RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 NSMFQ6X4W1 530 aa17.03■□□□□ 0.32
PAF1-202ENST00000416728 CYP39A1Q9NYL5 469 aa17.03■□□□□ 0.32
PAF1-202ENST00000416728 ASTN1O14525 1302 aa17.02■□□□□ 0.32
PAF1-202ENST00000416728 CTAGE5O15320 804 aa17.02■□□□□ 0.32
PAF1-202ENST00000416728 TLR3O15455 904 aaKnown RBP17.02■□□□□ 0.32
PAF1-202ENST00000416728 ICAM1P05362 532 aa17.02■□□□□ 0.32
PAF1-202ENST00000416728 TOP1P11387 765 aaKnown RBP17.02■□□□□ 0.32
PAF1-202ENST00000416728 BEX3Q00994 111 aa17.02■□□□□ 0.32
PAF1-202ENST00000416728 TLK2Q86UE8 772 aa17.02■□□□□ 0.32
PAF1-202ENST00000416728 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.02■□□□□ 0.32
PAF1-202ENST00000416728 TMEM47Q9BQJ4 181 aa17.02■□□□□ 0.32
PAF1-202ENST00000416728 LNPKQ9C0E8 428 aa17.02■□□□□ 0.32
PAF1-202ENST00000416728 AP5M1Q9H0R1 490 aa17.02■□□□□ 0.32
PAF1-202ENST00000416728 RANBP17Q9H2T7 1088 aaKnown RBP17.02■□□□□ 0.32
PAF1-202ENST00000416728 TTYH1Q9H313 450 aaPredicted RBP17.02■□□□□ 0.32
PAF1-202ENST00000416728 GNEQ9Y223 722 aaKnown RBP17.02■□□□□ 0.32
PAF1-202ENST00000416728 ZMYM6O95789 1325 aa17.02■□□□□ 0.31
PAF1-202ENST00000416728 TRIM6-TRIM34B2RNG4 842 aa17.02■□□□□ 0.31
PAF1-202ENST00000416728 HSPD1P10809 573 aaKnown RBP17.02■□□□□ 0.31
PAF1-202ENST00000416728 SLC16A2P36021 539 aa17.02■□□□□ 0.31
PAF1-202ENST00000416728 NMIQ13287 307 aaPredicted RBP17.02■□□□□ 0.31
PAF1-202ENST00000416728 SYDE2Q5VT97 1194 aa17.02■□□□□ 0.31
PAF1-202ENST00000416728 TTBK2Q6IQ55 1244 aa17.02■□□□□ 0.31
PAF1-202ENST00000416728 MFSD5Q6N075 450 aa17.02■□□□□ 0.31
PAF1-202ENST00000416728 CXCL17Q6UXB2 119 aa17.02■□□□□ 0.31
PAF1-202ENST00000416728 BTNL9Q6UXG8 535 aa17.02■□□□□ 0.31
PAF1-202ENST00000416728 EEPD1Q7L9B9 569 aa17.02■□□□□ 0.31
PAF1-202ENST00000416728 ZNF589Q86UQ0 364 aaPredicted RBP17.02■□□□□ 0.31
PAF1-202ENST00000416728 FAM126BQ8IXS8 530 aa17.02■□□□□ 0.31
PAF1-202ENST00000416728 TCP11L1Q9NUJ3 509 aa17.02■□□□□ 0.31
PAF1-202ENST00000416728 DDX49Q9Y6V7 483 aaKnown RBP17.02■□□□□ 0.31
PAF1-202ENST00000416728 FRMPD2Q68DX3 1309 aaPredicted RBP17.01■□□□□ 0.31
PAF1-202ENST00000416728 CCDC171Q6TFL3 1326 aa17.01■□□□□ 0.31
PAF1-202ENST00000416728 TMEM265A0A087WTH1 108 aa17.01■□□□□ 0.31
PAF1-202ENST00000416728 CABYRO75952 493 aa17.01■□□□□ 0.31
PAF1-202ENST00000416728 HAND2P61296 217 aa17.01■□□□□ 0.31
PAF1-202ENST00000416728 PPIGQ13427 754 aaKnown RBP eCLIP17.01■□□□□ 0.315e-7■□□□□ 8.2
PAF1-202ENST00000416728 FSCN1Q16658 493 aaKnown RBP17.01■□□□□ 0.31
PAF1-202ENST00000416728 FBXO16Q8IX29 292 aaPredicted RBP17.01■□□□□ 0.31
PAF1-202ENST00000416728 GPCPD1Q9NPB8 672 aa17.01■□□□□ 0.31
PAF1-202ENST00000416728 ADD3Q9UEY8 706 aaKnown RBP17.01■□□□□ 0.31
PAF1-202ENST00000416728 HSFX4A0A1B0GTS1 333 aaPredicted RBP17■□□□□ 0.31
PAF1-202ENST00000416728 HSFX3A0A1B0GWH4 333 aaPredicted RBP17■□□□□ 0.31
PAF1-202ENST00000416728 DYNC1LI2O43237 492 aaPredicted RBP17■□□□□ 0.31
PAF1-202ENST00000416728 ZEB2O60315 1214 aa17■□□□□ 0.31
PAF1-202ENST00000416728 PCP11498 1178 aaKnown RBP17■□□□□ 0.31
PAF1-202ENST00000416728 SMPD1P17405 629 aa17■□□□□ 0.31
PAF1-202ENST00000416728 AAMPQ13685 434 aa17■□□□□ 0.31
PAF1-202ENST00000416728 IQSEC1Q6DN90 963 aa17■□□□□ 0.31
PAF1-202ENST00000416728 TMEM199Q8N511 208 aa17■□□□□ 0.31
PAF1-202ENST00000416728 MAFAQ8NHW3 353 aaPredicted RBP17■□□□□ 0.31
PAF1-202ENST00000416728 MYLIPQ8WY64 445 aa17■□□□□ 0.31
PAF1-202ENST00000416728 RILPL2Q969X0 211 aa17■□□□□ 0.31
PAF1-202ENST00000416728 PURBQ96QR8 312 aaKnown RBP17■□□□□ 0.31
PAF1-202ENST00000416728 BUD13Q9BRD0 619 aaKnown RBP eCLIP17■□□□□ 0.31
PAF1-202ENST00000416728 PPP1R12CQ9BZL4 782 aa17■□□□□ 0.31
PAF1-202ENST00000416728 VTA1Q9NP79 307 aa17■□□□□ 0.31
PAF1-202ENST00000416728 PDGFCQ9NRA1 345 aa17■□□□□ 0.31
PAF1-202ENST00000416728 LAMA2P24043 3122 aaKnown RBP16.99■□□□□ 0.31
PAF1-202ENST00000416728 MCM3APO60318 1980 aa16.99■□□□□ 0.31
PAF1-202ENST00000416728 PDHBP11177 359 aa16.99■□□□□ 0.31
PAF1-202ENST00000416728 CSF2RAP15509 400 aa16.99■□□□□ 0.31
PAF1-202ENST00000416728 MFAP1P55081 439 aaKnown RBP16.99■□□□□ 0.31
PAF1-202ENST00000416728 BAATQ14032 418 aaPredicted RBP16.99■□□□□ 0.31
PAF1-202ENST00000416728 AKNAD1Q5T1N1 836 aa16.99■□□□□ 0.31
PAF1-202ENST00000416728 TAPT1Q6NXT6 567 aa16.99■□□□□ 0.31
PAF1-202ENST00000416728 MFSD6Q6ZSS7 791 aa16.99■□□□□ 0.31
PAF1-202ENST00000416728 MORC4Q8TE76 937 aa16.99■□□□□ 0.31
PAF1-202ENST00000416728 PNMA2Q9UL42 364 aa16.99■□□□□ 0.31
PAF1-202ENST00000416728 Q9Y3F1 56 aa16.99■□□□□ 0.31
PAF1-202ENST00000416728 PTPDC1A2A3K4 754 aa16.98■□□□□ 0.31
PAF1-202ENST00000416728 NFIBO00712 420 aa16.98■□□□□ 0.31
PAF1-202ENST00000416728 CD4P01730 458 aa16.98■□□□□ 0.31
PAF1-202ENST00000416728 FOSL2P15408 326 aa16.98■□□□□ 0.31
PAF1-202ENST00000416728 PTGS1P23219 599 aa16.98■□□□□ 0.31
PAF1-202ENST00000416728 DNAJB2P25686 324 aa16.98■□□□□ 0.31
PAF1-202ENST00000416728 ITGA7Q13683 1181 aa16.98■□□□□ 0.31
PAF1-202ENST00000416728 KIAA1211Q6ZU35 1233 aa16.98■□□□□ 0.31
PAF1-202ENST00000416728 SMC5Q8IY18 1101 aa16.98■□□□□ 0.31
PAF1-202ENST00000416728 SLC43A3Q8NBI5 491 aa16.98■□□□□ 0.31
PAF1-202ENST00000416728 TTC14Q96N46 770 aa16.98■□□□□ 0.31
PAF1-202ENST00000416728 RNF41Q9H4P4 317 aaPredicted RBP16.98■□□□□ 0.31
PAF1-202ENST00000416728 ALDH5A1P51649 535 aaPredicted RBP16.97■□□□□ 0.31
PAF1-202ENST00000416728 ZNF543Q08ER8 600 aa16.97■□□□□ 0.31
PAF1-202ENST00000416728 TMEM240Q5SV17 173 aa16.97■□□□□ 0.31
PAF1-202ENST00000416728 B4GALNT3Q6L9W6 998 aa16.97■□□□□ 0.31
PAF1-202ENST00000416728 PSRC1Q6PGN9 363 aaPredicted RBP16.97■□□□□ 0.31
PAF1-202ENST00000416728 C16orf59Q7L2K0 433 aa16.97■□□□□ 0.31
PAF1-202ENST00000416728 TBC1D10CQ8IV04 446 aa16.97■□□□□ 0.31
PAF1-202ENST00000416728 SEZ6LQ9BYH1 1024 aa16.97■□□□□ 0.31
PAF1-202ENST00000416728 RWDD1Q9H446 243 aaPredicted RBP16.97■□□□□ 0.31
PAF1-202ENST00000416728 A0A0C4DFX4 3053 aa16.97■□□□□ 0.31
PAF1-202ENST00000416728 LOC102724159A0A0B4J2E5 919 aa16.96■□□□□ 0.31
PAF1-202ENST00000416728 ACRP10323 421 aa16.96■□□□□ 0.31
PAF1-202ENST00000416728 SDSP20132 328 aa16.96■□□□□ 0.31
PAF1-202ENST00000416728 CALML3P27482 149 aa16.96■□□□□ 0.31
PAF1-202ENST00000416728 CYP2C18P33260 490 aa16.96■□□□□ 0.31
PAF1-202ENST00000416728 PWP2Q15269 919 aaKnown RBP16.96■□□□□ 0.31
PAF1-202ENST00000416728 DUSP28Q4G0W2 176 aa16.96■□□□□ 0.31
PAF1-202ENST00000416728 TMEM63BQ5T3F8 832 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms