RNA–Protein interactions for RNA: ENST00000420567.7

VAT1-202, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-202ENST00000420567 FAM133AQ8N9E0 248 aa18.46■□□□□ 0.55
VAT1-202ENST00000420567 CTCFLQ8NI51 663 aaPredicted RBP18.46■□□□□ 0.55
VAT1-202ENST00000420567 CLEC4DQ8WXI8 215 aa18.46■□□□□ 0.55
VAT1-202ENST00000420567 DDX20Q9UHI6 824 aaKnown RBP18.46■□□□□ 0.55
VAT1-202ENST00000420567 PNMA2Q9UL42 364 aa18.46■□□□□ 0.55
VAT1-202ENST00000420567 PTPDC1A2A3K4 754 aa18.45■□□□□ 0.54
VAT1-202ENST00000420567 SOWAHBA6NEL2 793 aa18.45■□□□□ 0.54
VAT1-202ENST00000420567 FARP2O94887 1054 aaPredicted RBP18.45■□□□□ 0.54
VAT1-202ENST00000420567 ANO1Q5XXA6 986 aa18.45■□□□□ 0.54
VAT1-202ENST00000420567 LHX8Q68G74 356 aa18.45■□□□□ 0.54
VAT1-202ENST00000420567 TMTC2Q8N394 836 aa18.45■□□□□ 0.54
VAT1-202ENST00000420567 PURBQ96QR8 312 aaKnown RBP18.45■□□□□ 0.54
VAT1-202ENST00000420567 SLC12A7Q9Y666 1083 aa18.45■□□□□ 0.54
VAT1-202ENST00000420567 DDX49Q9Y6V7 483 aaKnown RBP18.45■□□□□ 0.54
VAT1-202ENST00000420567 CYTH3O43739 400 aa18.44■□□□□ 0.54
VAT1-202ENST00000420567 SNAI1O95863 264 aaPredicted RBP18.44■□□□□ 0.54
VAT1-202ENST00000420567 BAATQ14032 418 aaPredicted RBP18.44■□□□□ 0.54
VAT1-202ENST00000420567 ZNF467Q7Z7K2 595 aaPredicted RBP18.44■□□□□ 0.54
VAT1-202ENST00000420567 MICU3Q86XE3 530 aa18.44■□□□□ 0.54
VAT1-202ENST00000420567 FBXO11Q86XK2 927 aa18.44■□□□□ 0.54
VAT1-202ENST00000420567 DIS3LQ8TF46 1054 aaKnown RBP18.44■□□□□ 0.54
VAT1-202ENST00000420567 PIBF1Q8WXW3 757 aa18.44■□□□□ 0.54
VAT1-202ENST00000420567 PIGSQ96S52 555 aa18.44■□□□□ 0.54
VAT1-202ENST00000420567 USP26Q9BXU7 913 aa18.44■□□□□ 0.54
VAT1-202ENST00000420567 OGDHLQ9ULD0 1010 aa18.44■□□□□ 0.54
VAT1-202ENST00000420567 CNPY2Q9Y2B0 182 aa18.44■□□□□ 0.54
VAT1-202ENST00000420567 ASTN1O14525 1302 aa18.44■□□□□ 0.54
VAT1-202ENST00000420567 ABCB11O95342 1321 aa18.44■□□□□ 0.54
VAT1-202ENST00000420567 ZBTB5O15062 677 aa18.43■□□□□ 0.54
VAT1-202ENST00000420567 PPP1R11O60927 126 aaPredicted RBP18.43■□□□□ 0.54
VAT1-202ENST00000420567 PLEKHA8P1O95397 391 aa18.43■□□□□ 0.54
VAT1-202ENST00000420567 HMGB1P09429 215 aaKnown RBP18.43■□□□□ 0.54
VAT1-202ENST00000420567 CALML3P27482 149 aa18.43■□□□□ 0.54
VAT1-202ENST00000420567 KIF5BP33176 963 aa18.43■□□□□ 0.54
VAT1-202ENST00000420567 MAMDC4Q6UXC1 1216 aa18.43■□□□□ 0.54
VAT1-202ENST00000420567 RNF207Q6ZRF8 634 aa18.43■□□□□ 0.54
VAT1-202ENST00000420567 ARMCX2Q7L311 632 aa18.43■□□□□ 0.54
VAT1-202ENST00000420567 SGMS1Q86VZ5 419 aa18.43■□□□□ 0.54
VAT1-202ENST00000420567 MSL3Q8N5Y2 521 aaKnown RBP18.43■□□□□ 0.54
VAT1-202ENST00000420567 MTMR8Q96EF0 704 aa18.43■□□□□ 0.54
VAT1-202ENST00000420567 RIOX1Q9H6W3 641 aa18.43■□□□□ 0.54
VAT1-202ENST00000420567 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.43■□□□□ 0.54
VAT1-202ENST00000420567 ZHX1Q9UKY1 873 aaPredicted RBP18.43■□□□□ 0.54
VAT1-202ENST00000420567 SYNGAP1Q96PV0 1343 aa18.43■□□□□ 0.54
VAT1-202ENST00000420567 SEPT4O43236 478 aa18.42■□□□□ 0.54
VAT1-202ENST00000420567 EPB41L2O43491 1005 aaKnown RBP18.42■□□□□ 0.54
VAT1-202ENST00000420567 ZNF865P0CJ78 1059 aaPredicted RBP18.42■□□□□ 0.54
VAT1-202ENST00000420567 FGD1P98174 961 aa18.42■□□□□ 0.54
VAT1-202ENST00000420567 BLOC1S2Q6QNY1 142 aa18.42■□□□□ 0.54
VAT1-202ENST00000420567 UBE2Q1Q7Z7E8 422 aa18.42■□□□□ 0.54
VAT1-202ENST00000420567 CMTR1Q8N1G2 835 aaKnown RBP18.42■□□□□ 0.54
VAT1-202ENST00000420567 MAP3K14Q99558 947 aa18.42■□□□□ 0.54
VAT1-202ENST00000420567 AMNQ9BXJ7 453 aa18.42■□□□□ 0.54
VAT1-202ENST00000420567 NRBP1Q9UHY1 535 aa18.42■□□□□ 0.54
VAT1-202ENST00000420567 BRPF3Q9ULD4 1205 aa18.42■□□□□ 0.54
VAT1-202ENST00000420567 CENPFP49454 3210 aa18.42■□□□□ 0.54
VAT1-202ENST00000420567 MSCO60682 206 aa18.41■□□□□ 0.54
VAT1-202ENST00000420567 CALM1P0DP23 149 aa18.41■□□□□ 0.54
VAT1-202ENST00000420567 CALM2P0DP24 149 aa18.41■□□□□ 0.54
VAT1-202ENST00000420567 CALM3P0DP25 149 aa18.41■□□□□ 0.54
VAT1-202ENST00000420567 CASTP20810 708 aaKnown RBP18.41■□□□□ 0.54
VAT1-202ENST00000420567 RPS6KB1P23443 525 aa18.41■□□□□ 0.54
VAT1-202ENST00000420567 RPS6P62753 249 aaKnown RBP18.41■□□□□ 0.54
VAT1-202ENST00000420567 APOA5Q6Q788 366 aa18.41■□□□□ 0.54
VAT1-202ENST00000420567 SYNE3Q6ZMZ3 975 aa18.41■□□□□ 0.54
VAT1-202ENST00000420567 Q6ZUG5 572 aa18.41■□□□□ 0.54
VAT1-202ENST00000420567 LENG1Q96BZ8 264 aaPredicted RBP18.41■□□□□ 0.54
VAT1-202ENST00000420567 PAWRQ96IZ0 340 aaKnown RBP18.41■□□□□ 0.54
VAT1-202ENST00000420567 KLF18A0A0U1RQI7 1052 aa18.4■□□□□ 0.54
VAT1-202ENST00000420567 PSMA5P28066 241 aa18.4■□□□□ 0.54
VAT1-202ENST00000420567 MNX1P50219 401 aaPredicted RBP18.4■□□□□ 0.54
VAT1-202ENST00000420567 SRBD1Q8N5C6 995 aaKnown RBP18.4■□□□□ 0.54
VAT1-202ENST00000420567 ANKLE1Q8NAG6 615 aa18.4■□□□□ 0.54
VAT1-202ENST00000420567 TBC1D5Q92609 795 aa18.4■□□□□ 0.54
VAT1-202ENST00000420567 NAP1L2Q9ULW6 460 aaPredicted RBP18.4■□□□□ 0.54
VAT1-202ENST00000420567 MRPL11Q9Y3B7 192 aaKnown RBP18.4■□□□□ 0.54
VAT1-202ENST00000420567 PCDHA1Q9Y5I3 950 aa18.4■□□□□ 0.54
VAT1-202ENST00000420567 ASB14A6NK59 587 aa18.39■□□□□ 0.53
VAT1-202ENST00000420567 ZBTB43O43298 467 aa18.39■□□□□ 0.53
VAT1-202ENST00000420567 MYCNP04198 464 aaPredicted RBP18.39■□□□□ 0.53
VAT1-202ENST00000420567 AKR1A1P14550 325 aa18.39■□□□□ 0.53
VAT1-202ENST00000420567 CAPN2P17655 700 aa18.39■□□□□ 0.53
VAT1-202ENST00000420567 GNAQP50148 359 aa18.39■□□□□ 0.53
VAT1-202ENST00000420567 ALDH5A1P51649 535 aaPredicted RBP18.39■□□□□ 0.53
VAT1-202ENST00000420567 APOBRQ0VD83 1088 aa18.39■□□□□ 0.53
VAT1-202ENST00000420567 ACVR2BQ13705 512 aa18.39■□□□□ 0.53
VAT1-202ENST00000420567 TMTC3Q6ZXV5 915 aa18.39■□□□□ 0.53
VAT1-202ENST00000420567 FANCBQ8NB91 859 aa18.39■□□□□ 0.53
VAT1-202ENST00000420567 BRF1Q92994 677 aa18.39■□□□□ 0.53
VAT1-202ENST00000420567 LZTS2Q9BRK4 669 aa18.39■□□□□ 0.53
VAT1-202ENST00000420567 SPZ1Q9BXG8 430 aa18.39■□□□□ 0.53
VAT1-202ENST00000420567 ADD3Q9UEY8 706 aaKnown RBP18.39■□□□□ 0.53
VAT1-202ENST00000420567 PLXNA1Q9UIW2 1896 aa18.39■□□□□ 0.53
VAT1-202ENST00000420567 PNMA6FA0A0J9YX94 578 aa18.38■□□□□ 0.53
VAT1-202ENST00000420567 GOLGA8AA7E2F4 631 aa18.38■□□□□ 0.53
VAT1-202ENST00000420567 GOLGA8BA8MQT2 603 aa18.38■□□□□ 0.53
VAT1-202ENST00000420567 OPLAHO14841 1288 aa18.38■□□□□ 0.53
VAT1-202ENST00000420567 EEPD1Q7L9B9 569 aa18.38■□□□□ 0.53
VAT1-202ENST00000420567 MCF2L2Q86YR7 1114 aa18.38■□□□□ 0.53
VAT1-202ENST00000420567 FBXO16Q8IX29 292 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms