RNA–Protein interactions for RNA: ENST00000417440.2

CASP4-202, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-202ENST00000417440 FAM184BQ9ULE4 1060 aa8.66□□□□□ -1.02
CASP4-202ENST00000417440 ADAMTS5Q9UNA0 930 aa8.66□□□□□ -1.02
CASP4-202ENST00000417440 RIPK3Q9Y572 518 aa8.66□□□□□ -1.02
CASP4-202ENST00000417440 SYNRGQ9UMZ2 1314 aa8.65□□□□□ -1.02
CASP4-202ENST00000417440 MYADML2A6NDP7 307 aa8.65□□□□□ -1.02
CASP4-202ENST00000417440 DCDC2CA8MYV0 355 aa8.65□□□□□ -1.02
CASP4-202ENST00000417440 F5H6K3 240 aa8.65□□□□□ -1.02
CASP4-202ENST00000417440 KIAA0355O15063 1070 aa8.65□□□□□ -1.02
CASP4-202ENST00000417440 ZBED4O75132 1171 aa8.65□□□□□ -1.02
CASP4-202ENST00000417440 SNAI1O95863 264 aaPredicted RBP8.65□□□□□ -1.02
CASP4-202ENST00000417440 NDUFB10O96000 172 aa8.65□□□□□ -1.02
CASP4-202ENST00000417440 APPP05067 770 aa8.65□□□□□ -1.02
CASP4-202ENST00000417440 C6orf222P0C671 652 aaPredicted RBP8.65□□□□□ -1.02
CASP4-202ENST00000417440 CD46P15529 392 aa8.65□□□□□ -1.02
CASP4-202ENST00000417440 KLRC3Q07444 240 aa8.65□□□□□ -1.02
CASP4-202ENST00000417440 FAAP100Q0VG06 881 aa8.65□□□□□ -1.02
CASP4-202ENST00000417440 GRIN2CQ14957 1233 aa8.65□□□□□ -1.02
CASP4-202ENST00000417440 UBE3CQ15386 1083 aa8.65□□□□□ -1.02
CASP4-202ENST00000417440 REPS2Q8NFH8 660 aa8.65□□□□□ -1.02
CASP4-202ENST00000417440 NUP133Q8WUM0 1156 aa8.65□□□□□ -1.02
CASP4-202ENST00000417440 SLF1Q9BQI6 1058 aa8.65□□□□□ -1.02
CASP4-202ENST00000417440 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.65□□□□□ -1.02
CASP4-202ENST00000417440 TEX13BQ9BXU2 312 aa8.65□□□□□ -1.02
CASP4-202ENST00000417440 RAVER2Q9HCJ3 691 aaKnown RBP8.65□□□□□ -1.02
CASP4-202ENST00000417440 HOMER2Q9NSB8 354 aa8.65□□□□□ -1.02
CASP4-202ENST00000417440 ZBTB40Q9NUA8 1239 aa8.65□□□□□ -1.02
CASP4-202ENST00000417440 ARPP21Q9UBL0 812 aaPredicted RBP8.65□□□□□ -1.02
CASP4-202ENST00000417440 NRBP1Q9UHY1 535 aa8.65□□□□□ -1.02
CASP4-202ENST00000417440 DDX19BQ9UMR2 479 aa8.65□□□□□ -1.02
CASP4-202ENST00000417440 DIS3Q9Y2L1 958 aaKnown RBP8.65□□□□□ -1.02
CASP4-202ENST00000417440 EYSQ5T1H1 3165 aa8.65□□□□□ -1.02
CASP4-202ENST00000417440 NAV1Q8NEY1 1877 aa8.65□□□□□ -1.02
CASP4-202ENST00000417440 ZBED9Q6R2W3 1325 aa8.64□□□□□ -1.03
CASP4-202ENST00000417440 ADAMTS4O75173 837 aa8.64□□□□□ -1.03
CASP4-202ENST00000417440 PRDM1O75626 825 aa8.64□□□□□ -1.03
CASP4-202ENST00000417440 RASA1P20936 1047 aa8.64□□□□□ -1.03
CASP4-202ENST00000417440 COPB2P35606 906 aa8.64□□□□□ -1.03
CASP4-202ENST00000417440 TDO2P48775 406 aa8.64□□□□□ -1.03
CASP4-202ENST00000417440 ACVR2BQ13705 512 aa8.64□□□□□ -1.03
CASP4-202ENST00000417440 TSHZ3Q63HK5 1081 aa8.64□□□□□ -1.03
CASP4-202ENST00000417440 CCDC129Q6ZRS4 1044 aa8.64□□□□□ -1.03
CASP4-202ENST00000417440 NOL8Q76FK4 1167 aaKnown RBP8.64□□□□□ -1.03
CASP4-202ENST00000417440 ZNF444Q8N0Y2 327 aaPredicted RBP8.64□□□□□ -1.03
CASP4-202ENST00000417440 LRRC47Q8N1G4 583 aaKnown RBP8.64□□□□□ -1.03
CASP4-202ENST00000417440 ANKRD35Q8N283 1001 aa8.64□□□□□ -1.03
CASP4-202ENST00000417440 PRPF38AQ8NAV1 312 aaKnown RBP8.64□□□□□ -1.03
CASP4-202ENST00000417440 GLT1D1Q96MS3 346 aa8.64□□□□□ -1.03
CASP4-202ENST00000417440 STRBPQ96SI9 672 aaKnown RBP8.64□□□□□ -1.03
CASP4-202ENST00000417440 TSEN34Q9BSV6 310 aaKnown RBP8.64□□□□□ -1.03
CASP4-202ENST00000417440 PPP1R12CQ9BZL4 782 aa8.64□□□□□ -1.03
CASP4-202ENST00000417440 LRRCC1Q9C099 1032 aa8.64□□□□□ -1.03
CASP4-202ENST00000417440 FRMPD3Q5JV73 1810 aa8.64□□□□□ -1.03
CASP4-202ENST00000417440 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.63□□□□□ -1.03
CASP4-202ENST00000417440 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.63□□□□□ -1.03
CASP4-202ENST00000417440 MOXD2PA6NHM9 499 aa8.63□□□□□ -1.03
CASP4-202ENST00000417440 GSG1L2A8MUP6 293 aa8.63□□□□□ -1.03
CASP4-202ENST00000417440 GRXCR1A8MXD5 290 aa8.63□□□□□ -1.03
CASP4-202ENST00000417440 TIMP1P01033 207 aa8.63□□□□□ -1.03
CASP4-202ENST00000417440 ASGR1P07306 291 aa8.63□□□□□ -1.03
CASP4-202ENST00000417440 ACRP10323 421 aa8.63□□□□□ -1.03
CASP4-202ENST00000417440 IKQ13123 557 aaPredicted RBP8.63□□□□□ -1.03
CASP4-202ENST00000417440 GNASQ5JWF2 1037 aa8.63□□□□□ -1.03
CASP4-202ENST00000417440 SWT1Q5T5J6 900 aaKnown RBP8.63□□□□□ -1.03
CASP4-202ENST00000417440 ANKRD33Q7Z3H0 272 aa8.63□□□□□ -1.03
CASP4-202ENST00000417440 OSBP2Q969R2 916 aa8.63□□□□□ -1.03
CASP4-202ENST00000417440 TIFAQ96CG3 184 aa8.63□□□□□ -1.03
CASP4-202ENST00000417440 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.63□□□□□ -1.03
CASP4-202ENST00000417440 KRTAP3-3Q9BYR6 98 aa8.63□□□□□ -1.03
CASP4-202ENST00000417440 KRTAP3-2Q9BYR7 98 aa8.63□□□□□ -1.03
CASP4-202ENST00000417440 ZNF576Q9H609 170 aa8.63□□□□□ -1.03
CASP4-202ENST00000417440 SPC25Q9HBM1 224 aa8.63□□□□□ -1.03
CASP4-202ENST00000417440 ECHDC1Q9NTX5 307 aa8.63□□□□□ -1.03
CASP4-202ENST00000417440 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.63□□□□□ -1.03
CASP4-202ENST00000417440 NYAP2Q9P242 653 aa8.63□□□□□ -1.03
CASP4-202ENST00000417440 ZNF236Q9UL36 1845 aa8.63□□□□□ -1.03
CASP4-202ENST00000417440 SYNGAP1Q96PV0 1343 aa8.62□□□□□ -1.03
CASP4-202ENST00000417440 DDX11L8A8MPP1 907 aa8.62□□□□□ -1.03
CASP4-202ENST00000417440 ADCY6O43306 1168 aa8.62□□□□□ -1.03
CASP4-202ENST00000417440 DUSP11O75319 330 aaKnown RBP8.62□□□□□ -1.03
CASP4-202ENST00000417440 CSF2RAP15509 400 aa8.62□□□□□ -1.03
CASP4-202ENST00000417440 SNAP25P60880 206 aa8.62□□□□□ -1.03
CASP4-202ENST00000417440 BEX3Q00994 111 aa8.62□□□□□ -1.03
CASP4-202ENST00000417440 CNTN2Q02246 1040 aa8.62□□□□□ -1.03
CASP4-202ENST00000417440 CCDC144BQ3MJ40 725 aa8.62□□□□□ -1.03
CASP4-202ENST00000417440 SBK1Q52WX2 424 aa8.62□□□□□ -1.03
CASP4-202ENST00000417440 SLFN13Q68D06 897 aa8.62□□□□□ -1.03
CASP4-202ENST00000417440 CCSAPQ6IQ19 270 aaPredicted RBP8.62□□□□□ -1.03
CASP4-202ENST00000417440 MFSD5Q6N075 450 aa8.62□□□□□ -1.03
CASP4-202ENST00000417440 MSL3Q8N5Y2 521 aaKnown RBP8.62□□□□□ -1.03
CASP4-202ENST00000417440 USP38Q8NB14 1042 aa8.62□□□□□ -1.03
CASP4-202ENST00000417440 KLHDC9Q8NEP7 349 aa8.62□□□□□ -1.03
CASP4-202ENST00000417440 CEP95Q96GE4 821 aa8.62□□□□□ -1.03
CASP4-202ENST00000417440 ZFRQ96KR1 1074 aaKnown RBP8.62□□□□□ -1.03
CASP4-202ENST00000417440 TOX2Q96NM4 488 aa8.62□□□□□ -1.03
CASP4-202ENST00000417440 PRDM6Q9NQX0 595 aa8.62□□□□□ -1.03
CASP4-202ENST00000417440 FEM1BQ9UK73 627 aa8.62□□□□□ -1.03
CASP4-202ENST00000417440 MTMR7Q9Y216 660 aa8.62□□□□□ -1.03
CASP4-202ENST00000417440 GTF3C3Q9Y5Q9 886 aa8.62□□□□□ -1.03
CASP4-202ENST00000417440 DDX49Q9Y6V7 483 aaKnown RBP8.62□□□□□ -1.03
CASP4-202ENST00000417440 LTBP2Q14767 1821 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms