RNA–Protein interactions for RNA: ENST00000421722.5

PMS1-208, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,285 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-208ENST00000421722 USP17L12C9JPN9 530 aa7.98□□□□□ -1.13
PMS1-208ENST00000421722 USP17L21D6R901 530 aa7.98□□□□□ -1.13
PMS1-208ENST00000421722 EFCAB14O75071 495 aa7.98□□□□□ -1.13
PMS1-208ENST00000421722 PKN1Q16512 942 aa7.98□□□□□ -1.13
PMS1-208ENST00000421722 SLC9C2Q5TAH2 1124 aa7.98□□□□□ -1.13
PMS1-208ENST00000421722 CLEC10AQ8IUN9 316 aa7.98□□□□□ -1.13
PMS1-208ENST00000421722 RPAP2Q8IXW5 612 aaPredicted RBP7.98□□□□□ -1.13
PMS1-208ENST00000421722 LCORLQ8N3X6 602 aa7.98□□□□□ -1.13
PMS1-208ENST00000421722 SCLYQ96I15 445 aa7.98□□□□□ -1.13
PMS1-208ENST00000421722 MTG1Q9BT17 334 aaPredicted RBP7.98□□□□□ -1.13
PMS1-208ENST00000421722 UPF3BQ9BZI7 483 aaKnown RBP7.98□□□□□ -1.13
PMS1-208ENST00000421722 ACAD9Q9H845 621 aa7.98□□□□□ -1.13
PMS1-208ENST00000421722 TLR7Q9NYK1 1049 aaKnown RBP7.98□□□□□ -1.13
PMS1-208ENST00000421722 ZNF536O15090 1300 aa7.98□□□□□ -1.13
PMS1-208ENST00000421722 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.98□□□□□ -1.13
PMS1-208ENST00000421722 C19orf67A6NJJ6 358 aa7.98□□□□□ -1.13
PMS1-208ENST00000421722 DYNC1LI2O43237 492 aaPredicted RBP7.98□□□□□ -1.13
PMS1-208ENST00000421722 ST18O60284 1047 aa7.98□□□□□ -1.13
PMS1-208ENST00000421722 IQCF3P0C7M6 154 aa7.98□□□□□ -1.13
PMS1-208ENST00000421722 SMPD1P17405 629 aa7.98□□□□□ -1.13
PMS1-208ENST00000421722 EVX2Q03828 476 aa7.98□□□□□ -1.13
PMS1-208ENST00000421722 NOL8Q76FK4 1167 aaKnown RBP7.98□□□□□ -1.13
PMS1-208ENST00000421722 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.98□□□□□ -1.13
PMS1-208ENST00000421722 MKL1Q969V6 931 aa7.98□□□□□ -1.13
PMS1-208ENST00000421722 CERS4Q9HA82 394 aa7.98□□□□□ -1.13
PMS1-208ENST00000421722 CTNNA3Q9UI47 895 aa7.98□□□□□ -1.13
PMS1-208ENST00000421722 RBM47A0AV96 593 aaKnown RBP7.97□□□□□ -1.13
PMS1-208ENST00000421722 SOWAHBA6NEL2 793 aa7.97□□□□□ -1.13
PMS1-208ENST00000421722 F5H6K3 240 aa7.97□□□□□ -1.13
PMS1-208ENST00000421722 PLA2G6O60733 806 aa7.97□□□□□ -1.13
PMS1-208ENST00000421722 NDUFB10O96000 172 aa7.97□□□□□ -1.13
PMS1-208ENST00000421722 KCNJ6P48051 423 aa7.97□□□□□ -1.13
PMS1-208ENST00000421722 KLRC3Q07444 240 aa7.97□□□□□ -1.13
PMS1-208ENST00000421722 KRT40Q6A162 431 aa7.97□□□□□ -1.13
PMS1-208ENST00000421722 TAPT1Q6NXT6 567 aa7.97□□□□□ -1.13
PMS1-208ENST00000421722 NFRKBQ6P4R8 1299 aa7.97□□□□□ -1.13
PMS1-208ENST00000421722 SDR42E1Q8WUS8 393 aa7.97□□□□□ -1.13
PMS1-208ENST00000421722 SAMD11Q96NU1 681 aa7.97□□□□□ -1.13
PMS1-208ENST00000421722 TGS1Q96RS0 853 aaKnown RBP7.97□□□□□ -1.13
PMS1-208ENST00000421722 RAVER2Q9HCJ3 691 aaKnown RBP7.97□□□□□ -1.13
PMS1-208ENST00000421722 IGKV6D-41A0A0C4DH26 115 aa7.96□□□□□ -1.13
PMS1-208ENST00000421722 NKRFO15226 690 aaKnown RBP eCLIP7.96□□□□□ -1.13
PMS1-208ENST00000421722 SSTR3P32745 418 aaPredicted RBP7.96□□□□□ -1.13
PMS1-208ENST00000421722 CPT1AP50416 773 aa7.96□□□□□ -1.13
PMS1-208ENST00000421722 PSMC6P62333 389 aa7.96□□□□□ -1.13
PMS1-208ENST00000421722 DUSP28Q4G0W2 176 aa7.96□□□□□ -1.13
PMS1-208ENST00000421722 SBK1Q52WX2 424 aa7.96□□□□□ -1.13
PMS1-208ENST00000421722 HSP90AB4PQ58FF6 505 aa7.96□□□□□ -1.13
PMS1-208ENST00000421722 PTCRAQ6ISU1 281 aaPredicted RBP7.96□□□□□ -1.13
PMS1-208ENST00000421722 DEFB128Q7Z7B8 93 aa7.96□□□□□ -1.13
PMS1-208ENST00000421722 FAM160B2Q86V87 743 aa7.96□□□□□ -1.13
PMS1-208ENST00000421722 GMCL1P1Q8NEA9 526 aa7.96□□□□□ -1.13
PMS1-208ENST00000421722 NEK9Q8TD19 979 aa7.96□□□□□ -1.13
PMS1-208ENST00000421722 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.96□□□□□ -1.13
PMS1-208ENST00000421722 ARMT1Q9H993 441 aa7.96□□□□□ -1.13
PMS1-208ENST00000421722 U3KPZ7 1027 aaPredicted RBP7.96□□□□□ -1.13
PMS1-208ENST00000421722 ARHGEF15O94989 841 aa7.96□□□□□ -1.14
PMS1-208ENST00000421722 ADD2P35612 726 aa7.96□□□□□ -1.14
PMS1-208ENST00000421722 PTPN5P54829 565 aa7.96□□□□□ -1.14
PMS1-208ENST00000421722 RBL2Q08999 1139 aa7.96□□□□□ -1.14
PMS1-208ENST00000421722 BRDTQ58F21 947 aaPredicted RBP7.96□□□□□ -1.14
PMS1-208ENST00000421722 CNKSR3Q6P9H4 555 aa7.96□□□□□ -1.14
PMS1-208ENST00000421722 BMP8AQ7Z5Y6 402 aa7.96□□□□□ -1.14
PMS1-208ENST00000421722 CPXCR1Q8N123 301 aa7.96□□□□□ -1.14
PMS1-208ENST00000421722 CAGE1Q8TC20 777 aa7.96□□□□□ -1.14
PMS1-208ENST00000421722 AFAP1L1Q8TED9 768 aa7.96□□□□□ -1.14
PMS1-208ENST00000421722 UIMC1Q96RL1 719 aa7.96□□□□□ -1.14
PMS1-208ENST00000421722 RAD9AQ99638 391 aa7.96□□□□□ -1.14
PMS1-208ENST00000421722 FTOQ9C0B1 505 aaKnown RBP eCLIP7.96□□□□□ -1.14
PMS1-208ENST00000421722 ARPP21Q9UBL0 812 aaPredicted RBP7.96□□□□□ -1.14
PMS1-208ENST00000421722 ABHD14A-ACY1A0A1B0GW23 586 aa7.95□□□□□ -1.14
PMS1-208ENST00000421722 NCK2O43639 380 aa7.95□□□□□ -1.14
PMS1-208ENST00000421722 BCAR3O75815 825 aa7.95□□□□□ -1.14
PMS1-208ENST00000421722 MBD4O95243 580 aa7.95□□□□□ -1.14
PMS1-208ENST00000421722 ATXN8OSP0DMR3 200 aa7.95□□□□□ -1.14
PMS1-208ENST00000421722 CYP2C9P11712 490 aa7.95□□□□□ -1.14
PMS1-208ENST00000421722 TRIM27P14373 513 aa7.95□□□□□ -1.14
PMS1-208ENST00000421722 PURAQ00577 322 aaKnown RBP7.95□□□□□ -1.14
PMS1-208ENST00000421722 CNTN2Q02246 1040 aa7.95□□□□□ -1.14
PMS1-208ENST00000421722 COL19A1Q14993 1142 aa7.95□□□□□ -1.14
PMS1-208ENST00000421722 PTPROQ16827 1216 aa7.95□□□□□ -1.14
PMS1-208ENST00000421722 TIGD5Q53EQ6 642 aa7.95□□□□□ -1.14
PMS1-208ENST00000421722 GIMAP6Q6P9H5 292 aa7.95□□□□□ -1.14
PMS1-208ENST00000421722 AACSQ86V21 672 aa7.95□□□□□ -1.14
PMS1-208ENST00000421722 CHURC1Q8WUH1 139 aa7.95□□□□□ -1.14
PMS1-208ENST00000421722 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.95□□□□□ -1.14
PMS1-208ENST00000421722 IRF2BPLQ9H1B7 796 aa7.95□□□□□ -1.14
PMS1-208ENST00000421722 TRMT13Q9NUP7 481 aaKnown RBP7.95□□□□□ -1.14
PMS1-208ENST00000421722 MCM3APO60318 1980 aa7.95□□□□□ -1.14
PMS1-208ENST00000421722 RAD50Q92878 1312 aa7.95□□□□□ -1.14
PMS1-208ENST00000421722 SIP14410 1827 aa7.95□□□□□ -1.14
PMS1-208ENST00000421722 CXCL10P02778 98 aa7.95□□□□□ -1.14
PMS1-208ENST00000421722 WDR5P61964 334 aaKnown RBP7.95□□□□□ -1.14
PMS1-208ENST00000421722 UBE3CQ15386 1083 aa7.95□□□□□ -1.14
PMS1-208ENST00000421722 PPP4R3BQ5MIZ7 849 aa7.95□□□□□ -1.14
PMS1-208ENST00000421722 CTR9Q6PD62 1173 aa7.95□□□□□ -1.14
PMS1-208ENST00000421722 SESTD1Q86VW0 696 aa7.95□□□□□ -1.14
PMS1-208ENST00000421722 GDPD5Q8WTR4 605 aa7.95□□□□□ -1.14
PMS1-208ENST00000421722 STAG1Q8WVM7 1258 aa7.95□□□□□ -1.14
PMS1-208ENST00000421722 KIFC2Q96AC6 838 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms