RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 SLC37A4O43826 429 aa14.97□□□□□ -0.01
MCF2L-213ENST00000421756 FAM193AP78312 1265 aa14.97□□□□□ -0.01
MCF2L-213ENST00000421756 GRM4Q14833 912 aa14.97□□□□□ -0.01
MCF2L-213ENST00000421756 APTXQ7Z2E3 356 aaKnown RBP14.97□□□□□ -0.01
MCF2L-213ENST00000421756 CCDC148Q8NFR7 591 aa14.97□□□□□ -0.01
MCF2L-213ENST00000421756 NOC3LQ8WTT2 800 aaKnown RBP14.97□□□□□ -0.01
MCF2L-213ENST00000421756 LRWD1Q9UFC0 647 aa14.97□□□□□ -0.01
MCF2L-213ENST00000421756 OR52Z1P0C646 297 aa14.97□□□□□ -0.01
MCF2L-213ENST00000421756 APBA1Q02410 837 aa14.97□□□□□ -0.01
MCF2L-213ENST00000421756 STIM1Q13586 685 aa14.97□□□□□ -0.01
MCF2L-213ENST00000421756 ZNF658Q5TYW1 1059 aaPredicted RBP14.97□□□□□ -0.01
MCF2L-213ENST00000421756 SH3RF1Q7Z6J0 888 aa14.97□□□□□ -0.01
MCF2L-213ENST00000421756 KLHL34Q8N239 644 aa14.97□□□□□ -0.01
MCF2L-213ENST00000421756 PARD6BQ9BYG5 372 aa14.97□□□□□ -0.01
MCF2L-213ENST00000421756 TRIM34Q9BYJ4 488 aa14.97□□□□□ -0.01
MCF2L-213ENST00000421756 ARGLU1Q9NWB6 273 aaPredicted RBP14.97□□□□□ -0.01
MCF2L-213ENST00000421756 LUC7L2Q9Y383 392 aaKnown RBP14.97□□□□□ -0.01
MCF2L-213ENST00000421756 CNTNAP4Q9C0A0 1308 aa14.97□□□□□ -0.01
MCF2L-213ENST00000421756 PAPPAQ13219 1627 aa14.97□□□□□ -0.01
MCF2L-213ENST00000421756 PLEKP08567 350 aaPredicted RBP14.96□□□□□ -0.01
MCF2L-213ENST00000421756 RNASE9P60153 205 aaKnown RBP14.96□□□□□ -0.01
MCF2L-213ENST00000421756 VPS72Q15906 364 aa14.96□□□□□ -0.01
MCF2L-213ENST00000421756 ANKRD40Q6AI12 368 aa14.96□□□□□ -0.01
MCF2L-213ENST00000421756 NOC4LQ9BVI4 516 aaKnown RBP14.96□□□□□ -0.01
MCF2L-213ENST00000421756 LEMD3Q9Y2U8 911 aa14.96□□□□□ -0.01
MCF2L-213ENST00000421756 DAGLAQ9Y4D2 1042 aa14.96□□□□□ -0.01
MCF2L-213ENST00000421756 USP17L10C9JJH3 530 aa14.96□□□□□ -0.01
MCF2L-213ENST00000421756 DDR1Q08345 913 aa14.96□□□□□ -0.01
MCF2L-213ENST00000421756 NEK8Q86SG6 692 aa14.96□□□□□ -0.01
MCF2L-213ENST00000421756 SMAP1Q8IYB5 467 aaPredicted RBP14.96□□□□□ -0.01
MCF2L-213ENST00000421756 SNX29Q8TEQ0 813 aa14.96□□□□□ -0.01
MCF2L-213ENST00000421756 NLRC4Q9NPP4 1024 aa14.96□□□□□ -0.01
MCF2L-213ENST00000421756 NPHP3-ACAD11A0A0J9YXS1 232 aa14.96□□□□□ -0.01
MCF2L-213ENST00000421756 MEIS1O00470 390 aa14.96□□□□□ -0.01
MCF2L-213ENST00000421756 UBXN2AP68543 259 aa14.96□□□□□ -0.01
MCF2L-213ENST00000421756 CALCRLQ16602 461 aa14.96□□□□□ -0.01
MCF2L-213ENST00000421756 DNAAF5Q86Y56 855 aa14.96□□□□□ -0.01
MCF2L-213ENST00000421756 CTAGE1Q96RT6 745 aa14.96□□□□□ -0.01
MCF2L-213ENST00000421756 L2HGDHQ9H9P8 463 aa14.96□□□□□ -0.01
MCF2L-213ENST00000421756 ABHD10Q9NUJ1 306 aa14.96□□□□□ -0.01
MCF2L-213ENST00000421756 MYH15Q9Y2K3 1946 aa14.96□□□□□ -0.02
MCF2L-213ENST00000421756 TADA3O75528 432 aa14.95□□□□□ -0.02
MCF2L-213ENST00000421756 GNAQP50148 359 aa14.95□□□□□ -0.02
MCF2L-213ENST00000421756 CCDC122Q5T0U0 273 aa14.95□□□□□ -0.02
MCF2L-213ENST00000421756 RBM17Q96I25 401 aaKnown RBP14.95□□□□□ -0.02
MCF2L-213ENST00000421756 TUBGCP2Q9BSJ2 902 aa14.95□□□□□ -0.02
MCF2L-213ENST00000421756 LONP1P36776 959 aaKnown RBP14.95□□□□□ -0.02
MCF2L-213ENST00000421756 CHMP4BP1P59074 171 aa14.95□□□□□ -0.02
MCF2L-213ENST00000421756 MAPK8IP2Q13387 824 aaPredicted RBP14.95□□□□□ -0.02
MCF2L-213ENST00000421756 SBK1Q52WX2 424 aa14.95□□□□□ -0.02
MCF2L-213ENST00000421756 C4orf32Q8N8J7 132 aa14.95□□□□□ -0.02
MCF2L-213ENST00000421756 SPATA20Q8TB22 786 aa14.95□□□□□ -0.02
MCF2L-213ENST00000421756 CAGE1Q8TC20 777 aa14.95□□□□□ -0.02
MCF2L-213ENST00000421756 AFF2P51816 1311 aa14.95□□□□□ -0.02
MCF2L-213ENST00000421756 KRT18P05783 430 aaKnown RBP14.95□□□□□ -0.02
MCF2L-213ENST00000421756 PNMA6AP0CW24 399 aaPredicted RBP14.95□□□□□ -0.02
MCF2L-213ENST00000421756 CXCR5P32302 372 aa14.95□□□□□ -0.02
MCF2L-213ENST00000421756 STAT3P40763 770 aa14.95□□□□□ -0.02
MCF2L-213ENST00000421756 CNGA4Q8IV77 575 aa14.95□□□□□ -0.02
MCF2L-213ENST00000421756 RGS22Q8NE09 1264 aa14.95□□□□□ -0.02
MCF2L-213ENST00000421756 CALML4Q96GE6 196 aa14.95□□□□□ -0.02
MCF2L-213ENST00000421756 GJD4Q96KN9 370 aaPredicted RBP14.95□□□□□ -0.02
MCF2L-213ENST00000421756 CCDC93Q567U6 631 aa14.94□□□□□ -0.02
MCF2L-213ENST00000421756 CDKAL1Q5VV42 579 aa14.94□□□□□ -0.02
MCF2L-213ENST00000421756 IRF2BP1Q8IU81 584 aa14.94□□□□□ -0.02
MCF2L-213ENST00000421756 CNOT6LQ96LI5 555 aaKnown RBP14.94□□□□□ -0.02
MCF2L-213ENST00000421756 FEZ1Q99689 392 aa14.94□□□□□ -0.02
MCF2L-213ENST00000421756 JADE2Q9NQC1 790 aa14.94□□□□□ -0.02
MCF2L-213ENST00000421756 SMARCAL1Q9NZC9 954 aa14.94□□□□□ -0.02
MCF2L-213ENST00000421756 ABCA3Q99758 1704 aa14.94□□□□□ -0.02
MCF2L-213ENST00000421756 MYH6P13533 1939 aa14.94□□□□□ -0.02
MCF2L-213ENST00000421756 CTAGE9A4FU28 777 aa14.94□□□□□ -0.02
MCF2L-213ENST00000421756 KCNK18Q7Z418 384 aa14.94□□□□□ -0.02
MCF2L-213ENST00000421756 GSPT2Q8IYD1 628 aaKnown RBP14.94□□□□□ -0.02
MCF2L-213ENST00000421756 CERS5Q8N5B7 392 aa14.94□□□□□ -0.02
MCF2L-213ENST00000421756 DEF6Q9H4E7 631 aa14.94□□□□□ -0.02
MCF2L-213ENST00000421756 MKRN1Q9UHC7 482 aaKnown RBP14.94□□□□□ -0.02
MCF2L-213ENST00000421756 RWDD2AQ9UIY3 292 aa14.94□□□□□ -0.02
MCF2L-213ENST00000421756 BCL9LQ86UU0 1499 aa14.94□□□□□ -0.02
MCF2L-213ENST00000421756 FCHSD1Q86WN1 690 aa14.94□□□□□ -0.02
MCF2L-213ENST00000421756 RMND1Q9NWS8 449 aa14.94□□□□□ -0.02
MCF2L-213ENST00000421756 PALM3A6NDB9 673 aaPredicted RBP14.93□□□□□ -0.02
MCF2L-213ENST00000421756 GNA11P29992 359 aa14.93□□□□□ -0.02
MCF2L-213ENST00000421756 CYP4A11Q02928 519 aa14.93□□□□□ -0.02
MCF2L-213ENST00000421756 TMX4Q9H1E5 349 aaPredicted RBP14.93□□□□□ -0.02
MCF2L-213ENST00000421756 QTRT2Q9H974 415 aaKnown RBP14.93□□□□□ -0.02
MCF2L-213ENST00000421756 ZNF287Q9HBT7 754 aa14.93□□□□□ -0.02
MCF2L-213ENST00000421756 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.93□□□□□ -0.02
MCF2L-213ENST00000421756 PHLPP2Q6ZVD8 1323 aa14.93□□□□□ -0.02
MCF2L-213ENST00000421756 ZNF185O15231 689 aa14.93□□□□□ -0.02
MCF2L-213ENST00000421756 FGRP09769 529 aa14.93□□□□□ -0.02
MCF2L-213ENST00000421756 RHBDL3P58872 404 aa14.93□□□□□ -0.02
MCF2L-213ENST00000421756 BMS1Q14692 1282 aaKnown RBP14.93□□□□□ -0.02
MCF2L-213ENST00000421756 CCDC47Q96A33 483 aaKnown RBP14.93□□□□□ -0.02
MCF2L-213ENST00000421756 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.93□□□□□ -0.02
MCF2L-213ENST00000421756 PKD2L1Q9P0L9 805 aa14.93□□□□□ -0.02
MCF2L-213ENST00000421756 EPN1Q9Y6I3 576 aaPredicted RBP14.93□□□□□ -0.02
MCF2L-213ENST00000421756 IPO7O95373 1038 aaKnown RBP14.93□□□□□ -0.02
MCF2L-213ENST00000421756 PDHBP11177 359 aa14.93□□□□□ -0.02
MCF2L-213ENST00000421756 HOXA13P31271 388 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 674.5 ms