RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 ALG1L2C9J202 215 aa10.6□□□□□ -0.71
SNHG3-201ENST00000413987 SYT1P21579 422 aa10.6□□□□□ -0.71
SNHG3-201ENST00000413987 PTGER2P43116 358 aa10.6□□□□□ -0.71
SNHG3-201ENST00000413987 PHKA1P46020 1223 aa10.6□□□□□ -0.71
SNHG3-201ENST00000413987 KMT5BQ4FZB7 885 aa10.6□□□□□ -0.71
SNHG3-201ENST00000413987 JAKMIP3Q5VZ66 844 aa10.6□□□□□ -0.71
SNHG3-201ENST00000413987 ZCCHC8Q6NZY4 707 aaKnown RBP10.6□□□□□ -0.71
SNHG3-201ENST00000413987 JPH3Q8WXH2 748 aaPredicted RBP10.6□□□□□ -0.71
SNHG3-201ENST00000413987 TBC1D31Q96DN5 1066 aa10.6□□□□□ -0.71
SNHG3-201ENST00000413987 NELL2Q99435 816 aa10.6□□□□□ -0.71
SNHG3-201ENST00000413987 CENPOQ9BU64 300 aa10.6□□□□□ -0.71
SNHG3-201ENST00000413987 RBM28Q9NW13 759 aaKnown RBP10.6□□□□□ -0.71
SNHG3-201ENST00000413987 MROH5Q6ZUA9 1318 aa10.59□□□□□ -0.71
SNHG3-201ENST00000413987 CHRNA5P30532 468 aa10.59□□□□□ -0.71
SNHG3-201ENST00000413987 HSPA4P34932 840 aa10.59□□□□□ -0.71
SNHG3-201ENST00000413987 ZNF75DP51815 510 aa10.59□□□□□ -0.71
SNHG3-201ENST00000413987 MAP3K9P80192 1104 aa10.59□□□□□ -0.71
SNHG3-201ENST00000413987 CCDC158Q5M9N0 1113 aa10.59□□□□□ -0.71
SNHG3-201ENST00000413987 PLA2G4DQ86XP0 818 aa10.59□□□□□ -0.71
SNHG3-201ENST00000413987 ZNF354CQ86Y25 554 aa10.59□□□□□ -0.71
SNHG3-201ENST00000413987 KIAA0825Q8IV33 1275 aa10.59□□□□□ -0.71
SNHG3-201ENST00000413987 APPL2Q8NEU8 664 aa10.59□□□□□ -0.71
SNHG3-201ENST00000413987 SCLT1Q96NL6 688 aa10.59□□□□□ -0.71
SNHG3-201ENST00000413987 NOL10Q9BSC4 688 aaKnown RBP10.59□□□□□ -0.71
SNHG3-201ENST00000413987 TRIM5Q9C035 493 aa10.59□□□□□ -0.71
SNHG3-201ENST00000413987 NUP62CLQ9H1M0 184 aa10.59□□□□□ -0.71
SNHG3-201ENST00000413987 TMEM260Q9NX78 707 aa10.59□□□□□ -0.71
SNHG3-201ENST00000413987 PGAP2Q9UHJ9 254 aa10.59□□□□□ -0.71
SNHG3-201ENST00000413987 LIMCH1Q9UPQ0 1083 aa10.59□□□□□ -0.71
SNHG3-201ENST00000413987 IPPQ9Y573 584 aa10.59□□□□□ -0.71
SNHG3-201ENST00000413987 COL11A2P13942 1736 aaPredicted RBP10.59□□□□□ -0.71
SNHG3-201ENST00000413987 SNX2O60749 519 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 RHOBTB3O94955 611 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 SSBP05455 408 aaKnown RBP eCLIP10.58□□□□□ -0.72
SNHG3-201ENST00000413987 CYP2C19P33261 490 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 GYG1P46976 350 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 BCAMP50895 628 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 SATB1Q01826 763 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 TYRO3Q06418 890 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 PAK2Q13177 524 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 PTPN14Q15678 1187 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 CRY2Q49AN0 593 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 HSP90B2PQ58FF3 399 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 TEX35Q5T0J7 233 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 TTLL5Q6EMB2 1281 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 KLHL10Q6JEL2 608 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 ANKS3Q6ZW76 656 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 ILDR2Q71H61 639 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 BRSK2Q8IWQ3 736 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 RABL2BQ9UNT1 228 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 AOX1Q06278 1338 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 A0A1B0GUL6 1792 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 ERICH4A6NGS2 130 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 AKAP10O43572 662 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 ABCB7O75027 752 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 ATP5JP18859 108 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 FGFR2P21802 821 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 MCAMP43121 646 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 NEK3P51956 506 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 SFSWAPQ12872 951 aaKnown RBP10.58□□□□□ -0.72
SNHG3-201ENST00000413987 GRAPQ13588 217 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 TTC39AQ5SRH9 613 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 CWC27Q6UX04 472 aaKnown RBP10.58□□□□□ -0.72
SNHG3-201ENST00000413987 MAATS1Q7Z4T9 603 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 C11orf74Q86VG3 221 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 TXNRD3Q86VQ6 643 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 OR8H2Q8N162 312 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 TDRD7Q8NHU6 1098 aaKnown RBP10.58□□□□□ -0.72
SNHG3-201ENST00000413987 GRAPLQ8TC17 118 aaPredicted RBP10.58□□□□□ -0.72
SNHG3-201ENST00000413987 RNF217Q8TC41 542 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 TRPM4Q8TD43 1214 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 FAM227BQ96M60 508 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 MAP3K14Q99558 947 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 UPF3BQ9BZI7 483 aaKnown RBP10.58□□□□□ -0.72
SNHG3-201ENST00000413987 JAG2Q9Y219 1238 aa10.58□□□□□ -0.72
SNHG3-201ENST00000413987 BAIAP3O94812 1187 aa10.57□□□□□ -0.72
SNHG3-201ENST00000413987 SLU7O95391 586 aaKnown RBP10.57□□□□□ -0.72
SNHG3-201ENST00000413987 IFIT1P09914 478 aaKnown RBP10.57□□□□□ -0.72
SNHG3-201ENST00000413987 ADD2P35612 726 aa10.57□□□□□ -0.72
SNHG3-201ENST00000413987 RAB33AQ14088 237 aa10.57□□□□□ -0.72
SNHG3-201ENST00000413987 DSC3Q14574 896 aa10.57□□□□□ -0.72
SNHG3-201ENST00000413987 CCDC102BQ68D86 513 aa10.57□□□□□ -0.72
SNHG3-201ENST00000413987 C16orf87Q6PH81 154 aa10.57□□□□□ -0.72
SNHG3-201ENST00000413987 PLPP6Q8IY26 295 aa10.57□□□□□ -0.72
SNHG3-201ENST00000413987 CNTROBQ8N137 903 aa10.57□□□□□ -0.72
SNHG3-201ENST00000413987 LRRN4Q8WUT4 740 aa10.57□□□□□ -0.72
SNHG3-201ENST00000413987 DNAJC7Q99615 494 aa10.57□□□□□ -0.72
SNHG3-201ENST00000413987 HERPUD2Q9BSE4 406 aa10.57□□□□□ -0.72
SNHG3-201ENST00000413987 FSD1Q9BTV5 496 aa10.57□□□□□ -0.72
SNHG3-201ENST00000413987 CDHR5Q9HBB8 845 aa10.57□□□□□ -0.72
SNHG3-201ENST00000413987 GPR108Q9NPR9 543 aa10.57□□□□□ -0.72
SNHG3-201ENST00000413987 NOD1Q9Y239 953 aa10.57□□□□□ -0.72
SNHG3-201ENST00000413987 NRXN2Q9P2S2 1712 aa10.57□□□□□ -0.72
SNHG3-201ENST00000413987 ELP1O95163 1332 aa10.57□□□□□ -0.72
SNHG3-201ENST00000413987 CACNA1SQ13698 1873 aa10.57□□□□□ -0.72
SNHG3-201ENST00000413987 TNFAIP3P21580 790 aa10.57□□□□□ -0.72
SNHG3-201ENST00000413987 ZAP70P43403 619 aa10.57□□□□□ -0.72
SNHG3-201ENST00000413987 LRMPQ12912 555 aa10.57□□□□□ -0.72
SNHG3-201ENST00000413987 PDE1CQ14123 709 aaPredicted RBP10.57□□□□□ -0.72
SNHG3-201ENST00000413987 LPIN2Q92539 896 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms