RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 CYP4F8P98187 520 aa4.28□□□□□ -1.72
LINC00428-201ENST00000415620 TAF1CQ15572 869 aaPredicted RBP4.28□□□□□ -1.72
LINC00428-201ENST00000415620 HSF5Q4G112 596 aaPredicted RBP4.28□□□□□ -1.72
LINC00428-201ENST00000415620 ZPBP2Q6X784 338 aa4.28□□□□□ -1.72
LINC00428-201ENST00000415620 TMC3Q7Z5M5 1100 aa4.28□□□□□ -1.72
LINC00428-201ENST00000415620 FCRL2Q96LA5 508 aaPredicted RBP4.28□□□□□ -1.72
LINC00428-201ENST00000415620 SORCS2Q96PQ0 1159 aa4.28□□□□□ -1.72
LINC00428-201ENST00000415620 KIF2CQ99661 725 aa4.28□□□□□ -1.72
LINC00428-201ENST00000415620 SUSD2Q9UGT4 822 aa4.28□□□□□ -1.72
LINC00428-201ENST00000415620 KLHL3Q9UH77 587 aa4.28□□□□□ -1.72
LINC00428-201ENST00000415620 IVNS1ABPQ9Y6Y0 642 aa4.28□□□□□ -1.72
LINC00428-201ENST00000415620 POGZQ7Z3K3 1410 aa4.28□□□□□ -1.72
LINC00428-201ENST00000415620 ZNF142P52746 1687 aaPredicted RBP4.27□□□□□ -1.73
LINC00428-201ENST00000415620 FKTNO75072 461 aa4.27□□□□□ -1.73
LINC00428-201ENST00000415620 PF4P02776 101 aa4.27□□□□□ -1.73
LINC00428-201ENST00000415620 SYPP08247 313 aa4.27□□□□□ -1.73
LINC00428-201ENST00000415620 CTSHP09668 335 aa4.27□□□□□ -1.73
LINC00428-201ENST00000415620 IGFBP6P24592 240 aaPredicted RBP4.27□□□□□ -1.73
LINC00428-201ENST00000415620 GBP1P32455 592 aa4.27□□□□□ -1.73
LINC00428-201ENST00000415620 LIMS1P48059 325 aa4.27□□□□□ -1.73
LINC00428-201ENST00000415620 HMGA2P52926 109 aa4.27□□□□□ -1.73
LINC00428-201ENST00000415620 KIR3DS1Q14943 382 aa4.27□□□□□ -1.73
LINC00428-201ENST00000415620 TARBP2Q15633 366 aaKnown RBP4.27□□□□□ -1.73
LINC00428-201ENST00000415620 NBPF9Q3BBW0 867 aa4.27□□□□□ -1.73
LINC00428-201ENST00000415620 CPZQ66K79 652 aa4.27□□□□□ -1.73
LINC00428-201ENST00000415620 PHACTR4Q8IZ21 702 aa4.27□□□□□ -1.73
LINC00428-201ENST00000415620 TNFRSF12AQ9NP84 129 aa4.27□□□□□ -1.73
LINC00428-201ENST00000415620 ACSL6Q9UKU0 697 aa4.27□□□□□ -1.73
LINC00428-201ENST00000415620 UACAQ9BZF9 1416 aa4.27□□□□□ -1.73
LINC00428-201ENST00000415620 CPS1P31327 1500 aa4.26□□□□□ -1.73
LINC00428-201ENST00000415620 ERICH3Q5RHP9 1530 aa4.26□□□□□ -1.73
LINC00428-201ENST00000415620 RNF17Q9BXT8 1623 aaKnown RBP4.26□□□□□ -1.73
LINC00428-201ENST00000415620 C1QTNF3-AMACRE9PGA6 284 aa4.26□□□□□ -1.73
LINC00428-201ENST00000415620 ITGB3P05106 788 aa4.26□□□□□ -1.73
LINC00428-201ENST00000415620 PRKCAP17252 672 aa4.26□□□□□ -1.73
LINC00428-201ENST00000415620 ENDOUP21128 410 aaKnown RBP4.26□□□□□ -1.73
LINC00428-201ENST00000415620 GARTP22102 1010 aa4.26□□□□□ -1.73
LINC00428-201ENST00000415620 RNF4P78317 190 aa4.26□□□□□ -1.73
LINC00428-201ENST00000415620 DAB2P98082 770 aa4.26□□□□□ -1.73
LINC00428-201ENST00000415620 SNW1Q13573 536 aaKnown RBP4.26□□□□□ -1.73
LINC00428-201ENST00000415620 MPP2Q14168 576 aa4.26□□□□□ -1.73
LINC00428-201ENST00000415620 NR1I3Q14994 352 aa4.26□□□□□ -1.73
LINC00428-201ENST00000415620 NBPF12Q5TAG4 269 aaPredicted RBP4.26□□□□□ -1.73
LINC00428-201ENST00000415620 ZC3H14Q6PJT7 736 aaKnown RBP4.26□□□□□ -1.73
LINC00428-201ENST00000415620 RPTNQ6XPR3 784 aa4.26□□□□□ -1.73
LINC00428-201ENST00000415620 LIPIQ6XZB0 460 aa4.26□□□□□ -1.73
LINC00428-201ENST00000415620 SLCO6A1Q86UG4 719 aa4.26□□□□□ -1.73
LINC00428-201ENST00000415620 LSRQ86X29 649 aaPredicted RBP4.26□□□□□ -1.73
LINC00428-201ENST00000415620 EAF1Q96JC9 268 aaPredicted RBP4.26□□□□□ -1.73
LINC00428-201ENST00000415620 SPATA25Q9BR10 227 aa4.26□□□□□ -1.73
LINC00428-201ENST00000415620 STRCP1A6NGW2 1772 aa4.26□□□□□ -1.73
LINC00428-201ENST00000415620 EP400Q96L91 3159 aa4.26□□□□□ -1.73
LINC00428-201ENST00000415620 A0A1W2PQ45 241 aaPredicted RBP4.25□□□□□ -1.73
LINC00428-201ENST00000415620 A0A1W2PQY0 241 aa4.25□□□□□ -1.73
LINC00428-201ENST00000415620 SIGLEC6O43699 453 aa4.25□□□□□ -1.73
LINC00428-201ENST00000415620 PRAMEF1O95521 474 aa4.25□□□□□ -1.73
LINC00428-201ENST00000415620 POLR1AO95602 1720 aaPredicted RBP4.25□□□□□ -1.73
LINC00428-201ENST00000415620 MSL3P1P0C860 447 aa4.25□□□□□ -1.73
LINC00428-201ENST00000415620 MAPKAPK2P49137 400 aa4.25□□□□□ -1.73
LINC00428-201ENST00000415620 PTPRKQ15262 1439 aa4.25□□□□□ -1.73
LINC00428-201ENST00000415620 VWA3BQ502W6 1294 aa4.25□□□□□ -1.73
LINC00428-201ENST00000415620 REC114Q7Z4M0 266 aa4.25□□□□□ -1.73
LINC00428-201ENST00000415620 ADGRG2Q8IZP9 1017 aa4.25□□□□□ -1.73
LINC00428-201ENST00000415620 NUP43Q8NFH3 380 aa4.25□□□□□ -1.73
LINC00428-201ENST00000415620 RSRP1Q9BUV0 290 aa4.25□□□□□ -1.73
LINC00428-201ENST00000415620 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.25□□□□□ -1.73
LINC00428-201ENST00000415620 ERVK13-1Q9NX77 482 aa4.25□□□□□ -1.73
LINC00428-201ENST00000415620 GPR55Q9Y2T6 319 aaPredicted RBP4.25□□□□□ -1.73
LINC00428-201ENST00000415620 ABCA9Q8IUA7 1624 aa4.24□□□□□ -1.73
LINC00428-201ENST00000415620 SH3D21A4FU49 640 aa4.24□□□□□ -1.73
LINC00428-201ENST00000415620 FBLN1P23142 703 aa4.24□□□□□ -1.73
LINC00428-201ENST00000415620 CNR2P34972 360 aa4.24□□□□□ -1.73
LINC00428-201ENST00000415620 GDF5P43026 501 aa4.24□□□□□ -1.73
LINC00428-201ENST00000415620 FOXO4P98177 505 aa4.24□□□□□ -1.73
LINC00428-201ENST00000415620 ZNF200P98182 395 aaPredicted RBP4.24□□□□□ -1.73
LINC00428-201ENST00000415620 KCNA1Q09470 495 aa4.24□□□□□ -1.73
LINC00428-201ENST00000415620 PLEKHN1Q494U1 663 aaPredicted RBP4.24□□□□□ -1.73
LINC00428-201ENST00000415620 C14orf37Q86TY3 774 aa4.24□□□□□ -1.73
LINC00428-201ENST00000415620 FNIP1Q8TF40 1166 aa4.24□□□□□ -1.73
LINC00428-201ENST00000415620 DDX1Q92499 740 aaKnown RBP4.24□□□□□ -1.73
LINC00428-201ENST00000415620 TMEM74Q96NL1 305 aa4.24□□□□□ -1.73
LINC00428-201ENST00000415620 ARID3AQ99856 593 aa4.24□□□□□ -1.73
LINC00428-201ENST00000415620 MENTQ9BUN1 341 aa4.24□□□□□ -1.73
LINC00428-201ENST00000415620 MRIQ9BWK5 157 aa4.24□□□□□ -1.73
LINC00428-201ENST00000415620 PRDM14Q9GZV8 571 aa4.24□□□□□ -1.73
LINC00428-201ENST00000415620 PMF1-BGLAPU3KQ54 211 aa4.24□□□□□ -1.73
LINC00428-201ENST00000415620 ZFYVE16Q7Z3T8 1539 aa4.24□□□□□ -1.73
LINC00428-201ENST00000415620 TNIKQ9UKE5 1360 aa4.24□□□□□ -1.73
LINC00428-201ENST00000415620 AKNAQ7Z591 1439 aa4.23□□□□□ -1.73
LINC00428-201ENST00000415620 ZMYM4Q5VZL5 1548 aa4.23□□□□□ -1.73
LINC00428-201ENST00000415620 A0A1B0GTL3 188 aa4.23□□□□□ -1.73
LINC00428-201ENST00000415620 F6X3S4 739 aa4.23□□□□□ -1.73
LINC00428-201ENST00000415620 ZNF205O95201 554 aa4.23□□□□□ -1.73
LINC00428-201ENST00000415620 ATE1O95260 518 aa4.23□□□□□ -1.73
LINC00428-201ENST00000415620 GJA9P57773 515 aa4.23□□□□□ -1.73
LINC00428-201ENST00000415620 ARSHQ5FYA8 562 aa4.23□□□□□ -1.73
LINC00428-201ENST00000415620 CDCP2Q5VXM1 449 aa4.23□□□□□ -1.73
LINC00428-201ENST00000415620 SAPCD2Q86UD0 394 aa4.23□□□□□ -1.73
LINC00428-201ENST00000415620 TTC9BQ8N6N2 239 aa4.23□□□□□ -1.73
LINC00428-201ENST00000415620 TMEM52Q8NDY8 209 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms