RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 SUCOQ9UBS9 1254 aaKnown RBP3.6□□□□□ -1.83
CTDSPL-203ENST00000416688 CCDC39Q9UFE4 941 aa3.6□□□□□ -1.83
CTDSPL-203ENST00000416688 FOXD3Q9UJU5 478 aaPredicted RBP3.6□□□□□ -1.83
CTDSPL-203ENST00000416688 SLC13A4Q9UKG4 626 aa3.6□□□□□ -1.83
CTDSPL-203ENST00000416688 PTPN22Q9Y2R2 807 aa3.6□□□□□ -1.83
CTDSPL-203ENST00000416688 GPR52Q9Y2T5 361 aa3.6□□□□□ -1.83
CTDSPL-203ENST00000416688 A0A1W2PQH9 124 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 SERTM1A2A2V5 107 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 A6NHS1 94 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 LRRC10BA6NIK2 292 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 FAM25EA8MYX2 175 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 B4E1Z4 1266 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 RASA4BC9J798 803 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 H0Y3Z8 333 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 NEMP1O14524 444 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 TPP1O14773 563 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 FYB1O15117 783 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 RASA4O43374 803 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 RRP9O43818 475 aaKnown RBP3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 KIF1CO43896 1103 aaKnown RBP3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 PQBP1O60828 265 aaKnown RBP3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 EFCAB14O75071 495 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 TBCAO75347 108 aaKnown RBP3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 OFD1O75665 1012 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 APBA3O96018 575 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 HRGP04196 525 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 APOA4P06727 396 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 NAT2P11245 290 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 BPIP17213 487 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 XBP1P17861 261 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 NAT1P18440 290 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 XPAP23025 273 aaPredicted RBP3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 AKAP5P24588 427 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 PDE6CP51160 858 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 SMTNP53814 917 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 HIRAP54198 1017 aaPredicted RBP3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 USP14P54578 494 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 FCGRTP55899 365 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 SUMO1P63165 101 aaKnown RBP3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 GABREP78334 506 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 SKOR1P84550 965 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 ICA1Q05084 483 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 MOGSQ13724 837 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 BLMHQ13867 455 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 GALEQ14376 348 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 PCBP1Q15365 356 aaKnown RBP eCLIP3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 PROX2Q3B8N5 592 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 CFAP100Q494V2 611 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 CCDC38Q502W7 563 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 SLC27A3Q5K4L6 730 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 DGKKQ5KSL6 1271 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 TBCELQ5QJ74 424 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 ARMC4Q5T2S8 1044 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 IFIT1BQ5T764 474 aaKnown RBP3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 MRM1Q6IN84 353 aaKnown RBP3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 PLBD1Q6P4A8 553 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 VHLLQ6RSH7 139 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 POTEAQ6S8J7 498 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 DTHD1Q6ZMT9 781 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 RNF19BQ6ZMZ0 732 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 GK5Q6ZS86 529 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 NYAP1Q6ZVC0 841 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 NEK10Q6ZWH5 1172 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 PDZD4Q76G19 769 aaPredicted RBP3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 MCM10Q7L590 875 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 RASGRP2Q7LDG7 609 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 TTC6Q86TZ1 520 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 ANKLE2Q86XL3 938 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 ALDH16A1Q8IZ83 802 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 MPNDQ8N594 471 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 PCYOX1LQ8NBM8 494 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 MNS1Q8NEH6 495 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 SLC30A5Q8TAD4 765 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 GSDMBQ8TAX9 411 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 SLC35G2Q8TBE7 412 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 SPATA18Q8TC71 538 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 MGARPQ8TDB4 240 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 ATP2A3Q93084 1043 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 EXOC2Q96KP1 924 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 BARD1Q99728 777 aaKnown RBP3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 ADPGKQ9BRR6 497 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 POLR3CQ9BUI4 534 aaPredicted RBP3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 MIR1-1HGQ9H1L0 117 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 EHD4Q9H223 541 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 SUDS3Q9H7L9 328 aaPredicted RBP3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 BRD9Q9H8M2 597 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 ZNF277Q9NRM2 450 aaPredicted RBP3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 ATP8A2Q9NTI2 1148 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 ABCF3Q9NUQ8 709 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 CTNNA3Q9UI47 895 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 RABGEF1Q9UJ41 708 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 AGTPBP1Q9UPW5 1226 aa3.59□□□□□ -1.83
CTDSPL-203ENST00000416688 FSD2A1L4K1 749 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 B4E171 279 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 F5H0A9 414 aaPredicted RBP3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 CDK2AP1O14519 115 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 KHNYNO15037 678 aaKnown RBP3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 SUSD5O60279 629 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 KPNA6O60684 536 aa3.58□□□□□ -1.84
CTDSPL-203ENST00000416688 USO1O60763 962 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms