RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 STARD7Q9NQZ5 370 aa29.77■■■□□ 2.36
VEGFA-208ENST00000417285 ELP1O95163 1332 aa29.76■■■□□ 2.36
VEGFA-208ENST00000417285 C6orf222P0C671 652 aaPredicted RBP29.76■■■□□ 2.35
VEGFA-208ENST00000417285 ANKRD33Q7Z3H0 272 aa29.76■■■□□ 2.35
VEGFA-208ENST00000417285 TRIM43BA6NCK2 446 aa29.75■■■□□ 2.35
VEGFA-208ENST00000417285 CLTBP09497 229 aa29.75■■■□□ 2.35
VEGFA-208ENST00000417285 SNHG28P0DPA3 235 aa29.75■■■□□ 2.35
VEGFA-208ENST00000417285 PDE4AP27815 886 aa29.75■■■□□ 2.35
VEGFA-208ENST00000417285 NKX3-2P78367 333 aa29.75■■■□□ 2.35
VEGFA-208ENST00000417285 TNFAIP2Q03169 654 aa29.75■■■□□ 2.35
VEGFA-208ENST00000417285 ZNF543Q08ER8 600 aa29.75■■■□□ 2.35
VEGFA-208ENST00000417285 GNASQ5JWF2 1037 aa29.75■■■□□ 2.35
VEGFA-208ENST00000417285 NSMFQ6X4W1 530 aa29.75■■■□□ 2.35
VEGFA-208ENST00000417285 IQCA1Q86XH1 822 aa29.75■■■□□ 2.35
VEGFA-208ENST00000417285 BADQ92934 168 aa29.75■■■□□ 2.35
VEGFA-208ENST00000417285 TRIM43Q96BQ3 446 aaPredicted RBP29.75■■■□□ 2.35
VEGFA-208ENST00000417285 GLT1D1Q96MS3 346 aa29.75■■■□□ 2.35
VEGFA-208ENST00000417285 FRMPD2Q68DX3 1309 aaPredicted RBP29.74■■■□□ 2.35
VEGFA-208ENST00000417285 DCDC2CA8MYV0 355 aa29.74■■■□□ 2.35
VEGFA-208ENST00000417285 IMMTQ16891 758 aaKnown RBP29.74■■■□□ 2.35
VEGFA-208ENST00000417285 GPATCH4Q5T3I0 446 aaKnown RBP29.74■■■□□ 2.35
VEGFA-208ENST00000417285 SH3RF1Q7Z6J0 888 aa29.74■■■□□ 2.35
VEGFA-208ENST00000417285 DEFB123Q8N688 67 aa29.74■■■□□ 2.35
VEGFA-208ENST00000417285 ADD3Q9UEY8 706 aaKnown RBP29.74■■■□□ 2.35
VEGFA-208ENST00000417285 LOC102724159A0A0B4J2E5 919 aa29.73■■■□□ 2.35
VEGFA-208ENST00000417285 KIAA0355O15063 1070 aa29.73■■■□□ 2.35
VEGFA-208ENST00000417285 PQBP1O60828 265 aaKnown RBP29.73■■■□□ 2.35
VEGFA-208ENST00000417285 PWP2Q15269 919 aaKnown RBP29.73■■■□□ 2.35
VEGFA-208ENST00000417285 TTC22Q5TAA0 569 aa29.73■■■□□ 2.35
VEGFA-208ENST00000417285 IQSEC1Q6DN90 963 aa29.73■■■□□ 2.35
VEGFA-208ENST00000417285 NOL8Q76FK4 1167 aaKnown RBP29.73■■■□□ 2.35
VEGFA-208ENST00000417285 ANKS1AQ92625 1134 aa29.73■■■□□ 2.35
VEGFA-208ENST00000417285 ADCY6O43306 1168 aa29.72■■■□□ 2.35
VEGFA-208ENST00000417285 ASGR1P07306 291 aa29.72■■■□□ 2.35
VEGFA-208ENST00000417285 VTI1AQ96AJ9 217 aa29.72■■■□□ 2.35
VEGFA-208ENST00000417285 TMEM39AQ9NV64 488 aa29.72■■■□□ 2.35
VEGFA-208ENST00000417285 NEDD4P46934 1319 aa29.71■■■□□ 2.35
VEGFA-208ENST00000417285 KDM4AO75164 1064 aa29.71■■■□□ 2.35
VEGFA-208ENST00000417285 BAATQ14032 418 aaPredicted RBP29.71■■■□□ 2.35
VEGFA-208ENST00000417285 MORC4Q8TE76 937 aa29.71■■■□□ 2.35
VEGFA-208ENST00000417285 ZKSCAN3Q9BRR0 538 aa29.71■■■□□ 2.35
VEGFA-208ENST00000417285 KRT23Q9C075 422 aa29.71■■■□□ 2.35
VEGFA-208ENST00000417285 MROH7Q68CQ1 1323 aa29.71■■■□□ 2.35
VEGFA-208ENST00000417285 MYADML2A6NDP7 307 aa29.7■■■□□ 2.35
VEGFA-208ENST00000417285 GSPT1P15170 499 aaKnown RBP29.7■■■□□ 2.35
VEGFA-208ENST00000417285 RAG1P15918 1043 aa29.7■■■□□ 2.35
VEGFA-208ENST00000417285 CNNM2Q9H8M5 875 aa29.7■■■□□ 2.35
VEGFA-208ENST00000417285 VTA1Q9NP79 307 aa29.7■■■□□ 2.35
VEGFA-208ENST00000417285 Q9Y3F1 56 aa29.7■■■□□ 2.35
VEGFA-208ENST00000417285 LAMA2P24043 3122 aaKnown RBP29.7■■■□□ 2.34
VEGFA-208ENST00000417285 CDK7P50613 346 aa29.69■■■□□ 2.34
VEGFA-208ENST00000417285 FAAP100Q0VG06 881 aa29.69■■■□□ 2.34
VEGFA-208ENST00000417285 ZSCAN10Q96SZ4 725 aaPredicted RBP29.69■■■□□ 2.34
VEGFA-208ENST00000417285 AP5M1Q9H0R1 490 aa29.69■■■□□ 2.34
VEGFA-208ENST00000417285 KAT14Q9H8E8 782 aa29.69■■■□□ 2.34
VEGFA-208ENST00000417285 ZSWIM5Q9P217 1185 aa29.69■■■□□ 2.34
VEGFA-208ENST00000417285 GNEQ9Y223 722 aaKnown RBP29.69■■■□□ 2.34
VEGFA-208ENST00000417285 ASTN1O14525 1302 aa29.69■■■□□ 2.34
VEGFA-208ENST00000417285 WDR19Q8NEZ3 1342 aa29.69■■■□□ 2.34
VEGFA-208ENST00000417285 CABYRO75952 493 aa29.68■■■□□ 2.34
VEGFA-208ENST00000417285 SHHQ15465 462 aa29.68■■■□□ 2.34
VEGFA-208ENST00000417285 FAM109BQ6ICB4 259 aaPredicted RBP29.68■■■□□ 2.34
VEGFA-208ENST00000417285 PNMA1Q8ND90 353 aa29.68■■■□□ 2.34
VEGFA-208ENST00000417285 A0A0U1RQG5 324 aaPredicted RBP29.67■■■□□ 2.34
VEGFA-208ENST00000417285 PTPDC1A2A3K4 754 aa29.67■■■□□ 2.34
VEGFA-208ENST00000417285 ARVCFO00192 962 aa29.67■■■□□ 2.34
VEGFA-208ENST00000417285 NFIBO00712 420 aa29.67■■■□□ 2.34
VEGFA-208ENST00000417285 CTAGE5O15320 804 aa29.67■■■□□ 2.34
VEGFA-208ENST00000417285 ZEB2O60315 1214 aa29.67■■■□□ 2.34
VEGFA-208ENST00000417285 TAPT1Q6NXT6 567 aa29.67■■■□□ 2.34
VEGFA-208ENST00000417285 CLEC4DQ8WXI8 215 aa29.67■■■□□ 2.34
VEGFA-208ENST00000417285 MPHOSPH6Q99547 160 aaKnown RBP29.67■■■□□ 2.34
VEGFA-208ENST00000417285 MAF1Q9H063 256 aa29.67■■■□□ 2.34
VEGFA-208ENST00000417285 C11orf97A0A1B0GVM6 126 aaPredicted RBP29.66■■■□□ 2.34
VEGFA-208ENST00000417285 B4E1Z4 1266 aa29.66■■■□□ 2.34
VEGFA-208ENST00000417285 SMPD1P17405 629 aa29.66■■■□□ 2.34
VEGFA-208ENST00000417285 IRX5P78411 483 aaPredicted RBP29.66■■■□□ 2.34
VEGFA-208ENST00000417285 RNF207Q6ZRF8 634 aa29.66■■■□□ 2.34
VEGFA-208ENST00000417285 RGS22Q8NE09 1264 aa29.66■■■□□ 2.34
VEGFA-208ENST00000417285 RUFY2Q8WXA3 655 aa29.66■■■□□ 2.34
VEGFA-208ENST00000417285 SEZ6LQ9BYH1 1024 aa29.66■■■□□ 2.34
VEGFA-208ENST00000417285 RAD50Q92878 1312 aa29.66■■■□□ 2.34
VEGFA-208ENST00000417285 LAMA4Q16363 1823 aa29.66■■■□□ 2.34
VEGFA-208ENST00000417285 DYNC1LI2O43237 492 aaPredicted RBP29.65■■■□□ 2.34
VEGFA-208ENST00000417285 GOLGA8HP0CJ92 632 aa29.65■■■□□ 2.34
VEGFA-208ENST00000417285 FSCN1Q16658 493 aaKnown RBP29.65■■■□□ 2.34
VEGFA-208ENST00000417285 KIAA1211Q6ZU35 1233 aa29.65■■■□□ 2.34
VEGFA-208ENST00000417285 EEPD1Q7L9B9 569 aa29.65■■■□□ 2.34
VEGFA-208ENST00000417285 TLK2Q86UE8 772 aa29.65■■■□□ 2.34
VEGFA-208ENST00000417285 PURBQ96QR8 312 aaKnown RBP29.65■■■□□ 2.34
VEGFA-208ENST00000417285 PDGFCQ9NRA1 345 aa29.65■■■□□ 2.34
VEGFA-208ENST00000417285 MTMR10Q9NXD2 777 aa29.65■■■□□ 2.34
VEGFA-208ENST00000417285 B4DLN1 442 aa29.64■■■□□ 2.34
VEGFA-208ENST00000417285 ITGB8P26012 769 aa29.64■■■□□ 2.34
VEGFA-208ENST00000417285 ALDH5A1P51649 535 aaPredicted RBP29.64■■■□□ 2.34
VEGFA-208ENST00000417285 MRPL12P52815 198 aaKnown RBP29.64■■■□□ 2.34
VEGFA-208ENST00000417285 Q7L0L9 218 aa29.64■■■□□ 2.34
VEGFA-208ENST00000417285 ENAHQ8N8S7 591 aaPredicted RBP29.64■■■□□ 2.34
VEGFA-208ENST00000417285 UBAC1Q9BSL1 405 aa29.64■■■□□ 2.34
VEGFA-208ENST00000417285 MCM3APO60318 1980 aa29.64■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms