RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 PFASO15067 1338 aa26.79■■□□□ 1.88
SMARCB1-205ENST00000417137 ABCB11O95342 1321 aa26.79■■□□□ 1.88
SMARCB1-205ENST00000417137 PNMA6FA0A0J9YX94 578 aa26.78■■□□□ 1.88
SMARCB1-205ENST00000417137 GOLGA8AA7E2F4 631 aa26.78■■□□□ 1.88
SMARCB1-205ENST00000417137 GOLGA8BA8MQT2 603 aa26.78■■□□□ 1.88
SMARCB1-205ENST00000417137 INHAP05111 366 aa26.78■■□□□ 1.88
SMARCB1-205ENST00000417137 PGK2P07205 417 aa26.78■■□□□ 1.88
SMARCB1-205ENST00000417137 USH1GQ495M9 461 aa26.78■■□□□ 1.88
SMARCB1-205ENST00000417137 MUM1L1Q5H9M0 696 aa26.78■■□□□ 1.88
SMARCB1-205ENST00000417137 OLFML2BQ68BL8 750 aa26.78■■□□□ 1.88
SMARCB1-205ENST00000417137 HOMER1Q86YM7 354 aa26.78■■□□□ 1.88
SMARCB1-205ENST00000417137 TRIB2Q92519 343 aa26.78■■□□□ 1.88
SMARCB1-205ENST00000417137 PIGSQ96S52 555 aa26.78■■□□□ 1.88
SMARCB1-205ENST00000417137 MAF1Q9H063 256 aa26.78■■□□□ 1.88
SMARCB1-205ENST00000417137 PCDH10Q9P2E7 1040 aa26.78■■□□□ 1.88
SMARCB1-205ENST00000417137 MRPL11Q9Y3B7 192 aaKnown RBP26.78■■□□□ 1.88
SMARCB1-205ENST00000417137 DOCK3Q8IZD9 2030 aa26.78■■□□□ 1.88
SMARCB1-205ENST00000417137 CYTH3O43739 400 aa26.77■■□□□ 1.88
SMARCB1-205ENST00000417137 METAP2P50579 478 aaKnown RBP eCLIP26.77■■□□□ 1.88
SMARCB1-205ENST00000417137 EVCP57679 992 aa26.77■■□□□ 1.88
SMARCB1-205ENST00000417137 CCL14Q16627 93 aa26.77■■□□□ 1.88
SMARCB1-205ENST00000417137 ZNF792Q3KQV3 632 aa26.77■■□□□ 1.88
SMARCB1-205ENST00000417137 NSMFQ6X4W1 530 aa26.77■■□□□ 1.88
SMARCB1-205ENST00000417137 TMTC3Q6ZXV5 915 aa26.77■■□□□ 1.88
SMARCB1-205ENST00000417137 SRBD1Q8N5C6 995 aaKnown RBP26.77■■□□□ 1.88
SMARCB1-205ENST00000417137 TMEM106CQ9BVX2 250 aa26.77■■□□□ 1.88
SMARCB1-205ENST00000417137 C22orf23Q9BZE7 217 aa26.77■■□□□ 1.88
SMARCB1-205ENST00000417137 ALDH8A1Q9H2A2 487 aaPredicted RBP26.77■■□□□ 1.88
SMARCB1-205ENST00000417137 A1CFQ9NQ94 594 aaKnown RBP26.77■■□□□ 1.88
SMARCB1-205ENST00000417137 SEC63Q9UGP8 760 aaKnown RBP26.77■■□□□ 1.88
SMARCB1-205ENST00000417137 DNAJC25-GNG10A0A024R161 153 aa26.76■■□□□ 1.87
SMARCB1-205ENST00000417137 POTEB2H3BUK9 544 aa26.76■■□□□ 1.87
SMARCB1-205ENST00000417137 PLEKHA8P1O95397 391 aa26.76■■□□□ 1.87
SMARCB1-205ENST00000417137 SOX10P56693 466 aa26.76■■□□□ 1.87
SMARCB1-205ENST00000417137 ANKRD1Q15327 319 aa26.76■■□□□ 1.87
SMARCB1-205ENST00000417137 MAML3Q96JK9 1138 aa26.76■■□□□ 1.87
SMARCB1-205ENST00000417137 TOB2Q14106 344 aaPredicted RBP26.75■■□□□ 1.87
SMARCB1-205ENST00000417137 SLC35G1Q2M3R5 365 aa26.75■■□□□ 1.87
SMARCB1-205ENST00000417137 MCF2L2Q86YR7 1114 aa26.75■■□□□ 1.87
SMARCB1-205ENST00000417137 RGS22Q8NE09 1264 aa26.75■■□□□ 1.87
SMARCB1-205ENST00000417137 CLEC4DQ8WXI8 215 aa26.75■■□□□ 1.87
SMARCB1-205ENST00000417137 CYP39A1Q9NYL5 469 aa26.75■■□□□ 1.87
SMARCB1-205ENST00000417137 PCDHA1Q9Y5I3 950 aa26.75■■□□□ 1.87
SMARCB1-205ENST00000417137 TNRC18O15417 2968 aaPredicted RBP26.74■■□□□ 1.87
SMARCB1-205ENST00000417137 MSL3Q8N5Y2 521 aaKnown RBP26.74■■□□□ 1.87
SMARCB1-205ENST00000417137 PIBF1Q8WXW3 757 aa26.74■■□□□ 1.87
SMARCB1-205ENST00000417137 ZNF274Q96GC6 653 aaPredicted RBP26.74■■□□□ 1.87
SMARCB1-205ENST00000417137 FLRT1Q9NZU1 646 aa26.74■■□□□ 1.87
SMARCB1-205ENST00000417137 PLXNB2O15031 1838 aa26.74■■□□□ 1.87
SMARCB1-205ENST00000417137 PTPDC1A2A3K4 754 aa26.73■■□□□ 1.87
SMARCB1-205ENST00000417137 NFIBO00712 420 aa26.73■■□□□ 1.87
SMARCB1-205ENST00000417137 MYCP01106 439 aaPredicted RBP26.73■■□□□ 1.87
SMARCB1-205ENST00000417137 TAL1P17542 331 aaPredicted RBP26.73■■□□□ 1.87
SMARCB1-205ENST00000417137 PDIA3P30101 505 aaKnown RBP26.73■■□□□ 1.87
SMARCB1-205ENST00000417137 RNF207Q6ZRF8 634 aa26.73■■□□□ 1.87
SMARCB1-205ENST00000417137 ZNF467Q7Z7K2 595 aaPredicted RBP26.73■■□□□ 1.87
SMARCB1-205ENST00000417137 CMTR1Q8N1G2 835 aaKnown RBP26.73■■□□□ 1.87
SMARCB1-205ENST00000417137 CCDC82Q8N4S0 544 aa26.73■■□□□ 1.87
SMARCB1-205ENST00000417137 HMX1Q9NP08 348 aaPredicted RBP26.73■■□□□ 1.87
SMARCB1-205ENST00000417137 ZNF236Q9UL36 1845 aa26.73■■□□□ 1.87
SMARCB1-205ENST00000417137 RPTORQ8N122 1335 aa26.72■■□□□ 1.87
SMARCB1-205ENST00000417137 CCL5P13501 91 aa26.72■■□□□ 1.87
SMARCB1-205ENST00000417137 RBM25P49756 843 aaKnown RBP26.72■■□□□ 1.87
SMARCB1-205ENST00000417137 NEK4P51957 841 aa26.72■■□□□ 1.87
SMARCB1-205ENST00000417137 BAATQ14032 418 aaPredicted RBP26.72■■□□□ 1.87
SMARCB1-205ENST00000417137 RNF208Q9H0X6 261 aa26.72■■□□□ 1.87
SMARCB1-205ENST00000417137 PRKAR2AP13861 404 aaKnown RBP26.71■■□□□ 1.87
SMARCB1-205ENST00000417137 CDC27P30260 824 aa26.71■■□□□ 1.87
SMARCB1-205ENST00000417137 CACNB2Q08289 660 aaPredicted RBP26.71■■□□□ 1.87
SMARCB1-205ENST00000417137 MTFR1Q15390 333 aa26.71■■□□□ 1.87
SMARCB1-205ENST00000417137 SAMD3Q8N6K7 520 aa26.71■■□□□ 1.87
SMARCB1-205ENST00000417137 FAM133AQ8N9E0 248 aa26.71■■□□□ 1.87
SMARCB1-205ENST00000417137 TINF2Q9BSI4 451 aa26.71■■□□□ 1.87
SMARCB1-205ENST00000417137 FAM217BQ9NTX9 383 aaPredicted RBP26.71■■□□□ 1.87
SMARCB1-205ENST00000417137 ADD3Q9UEY8 706 aaKnown RBP26.71■■□□□ 1.87
SMARCB1-205ENST00000417137 PDE4DIPQ5VU43 2346 aa26.7■■□□□ 1.86
SMARCB1-205ENST00000417137 PPP1R11O60927 126 aaPredicted RBP26.7■■□□□ 1.86
SMARCB1-205ENST00000417137 CYP2C19P33261 490 aa26.7■■□□□ 1.86
SMARCB1-205ENST00000417137 ADD1P35611 737 aaKnown RBP26.7■■□□□ 1.86
SMARCB1-205ENST00000417137 CNTN2Q02246 1040 aa26.7■■□□□ 1.86
SMARCB1-205ENST00000417137 TRIM32Q13049 653 aa26.7■■□□□ 1.86
SMARCB1-205ENST00000417137 MAP3K21Q5TCX8 1036 aa26.7■■□□□ 1.86
SMARCB1-205ENST00000417137 UNC93B1Q9H1C4 597 aa26.7■■□□□ 1.86
SMARCB1-205ENST00000417137 MAP3K20Q9NYL2 800 aaKnown RBP26.7■■□□□ 1.86
SMARCB1-205ENST00000417137 NID2Q14112 1375 aa26.7■■□□□ 1.86
SMARCB1-205ENST00000417137 IGHA2P01877 340 aa26.69■■□□□ 1.86
SMARCB1-205ENST00000417137 CALML3P27482 149 aa26.69■■□□□ 1.86
SMARCB1-205ENST00000417137 RPS6P62753 249 aaKnown RBP26.69■■□□□ 1.86
SMARCB1-205ENST00000417137 MAMDC4Q6UXC1 1216 aa26.69■■□□□ 1.86
SMARCB1-205ENST00000417137 NRBP1Q9UHY1 535 aa26.69■■□□□ 1.86
SMARCB1-205ENST00000417137 SYNGAP1Q96PV0 1343 aa26.68■■□□□ 1.86
SMARCB1-205ENST00000417137 ASB14A6NK59 587 aa26.68■■□□□ 1.86
SMARCB1-205ENST00000417137 MPHOSPH6Q99547 160 aaKnown RBP26.68■■□□□ 1.86
SMARCB1-205ENST00000417137 LARP6Q9BRS8 491 aaKnown RBP26.68■■□□□ 1.86
SMARCB1-205ENST00000417137 RBM27Q9P2N5 1060 aaKnown RBP26.68■■□□□ 1.86
SMARCB1-205ENST00000417137 CNPY2Q9Y2B0 182 aa26.68■■□□□ 1.86
SMARCB1-205ENST00000417137 V9GY48 417 aaPredicted RBP26.68■■□□□ 1.86
SMARCB1-205ENST00000417137 B4DLN1 442 aa26.67■■□□□ 1.86
SMARCB1-205ENST00000417137 GJB1P08034 283 aa26.67■■□□□ 1.86
SMARCB1-205ENST00000417137 CAPN2P17655 700 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms