RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 RLFQ13129 1914 aa9.76□□□□□ -0.85
TRIM48-201ENST00000417545 H3BQV1 296 aa9.75□□□□□ -0.85
TRIM48-201ENST00000417545 CYTH3O43739 400 aa9.75□□□□□ -0.85
TRIM48-201ENST00000417545 TLR2O60603 784 aa9.75□□□□□ -0.85
TRIM48-201ENST00000417545 JAK2O60674 1132 aa9.75□□□□□ -0.85
TRIM48-201ENST00000417545 TBC1D8O95759 1140 aa9.75□□□□□ -0.85
TRIM48-201ENST00000417545 CD44P16070 742 aaKnown RBP9.75□□□□□ -0.85
TRIM48-201ENST00000417545 GJB2P29033 226 aa9.75□□□□□ -0.85
TRIM48-201ENST00000417545 NLRP5P59047 1200 aa9.75□□□□□ -0.85
TRIM48-201ENST00000417545 TMEM132BQ14DG7 1078 aa9.75□□□□□ -0.85
TRIM48-201ENST00000417545 PFKFB3Q16875 520 aaPredicted RBP9.75□□□□□ -0.85
TRIM48-201ENST00000417545 TKFCQ3LXA3 575 aa9.75□□□□□ -0.85
TRIM48-201ENST00000417545 IFFO2Q5TF58 517 aa9.75□□□□□ -0.85
TRIM48-201ENST00000417545 PPP1R18Q6NYC8 613 aa9.75□□□□□ -0.85
TRIM48-201ENST00000417545 NSUN7Q8NE18 718 aaKnown RBP9.75□□□□□ -0.85
TRIM48-201ENST00000417545 COA7Q96BR5 231 aa9.75□□□□□ -0.85
TRIM48-201ENST00000417545 C8orf76Q96K31 380 aa9.75□□□□□ -0.85
TRIM48-201ENST00000417545 AGBL1Q96MI9 1066 aa9.75□□□□□ -0.85
TRIM48-201ENST00000417545 SPATC1LQ9H0A9 340 aa9.75□□□□□ -0.85
TRIM48-201ENST00000417545 RNF146Q9NTX7 359 aa9.75□□□□□ -0.85
TRIM48-201ENST00000417545 RNF186Q9NXI6 227 aa9.75□□□□□ -0.85
TRIM48-201ENST00000417545 SAGE1Q9NXZ1 904 aa9.75□□□□□ -0.85
TRIM48-201ENST00000417545 PLXNB2O15031 1838 aa9.75□□□□□ -0.85
TRIM48-201ENST00000417545 PDCP20941 246 aa9.74□□□□□ -0.85
TRIM48-201ENST00000417545 ADCY7P51828 1080 aa9.74□□□□□ -0.85
TRIM48-201ENST00000417545 CUL4AQ13619 759 aa9.74□□□□□ -0.85
TRIM48-201ENST00000417545 ARHGEF6Q15052 776 aa9.74□□□□□ -0.85
TRIM48-201ENST00000417545 SAFBQ15424 915 aaKnown RBP eCLIP9.74□□□□□ -0.85
TRIM48-201ENST00000417545 NTRK3Q16288 839 aa9.74□□□□□ -0.85
TRIM48-201ENST00000417545 NSMFQ6X4W1 530 aa9.74□□□□□ -0.85
TRIM48-201ENST00000417545 MCF2L2Q86YR7 1114 aa9.74□□□□□ -0.85
TRIM48-201ENST00000417545 RIOX2Q8IUF8 465 aa9.74□□□□□ -0.85
TRIM48-201ENST00000417545 ANKRD35Q8N283 1001 aa9.74□□□□□ -0.85
TRIM48-201ENST00000417545 SMARCC2Q8TAQ2 1214 aa9.74□□□□□ -0.85
TRIM48-201ENST00000417545 INTS4Q96HW7 963 aaKnown RBP9.74□□□□□ -0.85
TRIM48-201ENST00000417545 TRERF1Q96PN7 1200 aa9.74□□□□□ -0.85
TRIM48-201ENST00000417545 GLT8D2Q9H1C3 349 aa9.74□□□□□ -0.85
TRIM48-201ENST00000417545 MROH8Q9H579 483 aa9.74□□□□□ -0.85
TRIM48-201ENST00000417545 ACAD9Q9H845 621 aa9.74□□□□□ -0.85
TRIM48-201ENST00000417545 C6orf50Q9HD87 102 aa9.74□□□□□ -0.85
TRIM48-201ENST00000417545 BTBD7Q9P203 1132 aa9.74□□□□□ -0.85
TRIM48-201ENST00000417545 MORF4L1Q9UBU8 362 aa9.74□□□□□ -0.85
TRIM48-201ENST00000417545 VPS37CA5D8V6 355 aaPredicted RBP9.73□□□□□ -0.85
TRIM48-201ENST00000417545 TNPO2O14787 897 aaKnown RBP9.73□□□□□ -0.85
TRIM48-201ENST00000417545 DTNBO60941 627 aa9.73□□□□□ -0.85
TRIM48-201ENST00000417545 CTDNEP1O95476 244 aa9.73□□□□□ -0.85
TRIM48-201ENST00000417545 CFBP00751 764 aa9.73□□□□□ -0.85
TRIM48-201ENST00000417545 CALML3P27482 149 aa9.73□□□□□ -0.85
TRIM48-201ENST00000417545 GNA11P29992 359 aa9.73□□□□□ -0.85
TRIM48-201ENST00000417545 MAPK4P31152 587 aa9.73□□□□□ -0.85
TRIM48-201ENST00000417545 FCGRTP55899 365 aa9.73□□□□□ -0.85
TRIM48-201ENST00000417545 FUT2Q10981 343 aa9.73□□□□□ -0.85
TRIM48-201ENST00000417545 KCTD2Q14681 263 aa9.73□□□□□ -0.85
TRIM48-201ENST00000417545 WWC2Q6AWC2 1192 aa9.73□□□□□ -0.85
TRIM48-201ENST00000417545 CHST13Q8NET6 341 aa9.73□□□□□ -0.85
TRIM48-201ENST00000417545 BICD2Q8TD16 824 aa9.73□□□□□ -0.85
TRIM48-201ENST00000417545 MMP19Q99542 508 aa9.73□□□□□ -0.85
TRIM48-201ENST00000417545 MOV10L1Q9BXT6 1211 aaKnown RBP9.73□□□□□ -0.85
TRIM48-201ENST00000417545 EHMT1Q9H9B1 1298 aa9.73□□□□□ -0.85
TRIM48-201ENST00000417545 TXNRD2Q9NNW7 524 aa9.73□□□□□ -0.85
TRIM48-201ENST00000417545 BARHL2Q9NY43 387 aa9.73□□□□□ -0.85
TRIM48-201ENST00000417545 VPS54Q9P1Q0 977 aa9.73□□□□□ -0.85
TRIM48-201ENST00000417545 RBPJLQ9UBG7 517 aa9.73□□□□□ -0.85
TRIM48-201ENST00000417545 ZNF214Q9UL59 606 aaPredicted RBP9.73□□□□□ -0.85
TRIM48-201ENST00000417545 ADAMTS5Q9UNA0 930 aa9.73□□□□□ -0.85
TRIM48-201ENST00000417545 PFASO15067 1338 aa9.73□□□□□ -0.85
TRIM48-201ENST00000417545 MGAMO43451 1857 aa9.73□□□□□ -0.85
TRIM48-201ENST00000417545 SMCO2A6NFE2 343 aa9.73□□□□□ -0.85
TRIM48-201ENST00000417545 ATP2A1O14983 1001 aa9.73□□□□□ -0.85
TRIM48-201ENST00000417545 PEX10O60683 326 aa9.73□□□□□ -0.85
TRIM48-201ENST00000417545 FCER1AP12319 257 aa9.73□□□□□ -0.85
TRIM48-201ENST00000417545 ERCC3P19447 782 aa9.73□□□□□ -0.85
TRIM48-201ENST00000417545 MRPL12P52815 198 aaKnown RBP9.73□□□□□ -0.85
TRIM48-201ENST00000417545 SP3Q02447 781 aa9.73□□□□□ -0.85
TRIM48-201ENST00000417545 ST3GAL1Q11201 340 aa9.73□□□□□ -0.85
TRIM48-201ENST00000417545 LARP1BQ659C4 914 aaKnown RBP9.73□□□□□ -0.85
TRIM48-201ENST00000417545 MCTP1Q6DN14 999 aa9.73□□□□□ -0.85
TRIM48-201ENST00000417545 SHCBP1Q8NEM2 672 aa9.73□□□□□ -0.85
TRIM48-201ENST00000417545 REPS2Q8NFH8 660 aa9.73□□□□□ -0.85
TRIM48-201ENST00000417545 MTMR8Q96EF0 704 aa9.73□□□□□ -0.85
TRIM48-201ENST00000417545 ERO1AQ96HE7 468 aa9.73□□□□□ -0.85
TRIM48-201ENST00000417545 MPHOSPH6Q99547 160 aaKnown RBP9.73□□□□□ -0.85
TRIM48-201ENST00000417545 SH3GLB2Q9NR46 395 aa9.73□□□□□ -0.85
TRIM48-201ENST00000417545 SLC5A4Q9NY91 659 aa9.73□□□□□ -0.85
TRIM48-201ENST00000417545 SPDYE3A6NKU9 549 aa9.72□□□□□ -0.85
TRIM48-201ENST00000417545 GCOM1H8Y6P7 765 aaPredicted RBP9.72□□□□□ -0.85
TRIM48-201ENST00000417545 GPR25O00155 361 aa9.72□□□□□ -0.85
TRIM48-201ENST00000417545 STXBP3O00186 592 aa9.72□□□□□ -0.85
TRIM48-201ENST00000417545 FKTNO75072 461 aa9.72□□□□□ -0.85
TRIM48-201ENST00000417545 CNMDO75829 334 aa9.72□□□□□ -0.85
TRIM48-201ENST00000417545 POLR2MP0CAP2 368 aa9.72□□□□□ -0.85
TRIM48-201ENST00000417545 BCRP11274 1271 aa9.72□□□□□ -0.85
TRIM48-201ENST00000417545 TAL1P17542 331 aaPredicted RBP9.72□□□□□ -0.85
TRIM48-201ENST00000417545 GUCY1B3Q02153 619 aa9.72□□□□□ -0.85
TRIM48-201ENST00000417545 SLC35G1Q2M3R5 365 aa9.72□□□□□ -0.85
TRIM48-201ENST00000417545 C17orf99Q6UX52 265 aa9.72□□□□□ -0.85
TRIM48-201ENST00000417545 RNF207Q6ZRF8 634 aa9.72□□□□□ -0.85
TRIM48-201ENST00000417545 PLEKHH3Q7Z736 793 aa9.72□□□□□ -0.85
TRIM48-201ENST00000417545 AIFM3Q96NN9 605 aa9.72□□□□□ -0.85
TRIM48-201ENST00000417545 PSTPIP2Q9H939 334 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms