RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 ZNF543Q08ER8 600 aa17.79■□□□□ 0.44
UBXN4-203ENST00000416538 ACVR2BQ13705 512 aa17.79■□□□□ 0.44
UBXN4-203ENST00000416538 CCDC144BQ3MJ40 725 aa17.79■□□□□ 0.44
UBXN4-203ENST00000416538 KLHDC9Q8NEP7 349 aa17.79■□□□□ 0.44
UBXN4-203ENST00000416538 DSCC1Q9BVC3 393 aa17.79■□□□□ 0.44
UBXN4-203ENST00000416538 UBE2OQ9C0C9 1292 aaKnown RBP17.79■□□□□ 0.44
UBXN4-203ENST00000416538 CYP39A1Q9NYL5 469 aa17.79■□□□□ 0.44
UBXN4-203ENST00000416538 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.78■□□□□ 0.44
UBXN4-203ENST00000416538 KDM4AO75164 1064 aa17.78■□□□□ 0.44
UBXN4-203ENST00000416538 TKFCQ3LXA3 575 aa17.78■□□□□ 0.44
UBXN4-203ENST00000416538 TDHQ8IZJ6 230 aa17.78■□□□□ 0.44
UBXN4-203ENST00000416538 BAZ2BQ9UIF8 2168 aaKnown RBP17.78■□□□□ 0.44
UBXN4-203ENST00000416538 KIAA1217Q5T5P2 1943 aa17.77■□□□□ 0.44
UBXN4-203ENST00000416538 HIP1O00291 1037 aa17.77■□□□□ 0.44
UBXN4-203ENST00000416538 ZNF213O14771 459 aa17.77■□□□□ 0.44
UBXN4-203ENST00000416538 GOLGA8HP0CJ92 632 aa17.77■□□□□ 0.44
UBXN4-203ENST00000416538 ITGB8P26012 769 aa17.77■□□□□ 0.44
UBXN4-203ENST00000416538 TMEM63BQ5T3F8 832 aa17.77■□□□□ 0.44
UBXN4-203ENST00000416538 C1orf53Q5VUE5 145 aa17.77■□□□□ 0.44
UBXN4-203ENST00000416538 RNF180Q86T96 592 aa17.77■□□□□ 0.44
UBXN4-203ENST00000416538 ESR2Q92731 530 aa17.77■□□□□ 0.44
UBXN4-203ENST00000416538 UPF3AQ9H1J1 476 aaKnown RBP17.77■□□□□ 0.44
UBXN4-203ENST00000416538 ABHD16BQ9H3Z7 469 aa17.77■□□□□ 0.44
UBXN4-203ENST00000416538 RNF41Q9H4P4 317 aaPredicted RBP17.77■□□□□ 0.44
UBXN4-203ENST00000416538 FAM184BQ9ULE4 1060 aa17.77■□□□□ 0.44
UBXN4-203ENST00000416538 TAF6LQ9Y6J9 622 aa17.77■□□□□ 0.44
UBXN4-203ENST00000416538 TRIM43BA6NCK2 446 aa17.76■□□□□ 0.43
UBXN4-203ENST00000416538 DUSP11O75319 330 aaKnown RBP17.76■□□□□ 0.43
UBXN4-203ENST00000416538 CST5P28325 142 aaPredicted RBP17.76■□□□□ 0.43
UBXN4-203ENST00000416538 ACLYP53396 1101 aa17.76■□□□□ 0.43
UBXN4-203ENST00000416538 TLE2Q04725 743 aa17.76■□□□□ 0.43
UBXN4-203ENST00000416538 NSMFQ6X4W1 530 aa17.76■□□□□ 0.43
UBXN4-203ENST00000416538 SLC30A10Q6XR72 485 aa17.76■□□□□ 0.43
UBXN4-203ENST00000416538 FBXO16Q8IX29 292 aaPredicted RBP17.76■□□□□ 0.43
UBXN4-203ENST00000416538 ENAHQ8N8S7 591 aaPredicted RBP17.76■□□□□ 0.43
UBXN4-203ENST00000416538 CLEC4DQ8WXI8 215 aa17.76■□□□□ 0.43
UBXN4-203ENST00000416538 TRIM43Q96BQ3 446 aaPredicted RBP17.76■□□□□ 0.43
UBXN4-203ENST00000416538 TTC14Q96N46 770 aa17.76■□□□□ 0.43
UBXN4-203ENST00000416538 PRDM5Q9NQX1 630 aaPredicted RBP17.76■□□□□ 0.43
UBXN4-203ENST00000416538 PDGFCQ9NRA1 345 aa17.75■□□□□ 0.43
UBXN4-203ENST00000416538 TNKSO95271 1327 aa17.74■□□□□ 0.43
UBXN4-203ENST00000416538 RAD50Q92878 1312 aa17.74■□□□□ 0.43
UBXN4-203ENST00000416538 C6orf222P0C671 652 aaPredicted RBP17.74■□□□□ 0.43
UBXN4-203ENST00000416538 CHMLP26374 656 aa17.74■□□□□ 0.43
UBXN4-203ENST00000416538 GJA9P57773 515 aa17.74■□□□□ 0.43
UBXN4-203ENST00000416538 PTH1RQ03431 593 aa17.74■□□□□ 0.43
UBXN4-203ENST00000416538 BAATQ14032 418 aaPredicted RBP17.74■□□□□ 0.43
UBXN4-203ENST00000416538 KCNA10Q16322 511 aa17.74■□□□□ 0.43
UBXN4-203ENST00000416538 LRIT3Q3SXY7 679 aa17.74■□□□□ 0.43
UBXN4-203ENST00000416538 DGKHQ86XP1 1220 aa17.74■□□□□ 0.43
UBXN4-203ENST00000416538 PNMA1Q8ND90 353 aa17.74■□□□□ 0.43
UBXN4-203ENST00000416538 MORC4Q8TE76 937 aa17.74■□□□□ 0.43
UBXN4-203ENST00000416538 ZSWIM5Q9P217 1185 aa17.74■□□□□ 0.43
UBXN4-203ENST00000416538 GNEQ9Y223 722 aaKnown RBP17.74■□□□□ 0.43
UBXN4-203ENST00000416538 WDR19Q8NEZ3 1342 aa17.73■□□□□ 0.43
UBXN4-203ENST00000416538 BEX3Q00994 111 aa17.73■□□□□ 0.43
UBXN4-203ENST00000416538 IMMTQ16891 758 aaKnown RBP17.73■□□□□ 0.43
UBXN4-203ENST00000416538 C9orf50Q5SZB4 431 aa17.73■□□□□ 0.43
UBXN4-203ENST00000416538 TAPT1Q6NXT6 567 aa17.73■□□□□ 0.43
UBXN4-203ENST00000416538 CYB5R4Q7L1T6 521 aa17.73■□□□□ 0.43
UBXN4-203ENST00000416538 EEPD1Q7L9B9 569 aa17.73■□□□□ 0.43
UBXN4-203ENST00000416538 ANKS1AQ92625 1134 aa17.73■□□□□ 0.43
UBXN4-203ENST00000416538 BADQ92934 168 aa17.73■□□□□ 0.43
UBXN4-203ENST00000416538 ZSCAN10Q96SZ4 725 aaPredicted RBP17.73■□□□□ 0.43
UBXN4-203ENST00000416538 TSEN34Q9BSV6 310 aaKnown RBP17.73■□□□□ 0.43
UBXN4-203ENST00000416538 UBA5Q9GZZ9 404 aa17.73■□□□□ 0.43
UBXN4-203ENST00000416538 SCN10AQ9Y5Y9 1956 aa17.73■□□□□ 0.43
UBXN4-203ENST00000416538 MOXD2PA6NHM9 499 aa17.72■□□□□ 0.43
UBXN4-203ENST00000416538 PQBP1O60828 265 aaKnown RBP17.72■□□□□ 0.43
UBXN4-203ENST00000416538 SMPD1P17405 629 aa17.72■□□□□ 0.43
UBXN4-203ENST00000416538 ALDH5A1P51649 535 aaPredicted RBP17.72■□□□□ 0.43
UBXN4-203ENST00000416538 NKX3-2P78367 333 aa17.72■□□□□ 0.43
UBXN4-203ENST00000416538 SEC23AQ15436 765 aa17.72■□□□□ 0.43
UBXN4-203ENST00000416538 Q7L0L9 218 aa17.72■□□□□ 0.43
UBXN4-203ENST00000416538 SKAP1Q86WV1 359 aa17.72■□□□□ 0.43
UBXN4-203ENST00000416538 STARD7Q9NQZ5 370 aa17.72■□□□□ 0.43
UBXN4-203ENST00000416538 LAMA2P24043 3122 aaKnown RBP17.72■□□□□ 0.43
UBXN4-203ENST00000416538 ASB14A6NK59 587 aa17.71■□□□□ 0.43
UBXN4-203ENST00000416538 ASGR1P07306 291 aa17.71■□□□□ 0.43
UBXN4-203ENST00000416538 CYP21A2P08686 494 aa17.71■□□□□ 0.43
UBXN4-203ENST00000416538 CLTBP09497 229 aa17.71■□□□□ 0.43
UBXN4-203ENST00000416538 EPHB4P54760 987 aa17.71■□□□□ 0.43
UBXN4-203ENST00000416538 TNFAIP2Q03169 654 aa17.71■□□□□ 0.43
UBXN4-203ENST00000416538 FAAP100Q0VG06 881 aa17.71■□□□□ 0.43
UBXN4-203ENST00000416538 SLC35G1Q2M3R5 365 aa17.71■□□□□ 0.43
UBXN4-203ENST00000416538 STOX1Q6ZVD7 989 aa17.71■□□□□ 0.43
UBXN4-203ENST00000416538 TLK2Q86UE8 772 aa17.71■□□□□ 0.43
UBXN4-203ENST00000416538 IQCA1Q86XH1 822 aa17.71■□□□□ 0.43
UBXN4-203ENST00000416538 LBHD1Q9BQE6 289 aaPredicted RBP17.71■□□□□ 0.43
UBXN4-203ENST00000416538 GBF1Q92538 1859 aa17.71■□□□□ 0.43
UBXN4-203ENST00000416538 RPS6P62753 249 aaKnown RBP17.7■□□□□ 0.42
UBXN4-203ENST00000416538 CDC37Q16543 378 aaPredicted RBP17.7■□□□□ 0.42
UBXN4-203ENST00000416538 USH1GQ495M9 461 aa17.7■□□□□ 0.42
UBXN4-203ENST00000416538 GPATCH4Q5T3I0 446 aaKnown RBP17.7■□□□□ 0.42
UBXN4-203ENST00000416538 ANKRD33Q7Z3H0 272 aa17.7■□□□□ 0.42
UBXN4-203ENST00000416538 KAT14Q9H8E8 782 aa17.7■□□□□ 0.42
UBXN4-203ENST00000416538 SENP2Q9HC62 589 aa17.7■□□□□ 0.42
UBXN4-203ENST00000416538 PRKAG2Q9UGJ0 569 aa17.7■□□□□ 0.42
UBXN4-203ENST00000416538 CTNNA3Q9UI47 895 aa17.7■□□□□ 0.42
UBXN4-203ENST00000416538 MYH7BA7E2Y1 1941 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms