RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 CPXCR1Q8N123 301 aa11.33□□□□□ -0.6
LINC01090-201ENST00000415357 ANKK1Q8NFD2 765 aa11.33□□□□□ -0.6
LINC01090-201ENST00000415357 ZKSCAN3Q9BRR0 538 aa11.33□□□□□ -0.6
LINC01090-201ENST00000415357 DSCC1Q9BVC3 393 aa11.33□□□□□ -0.6
LINC01090-201ENST00000415357 MROH8Q9H579 483 aa11.33□□□□□ -0.6
LINC01090-201ENST00000415357 HMX1Q9NP08 348 aaPredicted RBP11.33□□□□□ -0.6
LINC01090-201ENST00000415357 SYNPO2Q9UMS6 1093 aa11.33□□□□□ -0.6
LINC01090-201ENST00000415357 RIPK3Q9Y572 518 aa11.33□□□□□ -0.6
LINC01090-201ENST00000415357 RPTORQ8N122 1335 aa11.33□□□□□ -0.6
LINC01090-201ENST00000415357 PDE4DIPQ5VU43 2346 aa11.32□□□□□ -0.6
LINC01090-201ENST00000415357 RCCD1A6NED2 376 aa11.32□□□□□ -0.6
LINC01090-201ENST00000415357 FARP2O94887 1054 aaPredicted RBP11.32□□□□□ -0.6
LINC01090-201ENST00000415357 SLC25A27O95847 323 aa11.32□□□□□ -0.6
LINC01090-201ENST00000415357 TFRCP02786 760 aaKnown RBP11.32□□□□□ -0.6
LINC01090-201ENST00000415357 HOXC6P09630 235 aa11.32□□□□□ -0.6
LINC01090-201ENST00000415357 DNAJB2P25686 324 aa11.32□□□□□ -0.6
LINC01090-201ENST00000415357 CYP2C19P33261 490 aa11.32□□□□□ -0.6
LINC01090-201ENST00000415357 SLC1A4P43007 532 aa11.32□□□□□ -0.6
LINC01090-201ENST00000415357 NOVP48745 357 aa11.32□□□□□ -0.6
LINC01090-201ENST00000415357 SNAP25P60880 206 aa11.32□□□□□ -0.6
LINC01090-201ENST00000415357 IKQ13123 557 aaPredicted RBP11.32□□□□□ -0.6
LINC01090-201ENST00000415357 CCDC96Q2M329 555 aa11.32□□□□□ -0.6
LINC01090-201ENST00000415357 UBE2Q1Q7Z7E8 422 aa11.32□□□□□ -0.6
LINC01090-201ENST00000415357 TRMT44Q8IYL2 757 aaKnown RBP11.32□□□□□ -0.6
LINC01090-201ENST00000415357 PRPF38AQ8NAV1 312 aaKnown RBP11.32□□□□□ -0.6
LINC01090-201ENST00000415357 GMCL1Q96IK5 515 aa11.32□□□□□ -0.6
LINC01090-201ENST00000415357 MMP19Q99542 508 aa11.32□□□□□ -0.6
LINC01090-201ENST00000415357 TMEM47Q9BQJ4 181 aa11.32□□□□□ -0.6
LINC01090-201ENST00000415357 TEX13BQ9BXU2 312 aa11.32□□□□□ -0.6
LINC01090-201ENST00000415357 RAVER2Q9HCJ3 691 aaKnown RBP11.32□□□□□ -0.6
LINC01090-201ENST00000415357 FEM1BQ9UK73 627 aa11.32□□□□□ -0.6
LINC01090-201ENST00000415357 RAD50Q92878 1312 aa11.32□□□□□ -0.6
LINC01090-201ENST00000415357 B4E1Z4 1266 aa11.31□□□□□ -0.6
LINC01090-201ENST00000415357 STRNO43815 780 aa11.31□□□□□ -0.6
LINC01090-201ENST00000415357 ZBED4O75132 1171 aa11.31□□□□□ -0.6
LINC01090-201ENST00000415357 RNF40O75150 1001 aa11.31□□□□□ -0.6
LINC01090-201ENST00000415357 KDM4AO75164 1064 aa11.31□□□□□ -0.6
LINC01090-201ENST00000415357 PGK2P07205 417 aa11.31□□□□□ -0.6
LINC01090-201ENST00000415357 FCER1AP12319 257 aa11.31□□□□□ -0.6
LINC01090-201ENST00000415357 TAL1P17542 331 aaPredicted RBP11.31□□□□□ -0.6
LINC01090-201ENST00000415357 STAT2P52630 851 aa11.31□□□□□ -0.6
LINC01090-201ENST00000415357 PTH1RQ03431 593 aa11.31□□□□□ -0.6
LINC01090-201ENST00000415357 MFSD14CQ5VZR4 134 aa11.31□□□□□ -0.6
LINC01090-201ENST00000415357 RCSD1Q6JBY9 416 aa11.31□□□□□ -0.6
LINC01090-201ENST00000415357 CENPQQ7L2Z9 268 aaPredicted RBP11.31□□□□□ -0.6
LINC01090-201ENST00000415357 TRPV1Q8NER1 839 aa11.31□□□□□ -0.6
LINC01090-201ENST00000415357 DIS3LQ8TF46 1054 aaKnown RBP11.31□□□□□ -0.6
LINC01090-201ENST00000415357 PHOX2BQ99453 314 aa11.31□□□□□ -0.6
LINC01090-201ENST00000415357 RNF41Q9H4P4 317 aaPredicted RBP11.31□□□□□ -0.6
LINC01090-201ENST00000415357 SLC38A10Q9HBR0 1119 aa11.31□□□□□ -0.6
LINC01090-201ENST00000415357 TCP11L1Q9NUJ3 509 aa11.31□□□□□ -0.6
LINC01090-201ENST00000415357 CTDP1Q9Y5B0 961 aaPredicted RBP11.31□□□□□ -0.6
LINC01090-201ENST00000415357 FRMPD2Q68DX3 1309 aaPredicted RBP11.31□□□□□ -0.6
LINC01090-201ENST00000415357 TOP1P11387 765 aaKnown RBP11.3□□□□□ -0.6
LINC01090-201ENST00000415357 PCP11498 1178 aaKnown RBP11.3□□□□□ -0.6
LINC01090-201ENST00000415357 IMMTQ16891 758 aaKnown RBP11.3□□□□□ -0.6
LINC01090-201ENST00000415357 PRPF38BQ5VTL8 546 aaKnown RBP11.3□□□□□ -0.6
LINC01090-201ENST00000415357 TTBK2Q6IQ55 1244 aa11.3□□□□□ -0.6
LINC01090-201ENST00000415357 ABRAQ8N0Z2 381 aa11.3□□□□□ -0.6
LINC01090-201ENST00000415357 ESR2Q92731 530 aa11.3□□□□□ -0.6
LINC01090-201ENST00000415357 LRCH3Q96II8 777 aa11.3□□□□□ -0.6
LINC01090-201ENST00000415357 MAML3Q96JK9 1138 aa11.3□□□□□ -0.6
LINC01090-201ENST00000415357 TAF6LQ9Y6J9 622 aa11.3□□□□□ -0.6
LINC01090-201ENST00000415357 SGSM2O43147 1006 aa11.29□□□□□ -0.6
LINC01090-201ENST00000415357 IGHA2P01877 340 aa11.29□□□□□ -0.6
LINC01090-201ENST00000415357 CNGA1P29973 690 aa11.29□□□□□ -0.6
LINC01090-201ENST00000415357 SLC16A2P36021 539 aa11.29□□□□□ -0.6
LINC01090-201ENST00000415357 KCTD2Q14681 263 aa11.29□□□□□ -0.6
LINC01090-201ENST00000415357 PRAMEF19Q5SWL8 479 aa11.29□□□□□ -0.6
LINC01090-201ENST00000415357 SWT1Q5T5J6 900 aaKnown RBP11.29□□□□□ -0.6
LINC01090-201ENST00000415357 ANO1Q5XXA6 986 aa11.29□□□□□ -0.6
LINC01090-201ENST00000415357 OLFML2BQ68BL8 750 aa11.29□□□□□ -0.6
LINC01090-201ENST00000415357 CCDC174Q6PII3 467 aa11.29□□□□□ -0.6
LINC01090-201ENST00000415357 FAM160B2Q86V87 743 aa11.29□□□□□ -0.6
LINC01090-201ENST00000415357 CHURC1Q8WUH1 139 aa11.29□□□□□ -0.6
LINC01090-201ENST00000415357 DCAF4Q8WV16 495 aa11.29□□□□□ -0.6
LINC01090-201ENST00000415357 RUFY2Q8WXA3 655 aa11.29□□□□□ -0.6
LINC01090-201ENST00000415357 PAWRQ96IZ0 340 aaKnown RBP11.29□□□□□ -0.6
LINC01090-201ENST00000415357 AGBL1Q96MI9 1066 aa11.29□□□□□ -0.6
LINC01090-201ENST00000415357 GPCPD1Q9NPB8 672 aa11.29□□□□□ -0.6
LINC01090-201ENST00000415357 PLSCR2Q9NRY7 297 aa11.29□□□□□ -0.6
LINC01090-201ENST00000415357 HOMER2Q9NSB8 354 aa11.29□□□□□ -0.6
LINC01090-201ENST00000415357 CTNNA3Q9UI47 895 aa11.29□□□□□ -0.6
LINC01090-201ENST00000415357 PRR12Q9ULL5 1215 aa11.29□□□□□ -0.6
LINC01090-201ENST00000415357 FRMPD3Q5JV73 1810 aa11.29□□□□□ -0.6
LINC01090-201ENST00000415357 ZNF536O15090 1300 aa11.29□□□□□ -0.6
LINC01090-201ENST00000415357 PLXNA1Q9UIW2 1896 aa11.28□□□□□ -0.6
LINC01090-201ENST00000415357 ATP2A1O14983 1001 aa11.28□□□□□ -0.6
LINC01090-201ENST00000415357 CYP21A2P08686 494 aa11.28□□□□□ -0.6
LINC01090-201ENST00000415357 PDHBP11177 359 aa11.28□□□□□ -0.6
LINC01090-201ENST00000415357 CYBAP13498 195 aa11.28□□□□□ -0.6
LINC01090-201ENST00000415357 COPB2P35606 906 aa11.28□□□□□ -0.6
LINC01090-201ENST00000415357 ZNF792Q3KQV3 632 aa11.28□□□□□ -0.6
LINC01090-201ENST00000415357 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.28□□□□□ -0.6
LINC01090-201ENST00000415357 OGDHLQ9ULD0 1010 aa11.28□□□□□ -0.6
LINC01090-201ENST00000415357 ZNFX1Q9P2E3 1918 aaKnown RBP11.28□□□□□ -0.6
LINC01090-201ENST00000415357 PLA2G6O60733 806 aa11.27□□□□□ -0.61
LINC01090-201ENST00000415357 GOLGA8HP0CJ92 632 aa11.27□□□□□ -0.61
LINC01090-201ENST00000415357 ALAS1P13196 640 aa11.27□□□□□ -0.61
LINC01090-201ENST00000415357 PRKCSHP14314 528 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms