RNA–Protein interactions for RNA: ENST00000414017.5

HLA-DMB-257, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-257ENST00000414017 ATP2A1O14983 1001 aa12.07□□□□□ -0.48
HLA-DMB-257ENST00000414017 PPP1R11O60927 126 aaPredicted RBP12.07□□□□□ -0.48
HLA-DMB-257ENST00000414017 CD2BP2O95400 341 aaKnown RBP12.07□□□□□ -0.48
HLA-DMB-257ENST00000414017 FCER1AP12319 257 aa12.07□□□□□ -0.48
HLA-DMB-257ENST00000414017 CYP2B6P20813 491 aa12.07□□□□□ -0.48
HLA-DMB-257ENST00000414017 COPB2P35606 906 aa12.07□□□□□ -0.48
HLA-DMB-257ENST00000414017 PRKCZQ05513 592 aa12.07□□□□□ -0.48
HLA-DMB-257ENST00000414017 SSRP1Q08945 709 aaKnown RBP12.07□□□□□ -0.48
HLA-DMB-257ENST00000414017 KCTD2Q14681 263 aa12.07□□□□□ -0.48
HLA-DMB-257ENST00000414017 PPP2R5BQ15173 497 aa12.07□□□□□ -0.48
HLA-DMB-257ENST00000414017 OTOP1Q7RTM1 612 aa12.07□□□□□ -0.48
HLA-DMB-257ENST00000414017 DPP9Q86TI2 863 aa12.07□□□□□ -0.48
HLA-DMB-257ENST00000414017 SHCBP1Q8NEM2 672 aa12.07□□□□□ -0.48
HLA-DMB-257ENST00000414017 CHST13Q8NET6 341 aa12.07□□□□□ -0.48
HLA-DMB-257ENST00000414017 RAET1EQ8TD07 263 aa12.07□□□□□ -0.48
HLA-DMB-257ENST00000414017 DDX11Q96FC9 970 aa12.07□□□□□ -0.48
HLA-DMB-257ENST00000414017 FBXO40Q9UH90 709 aa12.07□□□□□ -0.48
HLA-DMB-257ENST00000414017 GABRQQ9UN88 632 aa12.07□□□□□ -0.48
HLA-DMB-257ENST00000414017 PCDHA1Q9Y5I3 950 aa12.07□□□□□ -0.48
HLA-DMB-257ENST00000414017 NFIBO00712 420 aa12.06□□□□□ -0.48
HLA-DMB-257ENST00000414017 PGK2P07205 417 aa12.06□□□□□ -0.48
HLA-DMB-257ENST00000414017 PTPREP23469 700 aa12.06□□□□□ -0.48
HLA-DMB-257ENST00000414017 CALML3P27482 149 aa12.06□□□□□ -0.48
HLA-DMB-257ENST00000414017 SMARCA1P28370 1054 aa12.06□□□□□ -0.48
HLA-DMB-257ENST00000414017 ADORA2AP29274 412 aa12.06□□□□□ -0.48
HLA-DMB-257ENST00000414017 FOSBP53539 338 aa12.06□□□□□ -0.48
HLA-DMB-257ENST00000414017 TKFCQ3LXA3 575 aa12.06□□□□□ -0.48
HLA-DMB-257ENST00000414017 CTU1Q7Z7A3 348 aaKnown RBP12.06□□□□□ -0.48
HLA-DMB-257ENST00000414017 TRIM22Q8IYM9 498 aa12.06□□□□□ -0.48
HLA-DMB-257ENST00000414017 GTF3C6Q969F1 213 aa12.06□□□□□ -0.48
HLA-DMB-257ENST00000414017 MTMR8Q96EF0 704 aa12.06□□□□□ -0.48
HLA-DMB-257ENST00000414017 ZSCAN31Q96LW9 406 aaPredicted RBP12.06□□□□□ -0.48
HLA-DMB-257ENST00000414017 NUDT12Q9BQG2 462 aa12.06□□□□□ -0.48
HLA-DMB-257ENST00000414017 PRDM10Q9NQV6 1147 aa12.06□□□□□ -0.48
HLA-DMB-257ENST00000414017 SRRDQ9UH36 339 aa12.06□□□□□ -0.48
HLA-DMB-257ENST00000414017 MRPL11Q9Y3B7 192 aaKnown RBP12.06□□□□□ -0.48
HLA-DMB-257ENST00000414017 ABCB11O95342 1321 aa12.06□□□□□ -0.48
HLA-DMB-257ENST00000414017 NID2Q14112 1375 aa12.05□□□□□ -0.48
HLA-DMB-257ENST00000414017 SLC15A5A6NIM6 579 aa12.05□□□□□ -0.48
HLA-DMB-257ENST00000414017 CDKL5O76039 1030 aa12.05□□□□□ -0.48
HLA-DMB-257ENST00000414017 CFBP00751 764 aa12.05□□□□□ -0.48
HLA-DMB-257ENST00000414017 IFNAR1P17181 557 aa12.05□□□□□ -0.48
HLA-DMB-257ENST00000414017 FLT3LGP49771 235 aa12.05□□□□□ -0.48
HLA-DMB-257ENST00000414017 NAPAP54920 295 aa12.05□□□□□ -0.48
HLA-DMB-257ENST00000414017 SH2B1Q9NRF2 756 aaPredicted RBP12.05□□□□□ -0.48
HLA-DMB-257ENST00000414017 BIN2Q9UBW5 565 aaPredicted RBP12.05□□□□□ -0.48
HLA-DMB-257ENST00000414017 PNMA2Q9UL42 364 aa12.05□□□□□ -0.48
HLA-DMB-257ENST00000414017 PTCH2Q9Y6C5 1203 aa12.05□□□□□ -0.48
HLA-DMB-257ENST00000414017 MYH6P13533 1939 aa12.05□□□□□ -0.48
HLA-DMB-257ENST00000414017 MGAMO43451 1857 aa12.04□□□□□ -0.48
HLA-DMB-257ENST00000414017 POTEB2H3BUK9 544 aa12.04□□□□□ -0.48
HLA-DMB-257ENST00000414017 PRPF3O43395 683 aaKnown RBP12.04□□□□□ -0.48
HLA-DMB-257ENST00000414017 STRNO43815 780 aa12.04□□□□□ -0.48
HLA-DMB-257ENST00000414017 RGS2P41220 211 aa12.04□□□□□ -0.48
HLA-DMB-257ENST00000414017 FUT2Q10981 343 aa12.04□□□□□ -0.48
HLA-DMB-257ENST00000414017 TRAF1Q13077 416 aa12.04□□□□□ -0.48
HLA-DMB-257ENST00000414017 MAP2K5Q13163 448 aa12.04□□□□□ -0.48
HLA-DMB-257ENST00000414017 BAATQ14032 418 aaPredicted RBP12.04□□□□□ -0.48
HLA-DMB-257ENST00000414017 GRB14Q14449 540 aa12.04□□□□□ -0.48
HLA-DMB-257ENST00000414017 NTRK3Q16288 839 aa12.04□□□□□ -0.48
HLA-DMB-257ENST00000414017 WWC2Q6AWC2 1192 aa12.04□□□□□ -0.48
HLA-DMB-257ENST00000414017 SLC30A10Q6XR72 485 aa12.04□□□□□ -0.48
HLA-DMB-257ENST00000414017 RNF207Q6ZRF8 634 aa12.04□□□□□ -0.48
HLA-DMB-257ENST00000414017 SOCS4Q8WXH5 440 aa12.04□□□□□ -0.48
HLA-DMB-257ENST00000414017 CLEC4DQ8WXI8 215 aa12.04□□□□□ -0.48
HLA-DMB-257ENST00000414017 TBC1D5Q92609 795 aa12.04□□□□□ -0.48
HLA-DMB-257ENST00000414017 TMX3Q96JJ7 454 aa12.04□□□□□ -0.48
HLA-DMB-257ENST00000414017 A1CFQ9NQ94 594 aaKnown RBP12.04□□□□□ -0.48
HLA-DMB-257ENST00000414017 PLXNB2O15031 1838 aa12.04□□□□□ -0.48
HLA-DMB-257ENST00000414017 JAK2O60674 1132 aa12.03□□□□□ -0.48
HLA-DMB-257ENST00000414017 COBLO75128 1261 aa12.03□□□□□ -0.48
HLA-DMB-257ENST00000414017 CTDNEP1O95476 244 aa12.03□□□□□ -0.48
HLA-DMB-257ENST00000414017 MYCP01106 439 aaPredicted RBP12.03□□□□□ -0.48
HLA-DMB-257ENST00000414017 GNRH1P01148 92 aa12.03□□□□□ -0.48
HLA-DMB-257ENST00000414017 SCG2P13521 617 aa12.03□□□□□ -0.48
HLA-DMB-257ENST00000414017 ELNP15502 786 aa12.03□□□□□ -0.48
HLA-DMB-257ENST00000414017 HOXA13P31271 388 aaPredicted RBP12.03□□□□□ -0.48
HLA-DMB-257ENST00000414017 MCM2P49736 904 aa12.03□□□□□ -0.48
HLA-DMB-257ENST00000414017 ST3GAL1Q11201 340 aa12.03□□□□□ -0.48
HLA-DMB-257ENST00000414017 PFKFB3Q16875 520 aaPredicted RBP12.03□□□□□ -0.48
HLA-DMB-257ENST00000414017 MORN1Q5T089 497 aa12.03□□□□□ -0.48
HLA-DMB-257ENST00000414017 MCF2L2Q86YR7 1114 aa12.03□□□□□ -0.48
HLA-DMB-257ENST00000414017 HSCBQ8IWL3 235 aa12.03□□□□□ -0.48
HLA-DMB-257ENST00000414017 PURBQ96QR8 312 aaKnown RBP12.03□□□□□ -0.48
HLA-DMB-257ENST00000414017 RNF26Q9BY78 433 aaPredicted RBP12.03□□□□□ -0.48
HLA-DMB-257ENST00000414017 FOXD4L1Q9NU39 408 aa12.03□□□□□ -0.48
HLA-DMB-257ENST00000414017 SLC5A4Q9NY91 659 aa12.03□□□□□ -0.48
HLA-DMB-257ENST00000414017 RBM27Q9P2N5 1060 aaKnown RBP12.03□□□□□ -0.48
HLA-DMB-257ENST00000414017 ORC3Q9UBD5 711 aaPredicted RBP12.03□□□□□ -0.48
HLA-DMB-257ENST00000414017 GJD2Q9UKL4 321 aa12.03□□□□□ -0.48
HLA-DMB-257ENST00000414017 PTPN22Q9Y2R2 807 aa12.03□□□□□ -0.48
HLA-DMB-257ENST00000414017 PFASO15067 1338 aa12.03□□□□□ -0.48
HLA-DMB-257ENST00000414017 SMCHD1A6NHR9 2005 aa12.03□□□□□ -0.48
HLA-DMB-257ENST00000414017 STXBP3O00186 592 aa12.02□□□□□ -0.49
HLA-DMB-257ENST00000414017 ADCY3O60266 1144 aa12.02□□□□□ -0.49
HLA-DMB-257ENST00000414017 ABCB7O75027 752 aa12.02□□□□□ -0.49
HLA-DMB-257ENST00000414017 DEXIO95424 95 aa12.02□□□□□ -0.49
HLA-DMB-257ENST00000414017 RPS6P62753 249 aaKnown RBP12.02□□□□□ -0.49
HLA-DMB-257ENST00000414017 CNTN2Q02246 1040 aa12.02□□□□□ -0.49
HLA-DMB-257ENST00000414017 PKN1Q16512 942 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms