RNA–Protein interactions for RNA: ENST00000422202.5

COL20A1-203, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL20A1, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-203ENST00000422202 TUBB2AQ13885 445 aa14.8□□□□□ -0.04
COL20A1-203ENST00000422202 CERKLQ49MI3 558 aaPredicted RBP14.8□□□□□ -0.04
COL20A1-203ENST00000422202 PARP10Q53GL7 1025 aa14.8□□□□□ -0.04
COL20A1-203ENST00000422202 LRRC47Q8N1G4 583 aaKnown RBP14.8□□□□□ -0.04
COL20A1-203ENST00000422202 PPM1KQ8N3J5 372 aa14.8□□□□□ -0.04
COL20A1-203ENST00000422202 DNAAF3Q8N9W5 541 aa14.8□□□□□ -0.04
COL20A1-203ENST00000422202 TUBB2BQ9BVA1 445 aa14.8□□□□□ -0.04
COL20A1-203ENST00000422202 H3BRJ5 948 aa14.8□□□□□ -0.04
COL20A1-203ENST00000422202 EEF1GP26641 437 aaKnown RBP14.8□□□□□ -0.04
COL20A1-203ENST00000422202 PMLP29590 882 aa14.8□□□□□ -0.04
COL20A1-203ENST00000422202 ARHGAP25P42331 645 aa14.8□□□□□ -0.04
COL20A1-203ENST00000422202 ASPHQ12797 758 aa14.8□□□□□ -0.04
COL20A1-203ENST00000422202 TRIM59Q8IWR1 403 aa14.8□□□□□ -0.04
COL20A1-203ENST00000422202 SLFN12Q8IYM2 578 aa14.8□□□□□ -0.04
COL20A1-203ENST00000422202 CFAP61Q8NHU2 1237 aa14.8□□□□□ -0.04
COL20A1-203ENST00000422202 ZBBXA8MT70 800 aa14.8□□□□□ -0.04
COL20A1-203ENST00000422202 SLC27A2O14975 620 aa14.8□□□□□ -0.04
COL20A1-203ENST00000422202 BLVRAP53004 296 aa14.8□□□□□ -0.04
COL20A1-203ENST00000422202 ARMCX5Q6P1M9 558 aa14.8□□□□□ -0.04
COL20A1-203ENST00000422202 FAM178BQ8IXR5 827 aa14.8□□□□□ -0.04
COL20A1-203ENST00000422202 SPATA5Q8NB90 893 aa14.8□□□□□ -0.04
COL20A1-203ENST00000422202 EEF1B2P24534 225 aaKnown RBP14.8□□□□□ -0.04
COL20A1-203ENST00000422202 SLC9A5Q14940 896 aa14.8□□□□□ -0.04
COL20A1-203ENST00000422202 LZICQ8WZA0 190 aa14.8□□□□□ -0.04
COL20A1-203ENST00000422202 GPC4O75487 556 aa14.8□□□□□ -0.04
COL20A1-203ENST00000422202 EPHB1P54762 984 aa14.8□□□□□ -0.04
COL20A1-203ENST00000422202 TFAP4Q01664 338 aa14.8□□□□□ -0.04
COL20A1-203ENST00000422202 SMC5Q8IY18 1101 aa14.8□□□□□ -0.04
COL20A1-203ENST00000422202 PI4K2BQ8TCG2 481 aa14.8□□□□□ -0.04
COL20A1-203ENST00000422202 MRPL11Q9Y3B7 192 aaKnown RBP14.8□□□□□ -0.04
COL20A1-203ENST00000422202 MFSD14BQ5SR56 506 aa14.79□□□□□ -0.04
COL20A1-203ENST00000422202 FAF1Q9UNN5 650 aaPredicted RBP14.79□□□□□ -0.04
COL20A1-203ENST00000422202 ZNF148Q9UQR1 794 aa14.79□□□□□ -0.04
COL20A1-203ENST00000422202 ANXA13P27216 316 aa14.79□□□□□ -0.04
COL20A1-203ENST00000422202 HDAC1Q13547 482 aaPredicted RBP14.79□□□□□ -0.04
COL20A1-203ENST00000422202 WHAMMP3Q1A5X7 153 aa14.79□□□□□ -0.04
COL20A1-203ENST00000422202 MCF2L2Q86YR7 1114 aa14.79□□□□□ -0.04
COL20A1-203ENST00000422202 RNMTO43148 476 aaKnown RBP14.79□□□□□ -0.04
COL20A1-203ENST00000422202 HABP4Q5JVS0 413 aaKnown RBP14.79□□□□□ -0.04
COL20A1-203ENST00000422202 ELMSAN1Q6PJG2 1045 aa14.79□□□□□ -0.04
COL20A1-203ENST00000422202 CMTR1Q8N1G2 835 aaKnown RBP14.79□□□□□ -0.04
COL20A1-203ENST00000422202 CEP19Q96LK0 163 aa14.79□□□□□ -0.04
COL20A1-203ENST00000422202 M0R2C6 588 aa14.79□□□□□ -0.04
COL20A1-203ENST00000422202 A6NNZ2 444 aa14.79□□□□□ -0.04
COL20A1-203ENST00000422202 THOC5Q13769 683 aaKnown RBP14.79□□□□□ -0.04
COL20A1-203ENST00000422202 EIF4A2Q14240 407 aaKnown RBP14.79□□□□□ -0.04
COL20A1-203ENST00000422202 MTHFSDQ2M296 383 aaKnown RBP14.79□□□□□ -0.04
COL20A1-203ENST00000422202 TUBB8Q3ZCM7 444 aa14.79□□□□□ -0.04
COL20A1-203ENST00000422202 PPP1R16BQ96T49 567 aa14.79□□□□□ -0.04
COL20A1-203ENST00000422202 STX1BP61266 288 aa14.79□□□□□ -0.04
COL20A1-203ENST00000422202 TEKT3Q9BXF9 490 aa14.79□□□□□ -0.04
COL20A1-203ENST00000422202 OGFRQ9NZT2 677 aa14.79□□□□□ -0.04
COL20A1-203ENST00000422202 ZNF532Q9HCE3 1301 aa14.78□□□□□ -0.04
COL20A1-203ENST00000422202 NLRP12P59046 1061 aa14.78□□□□□ -0.04
COL20A1-203ENST00000422202 PHLDB3Q6NSJ2 640 aa14.78□□□□□ -0.04
COL20A1-203ENST00000422202 SART1O43290 800 aaKnown RBP14.78□□□□□ -0.04
COL20A1-203ENST00000422202 C7orf31Q8N865 590 aa14.78□□□□□ -0.04
COL20A1-203ENST00000422202 ZKSCAN5Q9Y2L8 839 aa14.78□□□□□ -0.04
COL20A1-203ENST00000422202 XPOTO43592 962 aaKnown RBP14.78□□□□□ -0.04
COL20A1-203ENST00000422202 YWHAGP61981 247 aaKnown RBP eCLIP14.78□□□□□ -0.04
COL20A1-203ENST00000422202 PDE1BQ01064 536 aa14.78□□□□□ -0.04
COL20A1-203ENST00000422202 RNF219Q5W0B1 726 aaPredicted RBP14.78□□□□□ -0.04
COL20A1-203ENST00000422202 ATP6V0A1Q93050 837 aa14.78□□□□□ -0.04
COL20A1-203ENST00000422202 COG4Q9H9E3 785 aa14.78□□□□□ -0.04
COL20A1-203ENST00000422202 RETREG2Q8NC44 543 aa14.78□□□□□ -0.04
COL20A1-203ENST00000422202 FBXL13Q8NEE6 735 aa14.78□□□□□ -0.04
COL20A1-203ENST00000422202 WDR48Q8TAF3 677 aa14.78□□□□□ -0.04
COL20A1-203ENST00000422202 LRRC8CQ8TDW0 803 aa14.78□□□□□ -0.04
COL20A1-203ENST00000422202 PRDM5Q9NQX1 630 aaPredicted RBP14.78□□□□□ -0.04
COL20A1-203ENST00000422202 SH3TC1Q8TE82 1336 aa14.78□□□□□ -0.04
COL20A1-203ENST00000422202 RAP1GDS1P52306 607 aa14.78□□□□□ -0.04
COL20A1-203ENST00000422202 TTC25Q96NG3 672 aa14.78□□□□□ -0.04
COL20A1-203ENST00000422202 RALGAPBQ86X10 1494 aa14.78□□□□□ -0.04
COL20A1-203ENST00000422202 YTHDC2Q9H6S0 1430 aaKnown RBP14.78□□□□□ -0.04
COL20A1-203ENST00000422202 ACTN1P12814 892 aa14.77□□□□□ -0.04
COL20A1-203ENST00000422202 PNOCQ13519 176 aa14.77□□□□□ -0.04
COL20A1-203ENST00000422202 TNNI3KQ59H18 835 aa14.77□□□□□ -0.04
COL20A1-203ENST00000422202 TMTC1Q8IUR5 882 aa14.77□□□□□ -0.04
COL20A1-203ENST00000422202 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.77□□□□□ -0.04
COL20A1-203ENST00000422202 UHMK1Q8TAS1 419 aaKnown RBP14.77□□□□□ -0.04
COL20A1-203ENST00000422202 APPBP2Q92624 585 aa14.77□□□□□ -0.04
COL20A1-203ENST00000422202 PPP1R9AQ9ULJ8 1098 aa14.77□□□□□ -0.04
COL20A1-203ENST00000422202 FPGT-TNNI3KV9GXZ4 949 aa14.77□□□□□ -0.04
COL20A1-203ENST00000422202 ELMOD1Q8N336 334 aa14.77□□□□□ -0.04
COL20A1-203ENST00000422202 ARHGEF1Q92888 912 aaKnown RBP14.77□□□□□ -0.04
COL20A1-203ENST00000422202 SYNDIG1Q9H7V2 258 aa14.77□□□□□ -0.04
COL20A1-203ENST00000422202 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.77□□□□□ -0.04
COL20A1-203ENST00000422202 ESRRBO95718 433 aa14.77□□□□□ -0.04
COL20A1-203ENST00000422202 FRA10AC1Q70Z53 315 aa14.77□□□□□ -0.04
COL20A1-203ENST00000422202 SNX19Q92543 992 aa14.77□□□□□ -0.05
COL20A1-203ENST00000422202 INPP5FQ9Y2H2 1132 aa14.77□□□□□ -0.05
COL20A1-203ENST00000422202 ANKRD20A4Q4UJ75 823 aa14.77□□□□□ -0.05
COL20A1-203ENST00000422202 ANKRD20A8PQ5CZ79 823 aa14.77□□□□□ -0.05
COL20A1-203ENST00000422202 ANKRD20A2Q5SQ80 823 aa14.77□□□□□ -0.05
COL20A1-203ENST00000422202 ANKRD20A1Q5TYW2 823 aa14.77□□□□□ -0.05
COL20A1-203ENST00000422202 KIAA0825Q8IV33 1275 aa14.77□□□□□ -0.05
COL20A1-203ENST00000422202 RNF139Q8WU17 664 aa14.77□□□□□ -0.05
COL20A1-203ENST00000422202 FANCAO15360 1455 aa14.77□□□□□ -0.05
COL20A1-203ENST00000422202 MROH5Q6ZUA9 1318 aa14.77□□□□□ -0.05
COL20A1-203ENST00000422202 TMEM247A6NEH6 219 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms