17Q15036 470 aa9.65□□□□□ -0.86
TRIM43CP-201ENST00000422468 TKFCQ3LXA3 575 aa9.65□□□□□ -0.86
TRIM43CP-201ENST00000422468 RRP12Q5JTH9 1297 aaKnown RBP9.65□□□□□ -0.86
TRIM43CP-201ENST00000422468 AKNAD1Q5T1N1 836 aa9.65□□□□□ -0.86
TRIM43CP-201ENST00000422468 C1orf53Q5VUE5 145 aa9.65□□□□□ -0.86
TRIM43CP-201ENST00000422468 KCTD1Q719H9 257 aa9.65□□□□□ -0.86
TRIM43CP-201ENST00000422468 PDCD7Q8N8D1 485 aaKnown RBP9.65□□□□□ -0.86
TRIM43CP-201ENST00000422468 AGBL1Q96MI9 1066 aa9.65□□□□□ -0.86
TRIM43CP-201ENST00000422468 TMEM47Q9BQJ4 181 aa9.65□□□□□ -0.86
TRIM43CP-201ENST00000422468 UBE2OQ9C0C9 1292 aaKnown RBP9.65□□□□□ -0.86
TRIM43CP-201ENST00000422468 ACAD9Q9H845 621 aa9.65□□□□□ -0.86
TRIM43CP-201ENST00000422468 DIAPH3Q9NSV4 1193 aa9.65□□□□□ -0.86
TRIM43CP-201ENST00000422468 RNF146Q9NTX7 359 aa9.65□□□□□ -0.86
TRIM43CP-201ENST00000422468 FAM184BQ9ULE4 1060 aa9.65□□□□□ -0.86
TRIM43CP-201ENST00000422468 PRR12Q9ULL5 1215 aa9.65□□□□□ -0.86
TRIM43CP-201ENST00000422468 PHF24Q9UPV7 400 aa9.65□□□□□ -0.86
TRIM43CP-201ENST00000422468 ATP11BQ9Y2G3 1177 aa9.65□□□□□ -0.86
TRIM43CP-201ENST00000422468 BOLA1Q9Y3E2 137 aa9.65□□□□□ -0.86
TRIM43CP-201ENST00000422468 SOX1O00570 391 aaPredicted RBP9.64□□□□□ -0.87
TRIM43CP-201ENST00000422468 PGK1P00558 417 aa9.64□□□□□ -0.87
TRIM43CP-201ENST00000422468 MDM2Q00987 491 aaPredicted RBP9.64□□□□□ -0.87
TRIM43CP-201ENST00000422468 ACVR2BQ13705 512 aa9.64□□□□□ -0.87
TRIM43CP-201ENST00000422468 CCDC96Q2M329 555 aa9.64□□□□□ -0.87
TRIM43CP-201ENST00000422468 LRIT3Q3SXY7 679 aa9.64□□□□□ -0.87
TRIM43CP-201ENST00000422468 CCDC174Q6PII3 467 aa9.64□□□□□ -0.87
TRIM43CP-201ENST00000422468 MFSD6Q6ZSS7 791 aa9.64□□□□□ -0.87
TRIM43CP-201ENST00000422468 TDHQ8IZJ6 230 aa9.64□□□□□ -0.87
TRIM43CP-201ENST00000422468 FERMT2Q96AC1 680 aa9.64□□□□□ -0.87
TRIM43CP-201ENST00000422468 FGD4Q96M96 766 aa9.64□□□□□ -0.87
TRIM43CP-201ENST00000422468 TTC14Q96N46 770 aa9.64□□□□□ -0.87
TRIM43CP-201ENST00000422468 TRERF1Q96PN7 1200 aa9.64□□□□□ -0.87
TRIM43CP-201ENST00000422468 LBHD1Q9BQE6 289 aaPredicted RBP9.64□□□□□ -0.87
TRIM43CP-201ENST00000422468 RNF41Q9H4P4 317 aaPredicted RBP9.64□□□□□ -0.87
TRIM43CP-201ENST00000422468 SENP2Q9HC62 589 aa9.64□□□□□ -0.87
TRIM43CP-201ENST00000422468 A1CFQ9NQ94 594 aaKnown RBP9.64□□□□□ -0.87
TRIM43CP-201ENST00000422468 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.64□□□□□ -0.87
TRIM43CP-201ENST00000422468 PRKAG2Q9UGJ0 569 aa9.64□□□□□ -0.87
TRIM43CP-201ENST00000422468 ZHX1Q9UKY1 873 aaPredicted RBP9.64□□□□□ -0.87
TRIM43CP-201ENST00000422468 MTMR7Q9Y216 660 aa9.64□□□□□ -0.87
TRIM43CP-201ENST00000422468 LRRC37A2A6NM11 1700 aa9.64□□□□□ -0.87
TRIM43CP-201ENST00000422468 SYNRGQ9UMZ2 1314 aa9.63□□□□□ -0.87
TRIM43CP-201ENST00000422468 POTEB2H3BUK9 544 aa9.63□□□□□ -0.87
TRIM43CP-201ENST00000422468 ZNF213O14771 459 aa9.63□□□□□ -0.87
TRIM43CP-201ENST00000422468 ADAMTS4O75173 837 aa9.63□□□□□ -0.87
TRIM43CP-201ENST00000422468 DUSP11O75319 330 aaKnown RBP9.63□□□□□ -0.87
TRIM43CP-201ENST00000422468 ICAM1P05362 532 aa9.63□□□□□ -0.87
TRIM43CP-201ENST00000422468 ALAS1P13196 640 aa9.63□□□□□ -0.87
TRIM43CP-201ENST00000422468 NT5C2P49902 561 aa9.63□□□□□ -0.87
TRIM43CP-201ENST00000422468 SNAP25P60880 206 aa9.63□□□□□ -0.87
TRIM43CP-201ENST00000422468 CNTN2Q02246 1040 aa9.63□□□□□ -0.87
TRIM43CP-201ENST00000422468 SLC35G1Q2M3R5 365 aa9.63□□□□□ -0.87
TRIM43CP-201ENST00000422468 TRIM60Q495X7 471 aa9.63□□□□□ -0.87
TRIM43CP-201ENST00000422468 BTNL9Q6UXG8 535 aa9.63□□□□□ -0.87
TRIM43CP-201ENST00000422468 CENPQQ7L2Z9 268 aaPredicted RBP9.63□□□□□ -0.87
TRIM43CP-201ENST00000422468 ARMCX2Q7L311 632 aa9.63□□□□□ -0.87
TRIM43CP-201ENST00000422468 CCDC144CPQ8IYA2 1237 aa9.63□□□□□ -0.87
TRIM43CP-201ENST00000422468 FAM133AQ8N9E0 248 aa9.63□□□□□ -0.87
TRIM43CP-201ENST00000422468 SLC39A7Q92504 469 aa9.63□□□□□ -0.87
TRIM43CP-201ENST00000422468 ESR2Q92731 530 aa9.63□□□□□ -0.87
TRIM43CP-201ENST00000422468 LENG1Q96BZ8 264 aaPredicted RBP9.63□□□□□ -0.87
TRIM43CP-201ENST00000422468 LRCH3Q96II8 777 aa9.63□□□□□ -0.87
TRIM43CP-201ENST00000422468 TSEN34Q9BSV6 310 aaKnown RBP9.63□□□□□ -0.87
TRIM43CP-201ENST00000422468 RANBP17Q9H2T7 1088 aaKnown RBP9.63□□□□□ -0.87
TRIM43CP-201ENST00000422468 ABHD16BQ9H3Z7 469 aa9.63□□□□□ -0.87
TRIM43CP-201ENST00000422468 COL6A3P12111 3177 aa9.63□□□□□ -0.87
TRIM43CP-201ENST00000422468 MYH6P13533 1939 aa9.62□□□□□ -0.87
TRIM43CP-201ENST00000422468 A0A1W2PQ45 241 aaPredicted RBP9.62□□□□□ -0.87
TRIM43CP-201ENST00000422468 A0A1W2PQY0 241 aa9.62□□□□□ -0.87
TRIM43CP-201ENST00000422468 SOWAHBA6NEL2 793 aa9.62□□□□□ -0.87
TRIM43CP-201ENST00000422468 TULP1O00294 542 aaPredicted RBP9.62□□□□□ -0.87
TRIM43CP-201ENST00000422468 SGSM2O43147 1006 aa9.62□□□□□ -0.87
TRIM43CP-201ENST00000422468 SLC16A2P36021 539 aa9.62□□□□□ -0.87
TRIM43CP-201ENST00000422468 ACLYP53396 1101 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms