RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 DENND5AQ6IQ26 1287 aa7.02□□□□□ -1.29
HMGB1P49-201ENST00000418882 OGFOD2Q6N063 350 aa7.02□□□□□ -1.29
HMGB1P49-201ENST00000418882 FRS2Q8WU20 508 aa7.02□□□□□ -1.29
HMGB1P49-201ENST00000418882 INTS4Q96HW7 963 aaKnown RBP7.02□□□□□ -1.29
HMGB1P49-201ENST00000418882 CLEC1BQ9P126 229 aa7.02□□□□□ -1.29
HMGB1P49-201ENST00000418882 LRP2BPQ9P2M1 347 aa7.02□□□□□ -1.29
HMGB1P49-201ENST00000418882 FBLN5Q9UBX5 448 aa7.02□□□□□ -1.29
HMGB1P49-201ENST00000418882 PPP1R1BQ9UD71 204 aaPredicted RBP7.02□□□□□ -1.29
HMGB1P49-201ENST00000418882 A0A1W2PQ45 241 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P49-201ENST00000418882 A0A1W2PQY0 241 aa7.01□□□□□ -1.29
HMGB1P49-201ENST00000418882 PPP1R11O60927 126 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P49-201ENST00000418882 PLS3P13797 630 aa7.01□□□□□ -1.29
HMGB1P49-201ENST00000418882 PPP2R2AP63151 447 aa7.01□□□□□ -1.29
HMGB1P49-201ENST00000418882 MVKQ03426 396 aa7.01□□□□□ -1.29
HMGB1P49-201ENST00000418882 MLANAQ16655 118 aa7.01□□□□□ -1.29
HMGB1P49-201ENST00000418882 NBPF6Q5VWK0 638 aa7.01□□□□□ -1.29
HMGB1P49-201ENST00000418882 POMZP3Q6PJE2 187 aa7.01□□□□□ -1.29
HMGB1P49-201ENST00000418882 CYP2R1Q6VVX0 501 aa7.01□□□□□ -1.29
HMGB1P49-201ENST00000418882 CPNE8Q86YQ8 564 aa7.01□□□□□ -1.29
HMGB1P49-201ENST00000418882 KREMEN2Q8NCW0 462 aa7.01□□□□□ -1.29
HMGB1P49-201ENST00000418882 NPLOC4Q8TAT6 608 aa7.01□□□□□ -1.29
HMGB1P49-201ENST00000418882 PMFBP1Q8TBY8 1022 aa7.01□□□□□ -1.29
HMGB1P49-201ENST00000418882 C1orf159Q96HA4 380 aa7.01□□□□□ -1.29
HMGB1P49-201ENST00000418882 NBPF4Q96M43 638 aa7.01□□□□□ -1.29
HMGB1P49-201ENST00000418882 HIRIP3Q9BW71 556 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P49-201ENST00000418882 CYP26B1Q9NR63 512 aa7.01□□□□□ -1.29
HMGB1P49-201ENST00000418882 ARHGEF4Q9NR80 690 aa7.01□□□□□ -1.29
HMGB1P49-201ENST00000418882 TMEFF2Q9UIK5 374 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P49-201ENST00000418882 ACSL6Q9UKU0 697 aa7.01□□□□□ -1.29
HMGB1P49-201ENST00000418882 TAF6LQ9Y6J9 622 aa7.01□□□□□ -1.29
HMGB1P49-201ENST00000418882 LRRC10BA6NIK2 292 aa7□□□□□ -1.29
HMGB1P49-201ENST00000418882 PAX4O43316 350 aa7□□□□□ -1.29
HMGB1P49-201ENST00000418882 PRKCAP17252 672 aa7□□□□□ -1.29
HMGB1P49-201ENST00000418882 SEPHS1P49903 392 aa7□□□□□ -1.29
HMGB1P49-201ENST00000418882 MESP2Q0VG99 397 aa7□□□□□ -1.29
HMGB1P49-201ENST00000418882 LAPTM5Q13571 262 aa7□□□□□ -1.29
HMGB1P49-201ENST00000418882 INF2Q27J81 1249 aa7□□□□□ -1.29
HMGB1P49-201ENST00000418882 YOD1Q5VVQ6 348 aaPredicted RBP7□□□□□ -1.29
HMGB1P49-201ENST00000418882 MPZL3Q6UWV2 235 aa7□□□□□ -1.29
HMGB1P49-201ENST00000418882 CCDC103Q8IW40 242 aa7□□□□□ -1.29
HMGB1P49-201ENST00000418882 NUP43Q8NFH3 380 aa7□□□□□ -1.29
HMGB1P49-201ENST00000418882 DIRC2Q96SL1 478 aa7□□□□□ -1.29
HMGB1P49-201ENST00000418882 EPN3Q9H201 632 aa7□□□□□ -1.29
HMGB1P49-201ENST00000418882 CWC22Q9HCG8 908 aaKnown RBP7□□□□□ -1.29
HMGB1P49-201ENST00000418882 WTIPA6NIX2 430 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P49-201ENST00000418882 PDPK1O15530 556 aa6.99□□□□□ -1.29
HMGB1P49-201ENST00000418882 DIAPH1O60610 1272 aaKnown RBP6.99□□□□□ -1.29
HMGB1P49-201ENST00000418882 SCG5P05408 212 aa6.99□□□□□ -1.29
HMGB1P49-201ENST00000418882 GFRA1P56159 465 aa6.99□□□□□ -1.29
HMGB1P49-201ENST00000418882 RASGRF1Q13972 1273 aa6.99□□□□□ -1.29
HMGB1P49-201ENST00000418882 SNX17Q15036 470 aa6.99□□□□□ -1.29
HMGB1P49-201ENST00000418882 HLA-DQA1Q5Y7H0 255 aa6.99□□□□□ -1.29
HMGB1P49-201ENST00000418882 GALNT18Q6P9A2 607 aa6.99□□□□□ -1.29
HMGB1P49-201ENST00000418882 CRACR2BQ8N4Y2 399 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P49-201ENST00000418882 TMEM145Q8NBT3 493 aa6.99□□□□□ -1.29
HMGB1P49-201ENST00000418882 ST13P5Q8NFI4 369 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P49-201ENST00000418882 NSUN3Q9H649 340 aaKnown RBP6.99□□□□□ -1.29
HMGB1P49-201ENST00000418882 SNTG2Q9NY99 539 aa6.99□□□□□ -1.29
HMGB1P49-201ENST00000418882 SIRPGQ9P1W8 387 aa6.99□□□□□ -1.29
HMGB1P49-201ENST00000418882 U2SURPO15042 1029 aaKnown RBP6.98□□□□□ -1.29
HMGB1P49-201ENST00000418882 SNRPB2P08579 225 aaKnown RBP6.98□□□□□ -1.29
HMGB1P49-201ENST00000418882 TACR1P25103 407 aa6.98□□□□□ -1.29
HMGB1P49-201ENST00000418882 ECI1P42126 302 aa6.98□□□□□ -1.29
HMGB1P49-201ENST00000418882 ZNF648Q5T619 568 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P49-201ENST00000418882 KSR1Q8IVT5 923 aa6.98□□□□□ -1.29
HMGB1P49-201ENST00000418882 CCDC113Q9H0I3 377 aa6.98□□□□□ -1.29
HMGB1P49-201ENST00000418882 CRTAC1Q9NQ79 661 aa6.98□□□□□ -1.29
HMGB1P49-201ENST00000418882 PFDN2Q9UHV9 154 aa6.98□□□□□ -1.29
HMGB1P49-201ENST00000418882 NPHP3-ACAD11A0A0J9YXS1 232 aa6.97□□□□□ -1.29
HMGB1P49-201ENST00000418882 ADCY3O60266 1144 aa6.97□□□□□ -1.29
HMGB1P49-201ENST00000418882 TBC1D8O95759 1140 aa6.97□□□□□ -1.29
HMGB1P49-201ENST00000418882 PNLIPP16233 465 aa6.97□□□□□ -1.29
HMGB1P49-201ENST00000418882 PAMP19021 973 aa6.97□□□□□ -1.29
HMGB1P49-201ENST00000418882 L1CAMP32004 1257 aa6.97□□□□□ -1.29
HMGB1P49-201ENST00000418882 SLC35F1Q5T1Q4 408 aa6.97□□□□□ -1.29
HMGB1P49-201ENST00000418882 ADGRF1Q5T601 910 aa6.97□□□□□ -1.29
HMGB1P49-201ENST00000418882 JAMLQ86YT9 394 aa6.97□□□□□ -1.29
HMGB1P49-201ENST00000418882 DPF3Q92784 378 aa6.97□□□□□ -1.29
HMGB1P49-201ENST00000418882 DEPDC7Q96QD5 511 aa6.97□□□□□ -1.29
HMGB1P49-201ENST00000418882 IER2Q9BTL4 223 aa6.97□□□□□ -1.29
HMGB1P49-201ENST00000418882 SLC6A17Q9H1V8 727 aa6.97□□□□□ -1.29
HMGB1P49-201ENST00000418882 TNFRSF12AQ9NP84 129 aa6.97□□□□□ -1.29
HMGB1P49-201ENST00000418882 GULP1Q9UBP9 304 aa6.97□□□□□ -1.29
HMGB1P49-201ENST00000418882 FBXL7Q9UJT9 491 aa6.97□□□□□ -1.29
HMGB1P49-201ENST00000418882 MYOCOSA0A1B0GUC4 107 aa6.96□□□□□ -1.3
HMGB1P49-201ENST00000418882 C7orf72A4D263 438 aa6.96□□□□□ -1.3
HMGB1P49-201ENST00000418882 DLX3O60479 287 aa6.96□□□□□ -1.3
HMGB1P49-201ENST00000418882 LCP1P13796 627 aa6.96□□□□□ -1.3
HMGB1P49-201ENST00000418882 HOXC12P31275 282 aa6.96□□□□□ -1.3
HMGB1P49-201ENST00000418882 ERVFRD-1P60508 538 aa6.96□□□□□ -1.3
HMGB1P49-201ENST00000418882 FOXB2Q5VYV0 432 aa6.96□□□□□ -1.3
HMGB1P49-201ENST00000418882 IRF2BP1Q8IU81 584 aa6.96□□□□□ -1.3
HMGB1P49-201ENST00000418882 POU5F2Q8N7G0 328 aa6.96□□□□□ -1.3
HMGB1P49-201ENST00000418882 SGSM3Q96HU1 749 aa6.96□□□□□ -1.3
HMGB1P49-201ENST00000418882 DRC1Q96MC2 740 aa6.96□□□□□ -1.3
HMGB1P49-201ENST00000418882 RWDD3Q9Y3V2 267 aa6.96□□□□□ -1.3
HMGB1P49-201ENST00000418882 PDE6BP35913 854 aa6.95□□□□□ -1.3
HMGB1P49-201ENST00000418882 KCNJ6P48051 423 aa6.95□□□□□ -1.3
HMGB1P49-201ENST00000418882 CYP4F8P98187 520 aa6.95□□□□□ -1.3
HMGB1P49-201ENST00000418882 MTERF2Q49AM1 385 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms