RNA–Protein interactions for RNA: ENST00000421689.6

CAST-208, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-208ENST00000421689 DDX11Q96FC9 970 aa13.61□□□□□ -0.23
CAST-208ENST00000421689 INTS4Q96HW7 963 aaKnown RBP13.61□□□□□ -0.23
CAST-208ENST00000421689 TRERF1Q96PN7 1200 aa13.61□□□□□ -0.23
CAST-208ENST00000421689 MROH8Q9H579 483 aa13.61□□□□□ -0.23
CAST-208ENST00000421689 FBXO40Q9UH90 709 aa13.61□□□□□ -0.23
CAST-208ENST00000421689 MRPL11Q9Y3B7 192 aaKnown RBP13.61□□□□□ -0.23
CAST-208ENST00000421689 RIPK3Q9Y572 518 aa13.61□□□□□ -0.23
CAST-208ENST00000421689 MGAMO43451 1857 aa13.61□□□□□ -0.23
CAST-208ENST00000421689 ERCC3P19447 782 aa13.6□□□□□ -0.23
CAST-208ENST00000421689 MAPK4P31152 587 aa13.6□□□□□ -0.23
CAST-208ENST00000421689 ANP32AP39687 249 aaKnown RBP13.6□□□□□ -0.23
CAST-208ENST00000421689 KIF22Q14807 665 aa13.6□□□□□ -0.23
CAST-208ENST00000421689 CCDC12Q8WUD4 166 aaPredicted RBP13.6□□□□□ -0.23
CAST-208ENST00000421689 GPKOWQ92917 476 aaPredicted RBP eCLIP13.6□□□□□ -0.23
CAST-208ENST00000421689 PORCNQ9H237 461 aa13.6□□□□□ -0.23
CAST-208ENST00000421689 ACAD9Q9H845 621 aa13.6□□□□□ -0.23
CAST-208ENST00000421689 CWC22Q9HCG8 908 aaKnown RBP13.6□□□□□ -0.23
CAST-208ENST00000421689 HOMER2Q9NSB8 354 aa13.6□□□□□ -0.23
CAST-208ENST00000421689 RNF146Q9NTX7 359 aa13.6□□□□□ -0.23
CAST-208ENST00000421689 BARHL2Q9NY43 387 aa13.6□□□□□ -0.23
CAST-208ENST00000421689 SMC3Q9UQE7 1217 aa13.6□□□□□ -0.23
CAST-208ENST00000421689 RBBP6Q7Z6E9 1792 aaKnown RBP13.59□□□□□ -0.23
CAST-208ENST00000421689 DTNBO60941 627 aa13.59□□□□□ -0.23
CAST-208ENST00000421689 FKTNO75072 461 aa13.59□□□□□ -0.23
CAST-208ENST00000421689 HSP90AA1P07900 732 aaKnown RBP13.59□□□□□ -0.23
CAST-208ENST00000421689 TAL1P17542 331 aaPredicted RBP13.59□□□□□ -0.23
CAST-208ENST00000421689 XBP1P17861 261 aa13.59□□□□□ -0.23
CAST-208ENST00000421689 NAPAP54920 295 aa13.59□□□□□ -0.23
CAST-208ENST00000421689 LACTBP83111 547 aaPredicted RBP13.59□□□□□ -0.23
CAST-208ENST00000421689 WDR78Q5VTH9 848 aa13.59□□□□□ -0.23
CAST-208ENST00000421689 WWC2Q6AWC2 1192 aa13.59□□□□□ -0.23
CAST-208ENST00000421689 PPP1R18Q6NYC8 613 aa13.59□□□□□ -0.23
CAST-208ENST00000421689 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.59□□□□□ -0.23
CAST-208ENST00000421689 MCF2L2Q86YR7 1114 aa13.59□□□□□ -0.23
CAST-208ENST00000421689 FAM177A1Q8N128 213 aaPredicted RBP13.59□□□□□ -0.23
CAST-208ENST00000421689 FAM184AQ8NB25 1140 aa13.59□□□□□ -0.23
CAST-208ENST00000421689 MAF1Q9H063 256 aa13.59□□□□□ -0.23
CAST-208ENST00000421689 EFCC1Q9HA90 598 aa13.59□□□□□ -0.23
CAST-208ENST00000421689 SH3GLB2Q9NR46 395 aa13.59□□□□□ -0.23
CAST-208ENST00000421689 TSKSQ9UJT2 592 aa13.59□□□□□ -0.23
CAST-208ENST00000421689 KIF3AQ9Y496 699 aa13.59□□□□□ -0.23
CAST-208ENST00000421689 RBM19Q9Y4C8 960 aaKnown RBP13.59□□□□□ -0.23
CAST-208ENST00000421689 CEP350Q5VT06 3117 aa13.59□□□□□ -0.23
CAST-208ENST00000421689 ZNFX1Q9P2E3 1918 aaKnown RBP13.58□□□□□ -0.23
CAST-208ENST00000421689 PLXNB2O15031 1838 aa13.58□□□□□ -0.24
CAST-208ENST00000421689 STXBP3O00186 592 aa13.58□□□□□ -0.24
CAST-208ENST00000421689 STRNO43815 780 aa13.58□□□□□ -0.24
CAST-208ENST00000421689 GJB2P29033 226 aa13.58□□□□□ -0.24
CAST-208ENST00000421689 FCGRTP55899 365 aa13.58□□□□□ -0.24
CAST-208ENST00000421689 MUM1L1Q5H9M0 696 aa13.58□□□□□ -0.24
CAST-208ENST00000421689 PLEKHH3Q7Z736 793 aa13.58□□□□□ -0.24
CAST-208ENST00000421689 SAMD3Q8N6K7 520 aa13.58□□□□□ -0.24
CAST-208ENST00000421689 RGS22Q8NE09 1264 aa13.58□□□□□ -0.24
CAST-208ENST00000421689 CCDC148Q8NFR7 591 aa13.58□□□□□ -0.24
CAST-208ENST00000421689 CLEC4DQ8WXI8 215 aa13.58□□□□□ -0.24
CAST-208ENST00000421689 ALG1Q9BT22 464 aa13.58□□□□□ -0.24
CAST-208ENST00000421689 IVNS1ABPQ9Y6Y0 642 aa13.58□□□□□ -0.24
CAST-208ENST00000421689 NFIBO00712 420 aa13.57□□□□□ -0.24
CAST-208ENST00000421689 TNPO2O14787 897 aaKnown RBP13.57□□□□□ -0.24
CAST-208ENST00000421689 FCER1AP12319 257 aa13.57□□□□□ -0.24
CAST-208ENST00000421689 PSMC4P43686 418 aa13.57□□□□□ -0.24
CAST-208ENST00000421689 KCTD2Q14681 263 aa13.57□□□□□ -0.24
CAST-208ENST00000421689 ARHGEF6Q15052 776 aa13.57□□□□□ -0.24
CAST-208ENST00000421689 TYW1BQ6NUM6 668 aa13.57□□□□□ -0.24
CAST-208ENST00000421689 GPR142Q7Z601 462 aa13.57□□□□□ -0.24
CAST-208ENST00000421689 TEX2Q8IWB9 1127 aa13.57□□□□□ -0.24
CAST-208ENST00000421689 ABRAQ8N0Z2 381 aa13.57□□□□□ -0.24
CAST-208ENST00000421689 ANKRD35Q8N283 1001 aa13.57□□□□□ -0.24
CAST-208ENST00000421689 ZNF296Q8WUU4 475 aaPredicted RBP13.57□□□□□ -0.24
CAST-208ENST00000421689 ERO1AQ96HE7 468 aa13.57□□□□□ -0.24
CAST-208ENST00000421689 AIFM3Q96NN9 605 aa13.57□□□□□ -0.24
CAST-208ENST00000421689 MMP19Q99542 508 aa13.57□□□□□ -0.24
CAST-208ENST00000421689 GLT8D2Q9H1C3 349 aa13.57□□□□□ -0.24
CAST-208ENST00000421689 MAP3K20Q9NYL2 800 aaKnown RBP13.57□□□□□ -0.24
CAST-208ENST00000421689 VPS54Q9P1Q0 977 aa13.57□□□□□ -0.24
CAST-208ENST00000421689 ESYT2A0FGR8 921 aa13.56□□□□□ -0.24
CAST-208ENST00000421689 SMCO2A6NFE2 343 aa13.56□□□□□ -0.24
CAST-208ENST00000421689 HSPA1AP0DMV8 641 aaKnown RBP13.56□□□□□ -0.24
CAST-208ENST00000421689 HSPA1BP0DMV9 641 aaKnown RBP13.56□□□□□ -0.24
CAST-208ENST00000421689 PTPREP23469 700 aa13.56□□□□□ -0.24
CAST-208ENST00000421689 GNA11P29992 359 aa13.56□□□□□ -0.24
CAST-208ENST00000421689 MRPL12P52815 198 aaKnown RBP13.56□□□□□ -0.24
CAST-208ENST00000421689 NLRP5P59047 1200 aa13.56□□□□□ -0.24
CAST-208ENST00000421689 TRIM29Q14134 588 aa13.56□□□□□ -0.24
CAST-208ENST00000421689 NSMFQ6X4W1 530 aa13.56□□□□□ -0.24
CAST-208ENST00000421689 RNF207Q6ZRF8 634 aa13.56□□□□□ -0.24
CAST-208ENST00000421689 CUL5Q93034 780 aa13.56□□□□□ -0.24
CAST-208ENST00000421689 ZMYND12Q9H0C1 365 aa13.56□□□□□ -0.24
CAST-208ENST00000421689 PSTPIP2Q9H939 334 aa13.56□□□□□ -0.24
CAST-208ENST00000421689 C6orf50Q9HD87 102 aa13.56□□□□□ -0.24
CAST-208ENST00000421689 RIC8AQ9NPQ8 531 aa13.56□□□□□ -0.24
CAST-208ENST00000421689 A1CFQ9NQ94 594 aaKnown RBP13.56□□□□□ -0.24
CAST-208ENST00000421689 FOXD4L1Q9NU39 408 aa13.56□□□□□ -0.24
CAST-208ENST00000421689 PFASO15067 1338 aa13.56□□□□□ -0.24
CAST-208ENST00000421689 ZSWIM8A7E2V4 1837 aa13.55□□□□□ -0.24
CAST-208ENST00000421689 SLC15A5A6NIM6 579 aa13.55□□□□□ -0.24
CAST-208ENST00000421689 GCOM1H8Y6P7 765 aaPredicted RBP13.55□□□□□ -0.24
CAST-208ENST00000421689 OPLAHO14841 1288 aa13.55□□□□□ -0.24
CAST-208ENST00000421689 FOXN1O15353 648 aa13.55□□□□□ -0.24
CAST-208ENST00000421689 ECM2O94769 699 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms