RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 SCAF8Q9UPN6 1271 aaKnown RBP15.23■□□□□ 0.03
TMEM50B-201ENST00000420455 WDR90Q96KV7 1748 aa15.23■□□□□ 0.03
TMEM50B-201ENST00000420455 MYH7BA7E2Y1 1941 aa15.23■□□□□ 0.03
TMEM50B-201ENST00000420455 ACTN4O43707 911 aaKnown RBP15.23■□□□□ 0.03
TMEM50B-201ENST00000420455 PPP4R3AQ6IN85 833 aa15.23■□□□□ 0.03
TMEM50B-201ENST00000420455 TBCKQ8TEA7 893 aa15.23■□□□□ 0.03
TMEM50B-201ENST00000420455 TMEM260Q9NX78 707 aa15.23■□□□□ 0.03
TMEM50B-201ENST00000420455 BIN2Q9UBW5 565 aaPredicted RBP15.23■□□□□ 0.03
TMEM50B-201ENST00000420455 PIK3CDO00329 1044 aa15.23■□□□□ 0.03
TMEM50B-201ENST00000420455 MEIS2O14770 477 aa15.23■□□□□ 0.03
TMEM50B-201ENST00000420455 ATP2B1P20020 1258 aa15.23■□□□□ 0.03
TMEM50B-201ENST00000420455 ZNF165P49910 485 aa15.23■□□□□ 0.03
TMEM50B-201ENST00000420455 RLFQ13129 1914 aa15.23■□□□□ 0.03
TMEM50B-201ENST00000420455 FAM83BQ5T0W9 1011 aa15.23■□□□□ 0.03
TMEM50B-201ENST00000420455 SH3RF1Q7Z6J0 888 aa15.23■□□□□ 0.03
TMEM50B-201ENST00000420455 PSTPIP2Q9H939 334 aa15.23■□□□□ 0.03
TMEM50B-201ENST00000420455 RNF181Q9P0P0 153 aa15.23■□□□□ 0.03
TMEM50B-201ENST00000420455 PCDHA1Q9Y5I3 950 aa15.23■□□□□ 0.03
TMEM50B-201ENST00000420455 SCN4AP35499 1836 aa15.22■□□□□ 0.03
TMEM50B-201ENST00000420455 OPLAHO14841 1288 aa15.22■□□□□ 0.03
TMEM50B-201ENST00000420455 DDNO94850 711 aaPredicted RBP15.22■□□□□ 0.03
TMEM50B-201ENST00000420455 USP49Q70CQ1 688 aa15.22■□□□□ 0.03
TMEM50B-201ENST00000420455 SCYL3Q8IZE3 742 aa15.22■□□□□ 0.03
TMEM50B-201ENST00000420455 SPATA20Q8TB22 786 aa15.22■□□□□ 0.03
TMEM50B-201ENST00000420455 CHURC1Q8WUH1 139 aa15.22■□□□□ 0.03
TMEM50B-201ENST00000420455 MTMR9Q96QG7 549 aa15.22■□□□□ 0.03
TMEM50B-201ENST00000420455 TMEM60Q9H2L4 133 aa15.22■□□□□ 0.03
TMEM50B-201ENST00000420455 GGA3Q9NZ52 723 aa15.22■□□□□ 0.03
TMEM50B-201ENST00000420455 OTOFQ9HC10 1997 aa15.22■□□□□ 0.03
TMEM50B-201ENST00000420455 A0A087X0B3 334 aa15.22■□□□□ 0.03
TMEM50B-201ENST00000420455 TRAF1Q13077 416 aa15.22■□□□□ 0.03
TMEM50B-201ENST00000420455 E2F4Q16254 413 aa15.22■□□□□ 0.03
TMEM50B-201ENST00000420455 STX1AQ16623 288 aa15.22■□□□□ 0.03
TMEM50B-201ENST00000420455 FBXO11Q86XK2 927 aa15.22■□□□□ 0.03
TMEM50B-201ENST00000420455 MBOAT7Q96N66 472 aa15.22■□□□□ 0.03
TMEM50B-201ENST00000420455 AP3B2Q13367 1082 aa15.21■□□□□ 0.03
TMEM50B-201ENST00000420455 C9orf131Q5VYM1 1079 aa15.21■□□□□ 0.03
TMEM50B-201ENST00000420455 SYMPKQ92797 1274 aaKnown RBP15.21■□□□□ 0.03
TMEM50B-201ENST00000420455 KLRG1Q96E93 195 aa15.21■□□□□ 0.03
TMEM50B-201ENST00000420455 SDF4Q9BRK5 362 aa15.21■□□□□ 0.03
TMEM50B-201ENST00000420455 POLR2AP24928 1970 aaKnown RBP15.21■□□□□ 0.03
TMEM50B-201ENST00000420455 RBBP6Q7Z6E9 1792 aaKnown RBP15.21■□□□□ 0.03
TMEM50B-201ENST00000420455 CYP3A7-CYP3A51PA0A087WV96 503 aa15.21■□□□□ 0.03
TMEM50B-201ENST00000420455 WDR46O15213 610 aaKnown RBP15.21■□□□□ 0.03
TMEM50B-201ENST00000420455 CYP3A7P24462 503 aa15.21■□□□□ 0.03
TMEM50B-201ENST00000420455 SARSP49591 514 aaKnown RBP15.21■□□□□ 0.03
TMEM50B-201ENST00000420455 SPECC1Q5M775 1068 aa15.21■□□□□ 0.03
TMEM50B-201ENST00000420455 DHX40Q8IX18 779 aaKnown RBP15.21■□□□□ 0.03
TMEM50B-201ENST00000420455 SPICE1Q8N0Z3 855 aa15.21■□□□□ 0.03
TMEM50B-201ENST00000420455 EPSTI1Q96J88 318 aa15.21■□□□□ 0.03
TMEM50B-201ENST00000420455 BPIFA3Q9BQP9 254 aa15.21■□□□□ 0.03
TMEM50B-201ENST00000420455 JAKMIP3Q5VZ66 844 aa15.2■□□□□ 0.02
TMEM50B-201ENST00000420455 KANK3Q6NY19 840 aa15.2■□□□□ 0.02
TMEM50B-201ENST00000420455 MOXD1Q6UVY6 613 aa15.2■□□□□ 0.02
TMEM50B-201ENST00000420455 PYM1Q9BRP8 204 aaKnown RBP15.2■□□□□ 0.02
TMEM50B-201ENST00000420455 INPP5BP32019 993 aa15.2■□□□□ 0.02
TMEM50B-201ENST00000420455 GHRHRQ02643 423 aa15.2■□□□□ 0.02
TMEM50B-201ENST00000420455 C12orf42Q96LP6 360 aa15.2■□□□□ 0.02
TMEM50B-201ENST00000420455 CCDC39Q9UFE4 941 aa15.2■□□□□ 0.02
TMEM50B-201ENST00000420455 ZKSCAN5Q9Y2L8 839 aa15.2■□□□□ 0.02
TMEM50B-201ENST00000420455 VWA3AA6NCI4 1184 aa15.2■□□□□ 0.02
TMEM50B-201ENST00000420455 POLR2DO15514 142 aaKnown RBP15.2■□□□□ 0.02
TMEM50B-201ENST00000420455 DPCR1Q3MIW9 517 aa15.2■□□□□ 0.02
TMEM50B-201ENST00000420455 AK8Q96MA6 479 aa15.2■□□□□ 0.02
TMEM50B-201ENST00000420455 NAP1L4Q99733 375 aaKnown RBP15.2■□□□□ 0.02
TMEM50B-201ENST00000420455 LOC285556D6RIA3 1793 aa15.19■□□□□ 0.02
TMEM50B-201ENST00000420455 CCNT1O60563 726 aaKnown RBP15.19■□□□□ 0.02
TMEM50B-201ENST00000420455 SLFN14P0C7P3 912 aa15.19■□□□□ 0.02
TMEM50B-201ENST00000420455 USP11P51784 963 aa15.19■□□□□ 0.02
TMEM50B-201ENST00000420455 UBE2SQ16763 222 aa15.19■□□□□ 0.02
TMEM50B-201ENST00000420455 P2RX7Q99572 595 aaKnown RBP15.19■□□□□ 0.02
TMEM50B-201ENST00000420455 CCSER1Q9C0I3 900 aa15.19■□□□□ 0.02
TMEM50B-201ENST00000420455 ANO10Q9NW15 660 aa15.19■□□□□ 0.02
TMEM50B-201ENST00000420455 NEMFO60524 1076 aa15.19■□□□□ 0.02
TMEM50B-201ENST00000420455 OR52Z1P0C646 297 aa15.19■□□□□ 0.02
TMEM50B-201ENST00000420455 GCFC2P16383 781 aaKnown RBP15.19■□□□□ 0.02
TMEM50B-201ENST00000420455 PTPRAP18433 802 aa15.19■□□□□ 0.02
TMEM50B-201ENST00000420455 IGSF22Q8N9C0 903 aa15.19■□□□□ 0.02
TMEM50B-201ENST00000420455 EMILIN3Q9NT22 766 aa15.19■□□□□ 0.02
TMEM50B-201ENST00000420455 NLRP12P59046 1061 aa15.18■□□□□ 0.02
TMEM50B-201ENST00000420455 SUPT20HL1Q3ZLR7 823 aa15.18■□□□□ 0.02
TMEM50B-201ENST00000420455 DTHD1Q6ZMT9 781 aa15.18■□□□□ 0.02
TMEM50B-201ENST00000420455 PLA2G4DQ86XP0 818 aa15.18■□□□□ 0.02
TMEM50B-201ENST00000420455 CNNM3Q8NE01 707 aa15.18■□□□□ 0.02
TMEM50B-201ENST00000420455 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.18■□□□□ 0.02
TMEM50B-201ENST00000420455 SERTAD1Q9UHV2 236 aa15.18■□□□□ 0.02
TMEM50B-201ENST00000420455 RAD21O60216 631 aa15.18■□□□□ 0.02
TMEM50B-201ENST00000420455 LMOD1P29536 600 aaPredicted RBP15.18■□□□□ 0.02
TMEM50B-201ENST00000420455 FXR2P51116 673 aaKnown RBP eCLIP15.18■□□□□ 0.02
TMEM50B-201ENST00000420455 USP14P54578 494 aa15.18■□□□□ 0.02
TMEM50B-201ENST00000420455 LETM2Q2VYF4 491 aa15.18■□□□□ 0.02
TMEM50B-201ENST00000420455 PDXDC2PQ6P474 469 aa15.18■□□□□ 0.02
TMEM50B-201ENST00000420455 CCDC84Q86UT8 332 aaPredicted RBP15.18■□□□□ 0.02
TMEM50B-201ENST00000420455 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.18■□□□□ 0.02
TMEM50B-201ENST00000420455 ZNF536O15090 1300 aa15.18■□□□□ 0.02
TMEM50B-201ENST00000420455 FOSP01100 380 aaPredicted RBP15.18■□□□□ 0.02
TMEM50B-201ENST00000420455 USP50Q70EL3 339 aaPredicted RBP15.18■□□□□ 0.02
TMEM50B-201ENST00000420455 ZC3H15Q8WU90 426 aaKnown RBP15.18■□□□□ 0.02
TMEM50B-201ENST00000420455 PTPRFP10586 1907 aa15.17■□□□□ 0.02
TMEM50B-201ENST00000420455 USP2O75604 605 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms