RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 STARD7Q9NQZ5 370 aa20.67■□□□□ 0.9
PDLIM2-208ENST00000416159 NEDD4P46934 1319 aa20.67■□□□□ 0.9
PDLIM2-208ENST00000416159 SNHG28P0DPA3 235 aa20.66■□□□□ 0.9
PDLIM2-208ENST00000416159 ZNF543Q08ER8 600 aa20.66■□□□□ 0.9
PDLIM2-208ENST00000416159 IMMTQ16891 758 aaKnown RBP20.66■□□□□ 0.9
PDLIM2-208ENST00000416159 TRIM43BA6NCK2 446 aa20.65■□□□□ 0.9
PDLIM2-208ENST00000416159 ADCY6O43306 1168 aa20.65■□□□□ 0.9
PDLIM2-208ENST00000416159 CLTBP09497 229 aa20.65■□□□□ 0.9
PDLIM2-208ENST00000416159 GPATCH4Q5T3I0 446 aaKnown RBP20.65■□□□□ 0.9
PDLIM2-208ENST00000416159 SH3RF1Q7Z6J0 888 aa20.65■□□□□ 0.9
PDLIM2-208ENST00000416159 TRIM43Q96BQ3 446 aaPredicted RBP20.65■□□□□ 0.9
PDLIM2-208ENST00000416159 GLT1D1Q96MS3 346 aa20.65■□□□□ 0.9
PDLIM2-208ENST00000416159 TOX2Q96NM4 488 aa20.65■□□□□ 0.9
PDLIM2-208ENST00000416159 ZKSCAN3Q9BRR0 538 aa20.65■□□□□ 0.9
PDLIM2-208ENST00000416159 ELP1O95163 1332 aa20.64■□□□□ 0.89
PDLIM2-208ENST00000416159 MYADML2A6NDP7 307 aa20.64■□□□□ 0.89
PDLIM2-208ENST00000416159 KDM4AO75164 1064 aa20.64■□□□□ 0.89
PDLIM2-208ENST00000416159 PDE4AP27815 886 aa20.64■□□□□ 0.89
PDLIM2-208ENST00000416159 NKX3-2P78367 333 aa20.64■□□□□ 0.89
PDLIM2-208ENST00000416159 TNFAIP2Q03169 654 aa20.64■□□□□ 0.89
PDLIM2-208ENST00000416159 GNASQ5JWF2 1037 aa20.64■□□□□ 0.89
PDLIM2-208ENST00000416159 TTC22Q5TAA0 569 aa20.64■□□□□ 0.89
PDLIM2-208ENST00000416159 NOL8Q76FK4 1167 aaKnown RBP20.64■□□□□ 0.89
PDLIM2-208ENST00000416159 ANKS1AQ92625 1134 aa20.64■□□□□ 0.89
PDLIM2-208ENST00000416159 BADQ92934 168 aa20.64■□□□□ 0.89
PDLIM2-208ENST00000416159 ADD3Q9UEY8 706 aaKnown RBP20.64■□□□□ 0.89
PDLIM2-208ENST00000416159 LTBP2Q14767 1821 aa20.64■□□□□ 0.89
PDLIM2-208ENST00000416159 LAMA4Q16363 1823 aa20.63■□□□□ 0.89
PDLIM2-208ENST00000416159 DCDC2CA8MYV0 355 aa20.63■□□□□ 0.89
PDLIM2-208ENST00000416159 B4E1Z4 1266 aa20.63■□□□□ 0.89
PDLIM2-208ENST00000416159 PQBP1O60828 265 aaKnown RBP20.63■□□□□ 0.89
PDLIM2-208ENST00000416159 ASGR1P07306 291 aa20.63■□□□□ 0.89
PDLIM2-208ENST00000416159 BAATQ14032 418 aaPredicted RBP20.63■□□□□ 0.89
PDLIM2-208ENST00000416159 IQSEC1Q6DN90 963 aa20.63■□□□□ 0.89
PDLIM2-208ENST00000416159 ANKRD33Q7Z3H0 272 aa20.63■□□□□ 0.89
PDLIM2-208ENST00000416159 MORC4Q8TE76 937 aa20.63■□□□□ 0.89
PDLIM2-208ENST00000416159 KRT23Q9C075 422 aa20.63■□□□□ 0.89
PDLIM2-208ENST00000416159 KAT14Q9H8E8 782 aa20.63■□□□□ 0.89
PDLIM2-208ENST00000416159 ASTN1O14525 1302 aa20.62■□□□□ 0.89
PDLIM2-208ENST00000416159 WDR19Q8NEZ3 1342 aa20.62■□□□□ 0.89
PDLIM2-208ENST00000416159 LOC102724159A0A0B4J2E5 919 aa20.62■□□□□ 0.89
PDLIM2-208ENST00000416159 KIAA0355O15063 1070 aa20.62■□□□□ 0.89
PDLIM2-208ENST00000416159 PWP2Q15269 919 aaKnown RBP20.62■□□□□ 0.89
PDLIM2-208ENST00000416159 PNMA1Q8ND90 353 aa20.62■□□□□ 0.89
PDLIM2-208ENST00000416159 VTI1AQ96AJ9 217 aa20.62■□□□□ 0.89
PDLIM2-208ENST00000416159 ZSCAN10Q96SZ4 725 aaPredicted RBP20.62■□□□□ 0.89
PDLIM2-208ENST00000416159 CNNM2Q9H8M5 875 aa20.62■□□□□ 0.89
PDLIM2-208ENST00000416159 VTA1Q9NP79 307 aa20.62■□□□□ 0.89
PDLIM2-208ENST00000416159 TMEM39AQ9NV64 488 aa20.62■□□□□ 0.89
PDLIM2-208ENST00000416159 ZSWIM5Q9P217 1185 aa20.62■□□□□ 0.89
PDLIM2-208ENST00000416159 GNEQ9Y223 722 aaKnown RBP20.62■□□□□ 0.89
PDLIM2-208ENST00000416159 MROH7Q68CQ1 1323 aa20.61■□□□□ 0.89
PDLIM2-208ENST00000416159 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.61■□□□□ 0.89
PDLIM2-208ENST00000416159 PTPDC1A2A3K4 754 aa20.61■□□□□ 0.89
PDLIM2-208ENST00000416159 NFIBO00712 420 aa20.61■□□□□ 0.89
PDLIM2-208ENST00000416159 GSPT1P15170 499 aaKnown RBP20.61■□□□□ 0.89
PDLIM2-208ENST00000416159 RAG1P15918 1043 aa20.61■□□□□ 0.89
PDLIM2-208ENST00000416159 IRX5P78411 483 aaPredicted RBP20.61■□□□□ 0.89
PDLIM2-208ENST00000416159 DEFB123Q8N688 67 aa20.61■□□□□ 0.89
PDLIM2-208ENST00000416159 RUFY2Q8WXA3 655 aa20.61■□□□□ 0.89
PDLIM2-208ENST00000416159 CLEC4DQ8WXI8 215 aa20.61■□□□□ 0.89
PDLIM2-208ENST00000416159 Q9Y3F1 56 aa20.61■□□□□ 0.89
PDLIM2-208ENST00000416159 DNAH12Q6ZR08 3092 aa20.61■□□□□ 0.89
PDLIM2-208ENST00000416159 RAD50Q92878 1312 aa20.6■□□□□ 0.89
PDLIM2-208ENST00000416159 A0A0U1RQG5 324 aaPredicted RBP20.6■□□□□ 0.89
PDLIM2-208ENST00000416159 CTAGE5O15320 804 aa20.6■□□□□ 0.89
PDLIM2-208ENST00000416159 GOLGA8HP0CJ92 632 aa20.6■□□□□ 0.89
PDLIM2-208ENST00000416159 CDK7P50613 346 aa20.6■□□□□ 0.89
PDLIM2-208ENST00000416159 ALDH5A1P51649 535 aaPredicted RBP20.6■□□□□ 0.89
PDLIM2-208ENST00000416159 FAAP100Q0VG06 881 aa20.6■□□□□ 0.89
PDLIM2-208ENST00000416159 SHHQ15465 462 aa20.6■□□□□ 0.89
PDLIM2-208ENST00000416159 TAPT1Q6NXT6 567 aa20.6■□□□□ 0.89
PDLIM2-208ENST00000416159 RNF207Q6ZRF8 634 aa20.6■□□□□ 0.89
PDLIM2-208ENST00000416159 EEPD1Q7L9B9 569 aa20.6■□□□□ 0.89
PDLIM2-208ENST00000416159 PURBQ96QR8 312 aaKnown RBP20.6■□□□□ 0.89
PDLIM2-208ENST00000416159 AP5M1Q9H0R1 490 aa20.6■□□□□ 0.89
PDLIM2-208ENST00000416159 ARVCFO00192 962 aa20.59■□□□□ 0.89
PDLIM2-208ENST00000416159 DYNC1LI2O43237 492 aaPredicted RBP20.59■□□□□ 0.89
PDLIM2-208ENST00000416159 ZEB2O60315 1214 aa20.59■□□□□ 0.89
PDLIM2-208ENST00000416159 CABYRO75952 493 aa20.59■□□□□ 0.89
PDLIM2-208ENST00000416159 SMPD1P17405 629 aa20.59■□□□□ 0.89
PDLIM2-208ENST00000416159 IRX6P78412 446 aaPredicted RBP20.59■□□□□ 0.89
PDLIM2-208ENST00000416159 KIAA1211Q6ZU35 1233 aa20.59■□□□□ 0.89
PDLIM2-208ENST00000416159 TLK2Q86UE8 772 aa20.59■□□□□ 0.89
PDLIM2-208ENST00000416159 FBXO16Q8IX29 292 aaPredicted RBP20.59■□□□□ 0.89
PDLIM2-208ENST00000416159 ENAHQ8N8S7 591 aaPredicted RBP20.59■□□□□ 0.89
PDLIM2-208ENST00000416159 MPHOSPH6Q99547 160 aaKnown RBP20.59■□□□□ 0.89
PDLIM2-208ENST00000416159 UBA5Q9GZZ9 404 aa20.59■□□□□ 0.89
PDLIM2-208ENST00000416159 PDGFCQ9NRA1 345 aa20.59■□□□□ 0.89
PDLIM2-208ENST00000416159 DDX49Q9Y6V7 483 aaKnown RBP20.59■□□□□ 0.89
PDLIM2-208ENST00000416159 SZT2Q5T011 3432 aa20.59■□□□□ 0.89
PDLIM2-208ENST00000416159 LCTP09848 1927 aa20.59■□□□□ 0.89
PDLIM2-208ENST00000416159 ITGB8P26012 769 aa20.58■□□□□ 0.89
PDLIM2-208ENST00000416159 CALML3P27482 149 aa20.58■□□□□ 0.89
PDLIM2-208ENST00000416159 BEX3Q00994 111 aa20.58■□□□□ 0.89
PDLIM2-208ENST00000416159 ASPRV1Q53RT3 343 aa20.58■□□□□ 0.89
PDLIM2-208ENST00000416159 C9orf50Q5SZB4 431 aa20.58■□□□□ 0.89
PDLIM2-208ENST00000416159 RGS22Q8NE09 1264 aa20.58■□□□□ 0.89
PDLIM2-208ENST00000416159 UBAC1Q9BSL1 405 aa20.58■□□□□ 0.89
PDLIM2-208ENST00000416159 MAF1Q9H063 256 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms