RNA–Protein interactions for RNA: ENST00000413985.1

CRIM1-202, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-202ENST00000413985 ZBED2Q9BTP6 218 aa13.22□□□□□ -0.29
CRIM1-202ENST00000413985 AP5M1Q9H0R1 490 aa13.22□□□□□ -0.29
CRIM1-202ENST00000413985 SH2D4AQ9H788 454 aa13.22□□□□□ -0.29
CRIM1-202ENST00000413985 RAVER2Q9HCJ3 691 aaKnown RBP13.22□□□□□ -0.29
CRIM1-202ENST00000413985 TRIOO75962 3097 aa13.22□□□□□ -0.29
CRIM1-202ENST00000413985 COL4A6Q14031 1691 aa13.21□□□□□ -0.29
CRIM1-202ENST00000413985 ZEB2O60315 1214 aa13.21□□□□□ -0.29
CRIM1-202ENST00000413985 RFC2P35250 354 aa13.21□□□□□ -0.29
CRIM1-202ENST00000413985 KCNJ6P48051 423 aa13.21□□□□□ -0.29
CRIM1-202ENST00000413985 G3BP1Q13283 466 aaKnown RBP eCLIP13.21□□□□□ -0.29
CRIM1-202ENST00000413985 GPNMBQ14956 572 aa13.21□□□□□ -0.29
CRIM1-202ENST00000413985 HERC4Q5GLZ8 1057 aaPredicted RBP13.21□□□□□ -0.29
CRIM1-202ENST00000413985 FAM117BQ6P1L5 589 aa13.21□□□□□ -0.29
CRIM1-202ENST00000413985 EEPD1Q7L9B9 569 aa13.21□□□□□ -0.29
CRIM1-202ENST00000413985 FBXO16Q8IX29 292 aaPredicted RBP13.21□□□□□ -0.29
CRIM1-202ENST00000413985 SLF1Q9BQI6 1058 aa13.21□□□□□ -0.29
CRIM1-202ENST00000413985 SMC4Q9NTJ3 1288 aa13.21□□□□□ -0.29
CRIM1-202ENST00000413985 CYP2D7A0A087X1C5 515 aa13.2□□□□□ -0.3
CRIM1-202ENST00000413985 SOWAHBA6NEL2 793 aa13.2□□□□□ -0.3
CRIM1-202ENST00000413985 BAIAP3O94812 1187 aa13.2□□□□□ -0.3
CRIM1-202ENST00000413985 SUPT20HL2P0C7V6 817 aa13.2□□□□□ -0.3
CRIM1-202ENST00000413985 CLUL1Q15846 466 aa13.2□□□□□ -0.3
CRIM1-202ENST00000413985 CERS3Q8IU89 383 aa13.2□□□□□ -0.3
CRIM1-202ENST00000413985 RNF135Q8IUD6 432 aa13.2□□□□□ -0.3
CRIM1-202ENST00000413985 PBXIP1Q96AQ6 731 aa13.2□□□□□ -0.3
CRIM1-202ENST00000413985 SEZ6LQ9BYH1 1024 aa13.2□□□□□ -0.3
CRIM1-202ENST00000413985 DCP1AQ9NPI6 582 aaPredicted RBP13.2□□□□□ -0.3
CRIM1-202ENST00000413985 HOMER2Q9NSB8 354 aa13.2□□□□□ -0.3
CRIM1-202ENST00000413985 PRKAG3Q9UGI9 489 aa13.2□□□□□ -0.3
CRIM1-202ENST00000413985 DBNLQ9UJU6 430 aaKnown RBP13.2□□□□□ -0.3
CRIM1-202ENST00000413985 NOB1Q9ULX3 412 aaKnown RBP13.2□□□□□ -0.3
CRIM1-202ENST00000413985 MAGEB6P1A0A0J9YX57 407 aa13.19□□□□□ -0.3
CRIM1-202ENST00000413985 TMEM221A6NGB7 291 aa13.19□□□□□ -0.3
CRIM1-202ENST00000413985 M0R296 226 aa13.19□□□□□ -0.3
CRIM1-202ENST00000413985 KRT37O76014 449 aa13.19□□□□□ -0.3
CRIM1-202ENST00000413985 VCPP55072 806 aaKnown RBP13.19□□□□□ -0.3
CRIM1-202ENST00000413985 TCEAL5Q5H9L2 206 aa13.19□□□□□ -0.3
CRIM1-202ENST00000413985 FAM47CQ5HY64 1035 aa13.19□□□□□ -0.3
CRIM1-202ENST00000413985 TAPT1Q6NXT6 567 aa13.19□□□□□ -0.3
CRIM1-202ENST00000413985 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.19□□□□□ -0.3
CRIM1-202ENST00000413985 ASCL5Q7RTU5 278 aa13.19□□□□□ -0.3
CRIM1-202ENST00000413985 EDAQ92838 391 aa13.19□□□□□ -0.3
CRIM1-202ENST00000413985 ZNF512BQ96KM6 892 aaPredicted RBP13.19□□□□□ -0.3
CRIM1-202ENST00000413985 UPF3BQ9BZI7 483 aaKnown RBP13.19□□□□□ -0.3
CRIM1-202ENST00000413985 GOPCQ9HD26 462 aa13.19□□□□□ -0.3
CRIM1-202ENST00000413985 SWAP70Q9UH65 585 aa13.19□□□□□ -0.3
CRIM1-202ENST00000413985 HDAC5Q9UQL6 1122 aa13.19□□□□□ -0.3
CRIM1-202ENST00000413985 TRIP12Q14669 1992 aaPredicted RBP13.19□□□□□ -0.3
CRIM1-202ENST00000413985 BAZ2AQ9UIF9 1905 aaKnown RBP13.19□□□□□ -0.3
CRIM1-202ENST00000413985 ATG2AQ2TAZ0 1938 aa13.18□□□□□ -0.3
CRIM1-202ENST00000413985 PITPNM1O00562 1244 aa13.18□□□□□ -0.3
CRIM1-202ENST00000413985 GJB5O95377 273 aa13.18□□□□□ -0.3
CRIM1-202ENST00000413985 MYL3P08590 195 aa13.18□□□□□ -0.3
CRIM1-202ENST00000413985 CDK8P49336 464 aa13.18□□□□□ -0.3
CRIM1-202ENST00000413985 PURAQ00577 322 aaKnown RBP13.18□□□□□ -0.3
CRIM1-202ENST00000413985 NBPF20Q3BBV1 942 aa13.18□□□□□ -0.3
CRIM1-202ENST00000413985 BMP8AQ7Z5Y6 402 aa13.18□□□□□ -0.3
CRIM1-202ENST00000413985 LCORLQ8N3X6 602 aa13.18□□□□□ -0.3
CRIM1-202ENST00000413985 FAM133AQ8N9E0 248 aa13.18□□□□□ -0.3
CRIM1-202ENST00000413985 RETREG2Q8NC44 543 aa13.18□□□□□ -0.3
CRIM1-202ENST00000413985 FBXO22Q8NEZ5 403 aa13.18□□□□□ -0.3
CRIM1-202ENST00000413985 PABPC5Q96DU9 382 aaKnown RBP13.18□□□□□ -0.3
CRIM1-202ENST00000413985 MRPL38Q96DV4 380 aaKnown RBP13.18□□□□□ -0.3
CRIM1-202ENST00000413985 CCDC8Q9H0W5 538 aaPredicted RBP13.18□□□□□ -0.3
CRIM1-202ENST00000413985 MRS2Q9HD23 443 aa13.18□□□□□ -0.3
CRIM1-202ENST00000413985 ATP2A1O14983 1001 aa13.17□□□□□ -0.3
CRIM1-202ENST00000413985 PRKAB2O43741 272 aa13.17□□□□□ -0.3
CRIM1-202ENST00000413985 IGSF3O75054 1194 aa13.17□□□□□ -0.3
CRIM1-202ENST00000413985 LTBRP36941 435 aa13.17□□□□□ -0.3
CRIM1-202ENST00000413985 DLX2Q07687 328 aaPredicted RBP13.17□□□□□ -0.3
CRIM1-202ENST00000413985 TRIM67Q6ZTA4 783 aa13.17□□□□□ -0.3
CRIM1-202ENST00000413985 ATOH1Q92858 354 aaPredicted RBP13.17□□□□□ -0.3
CRIM1-202ENST00000413985 KIFC2Q96AC6 838 aa13.17□□□□□ -0.3
CRIM1-202ENST00000413985 RAD9AQ99638 391 aa13.17□□□□□ -0.3
CRIM1-202ENST00000413985 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.17□□□□□ -0.3
CRIM1-202ENST00000413985 CRNKL1Q9BZJ0 848 aaKnown RBP13.17□□□□□ -0.3
CRIM1-202ENST00000413985 CLDND1Q9NY35 253 aa13.17□□□□□ -0.3
CRIM1-202ENST00000413985 SCN10AQ9Y5Y9 1956 aa13.17□□□□□ -0.3
CRIM1-202ENST00000413985 LCTP09848 1927 aa13.17□□□□□ -0.3
CRIM1-202ENST00000413985 NDUFB10O96000 172 aa13.16□□□□□ -0.3
CRIM1-202ENST00000413985 COL19A1Q14993 1142 aa13.16□□□□□ -0.3
CRIM1-202ENST00000413985 ALDH1L2Q3SY69 923 aa13.16□□□□□ -0.3
CRIM1-202ENST00000413985 SLFNL1Q499Z3 407 aa13.16□□□□□ -0.3
CRIM1-202ENST00000413985 ERMP1Q7Z2K6 904 aa13.16□□□□□ -0.3
CRIM1-202ENST00000413985 RPAINQ86UA6 219 aa13.16□□□□□ -0.3
CRIM1-202ENST00000413985 SUGP1Q8IWZ8 645 aaKnown RBP13.16□□□□□ -0.3
CRIM1-202ENST00000413985 BANK1Q8NDB2 785 aa13.16□□□□□ -0.3
CRIM1-202ENST00000413985 PURBQ96QR8 312 aaKnown RBP13.16□□□□□ -0.3
CRIM1-202ENST00000413985 KANSL2Q9H9L4 492 aa13.16□□□□□ -0.3
CRIM1-202ENST00000413985 GPR108Q9NPR9 543 aa13.16□□□□□ -0.3
CRIM1-202ENST00000413985 A1CFQ9NQ94 594 aaKnown RBP13.16□□□□□ -0.3
CRIM1-202ENST00000413985 H0Y858 1186 aa13.15□□□□□ -0.3
CRIM1-202ENST00000413985 MBTPS2O43462 519 aa13.15□□□□□ -0.3
CRIM1-202ENST00000413985 NBNO60934 754 aa13.15□□□□□ -0.3
CRIM1-202ENST00000413985 ZBED4O75132 1171 aa13.15□□□□□ -0.3
CRIM1-202ENST00000413985 GNAI3P08754 354 aa13.15□□□□□ -0.3
CRIM1-202ENST00000413985 SMAD2Q15796 467 aaKnown RBP13.15□□□□□ -0.3
CRIM1-202ENST00000413985 TIGD5Q53EQ6 642 aa13.15□□□□□ -0.3
CRIM1-202ENST00000413985 IQSEC1Q6DN90 963 aa13.15□□□□□ -0.3
CRIM1-202ENST00000413985 KIAA1211Q6ZU35 1233 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms