RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 GRIA2P42262 883 aa5.77□□□□□ -1.49
HMGB1P11-201ENST00000413899 SEPHS1P49903 392 aa5.77□□□□□ -1.49
HMGB1P11-201ENST00000413899 HK2P52789 917 aa5.77□□□□□ -1.49
HMGB1P11-201ENST00000413899 RBM10P98175 930 aaKnown RBP5.77□□□□□ -1.49
HMGB1P11-201ENST00000413899 SCRN1Q12765 414 aa5.77□□□□□ -1.49
HMGB1P11-201ENST00000413899 C2orf27AQ580R0 203 aa5.77□□□□□ -1.49
HMGB1P11-201ENST00000413899 ACBD5Q5T8D3 534 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P11-201ENST00000413899 SLCO6A1Q86UG4 719 aa5.77□□□□□ -1.49
HMGB1P11-201ENST00000413899 SPPL2CQ8IUH8 684 aa5.77□□□□□ -1.49
HMGB1P11-201ENST00000413899 KSR1Q8IVT5 923 aa5.77□□□□□ -1.49
HMGB1P11-201ENST00000413899 OXR1Q8N573 874 aa5.77□□□□□ -1.49
HMGB1P11-201ENST00000413899 NPLOC4Q8TAT6 608 aa5.77□□□□□ -1.49
HMGB1P11-201ENST00000413899 FRS2Q8WU20 508 aa5.77□□□□□ -1.49
HMGB1P11-201ENST00000413899 OSBP2Q969R2 916 aa5.77□□□□□ -1.49
HMGB1P11-201ENST00000413899 C1orf159Q96HA4 380 aa5.77□□□□□ -1.49
HMGB1P11-201ENST00000413899 SLC26A8Q96RN1 970 aa5.77□□□□□ -1.49
HMGB1P11-201ENST00000413899 A0A1W2PQ45 241 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P11-201ENST00000413899 A0A1W2PQY0 241 aa5.76□□□□□ -1.49
HMGB1P11-201ENST00000413899 NOTOA8MTQ0 251 aa5.76□□□□□ -1.49
HMGB1P11-201ENST00000413899 DLX3O60479 287 aa5.76□□□□□ -1.49
HMGB1P11-201ENST00000413899 SNRPB2P08579 225 aaKnown RBP5.76□□□□□ -1.49
HMGB1P11-201ENST00000413899 FAM153BP0C7A2 387 aa5.76□□□□□ -1.49
HMGB1P11-201ENST00000413899 PABPC1P11940 636 aaKnown RBP5.76□□□□□ -1.49
HMGB1P11-201ENST00000413899 RAC2P15153 192 aa5.76□□□□□ -1.49
HMGB1P11-201ENST00000413899 ITGB5P18084 799 aa5.76□□□□□ -1.49
HMGB1P11-201ENST00000413899 AFMP43652 599 aa5.76□□□□□ -1.49
HMGB1P11-201ENST00000413899 SF1Q15637 639 aaKnown RBP5.76□□□□□ -1.49
HMGB1P11-201ENST00000413899 SLC35F1Q5T1Q4 408 aa5.76□□□□□ -1.49
HMGB1P11-201ENST00000413899 HLA-DQA1Q5Y7H0 255 aa5.76□□□□□ -1.49
HMGB1P11-201ENST00000413899 LILRA2Q8N149 483 aa5.76□□□□□ -1.49
HMGB1P11-201ENST00000413899 NAT16Q8N8M0 369 aa5.76□□□□□ -1.49
HMGB1P11-201ENST00000413899 TMEM145Q8NBT3 493 aa5.76□□□□□ -1.49
HMGB1P11-201ENST00000413899 KREMEN2Q8NCW0 462 aa5.76□□□□□ -1.49
HMGB1P11-201ENST00000413899 MMP19Q99542 508 aa5.76□□□□□ -1.49
HMGB1P11-201ENST00000413899 IER2Q9BTL4 223 aa5.76□□□□□ -1.49
HMGB1P11-201ENST00000413899 NRDCO43847 1150 aa5.75□□□□□ -1.49
HMGB1P11-201ENST00000413899 USP2O75604 605 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P11-201ENST00000413899 TBC1D8O95759 1140 aa5.75□□□□□ -1.49
HMGB1P11-201ENST00000413899 THBDP07204 575 aa5.75□□□□□ -1.49
HMGB1P11-201ENST00000413899 PAMP19021 973 aa5.75□□□□□ -1.49
HMGB1P11-201ENST00000413899 TMEM67Q5HYA8 995 aa5.75□□□□□ -1.49
HMGB1P11-201ENST00000413899 YOD1Q5VVQ6 348 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P11-201ENST00000413899 E4F1Q66K89 784 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P11-201ENST00000413899 IQCEQ6IPM2 695 aa5.75□□□□□ -1.49
HMGB1P11-201ENST00000413899 NSMFQ6X4W1 530 aa5.75□□□□□ -1.49
HMGB1P11-201ENST00000413899 SCUBE1Q8IWY4 988 aa5.75□□□□□ -1.49
HMGB1P11-201ENST00000413899 ZSWIM2Q8NEG5 633 aa5.75□□□□□ -1.49
HMGB1P11-201ENST00000413899 KCTD13Q8WZ19 329 aa5.75□□□□□ -1.49
HMGB1P11-201ENST00000413899 RNPC3Q96LT9 517 aaKnown RBP5.75□□□□□ -1.49
HMGB1P11-201ENST00000413899 CWC22Q9HCG8 908 aaKnown RBP5.75□□□□□ -1.49
HMGB1P11-201ENST00000413899 CCDC163A0A0D9SF12 145 aa5.74□□□□□ -1.49
HMGB1P11-201ENST00000413899 WTIPA6NIX2 430 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P11-201ENST00000413899 PRODHO43272 600 aa5.74□□□□□ -1.49
HMGB1P11-201ENST00000413899 PLS3P13797 630 aa5.74□□□□□ -1.49
HMGB1P11-201ENST00000413899 CORO7P57737 925 aa5.74□□□□□ -1.49
HMGB1P11-201ENST00000413899 RTP1P59025 263 aa5.74□□□□□ -1.49
HMGB1P11-201ENST00000413899 ERVFC1P60507 584 aa5.74□□□□□ -1.49
HMGB1P11-201ENST00000413899 KCNAB2Q13303 367 aa5.74□□□□□ -1.49
HMGB1P11-201ENST00000413899 SNX17Q15036 470 aa5.74□□□□□ -1.49
HMGB1P11-201ENST00000413899 FOXB2Q5VYV0 432 aa5.74□□□□□ -1.49
HMGB1P11-201ENST00000413899 DENND5AQ6IQ26 1287 aa5.74□□□□□ -1.49
HMGB1P11-201ENST00000413899 NLGN2Q8NFZ4 835 aa5.74□□□□□ -1.49
HMGB1P11-201ENST00000413899 SH3TC2Q8TF17 1288 aa5.74□□□□□ -1.49
HMGB1P11-201ENST00000413899 MYLIPQ8WY64 445 aa5.74□□□□□ -1.49
HMGB1P11-201ENST00000413899 KISS1RQ969F8 398 aaPredicted RBP5.74□□□□□ -1.49
HMGB1P11-201ENST00000413899 EXOC2Q96KP1 924 aa5.74□□□□□ -1.49
HMGB1P11-201ENST00000413899 GPRC5CQ9NQ84 441 aa5.74□□□□□ -1.49
HMGB1P11-201ENST00000413899 TBX22Q9Y458 520 aa5.74□□□□□ -1.49
HMGB1P11-201ENST00000413899 NPFFR2Q9Y5X5 522 aa5.74□□□□□ -1.49
HMGB1P11-201ENST00000413899 PTCH2Q9Y6C5 1203 aa5.74□□□□□ -1.49
HMGB1P11-201ENST00000413899 TRBV23-1A0A0A0MS06 115 aa5.73□□□□□ -1.49
HMGB1P11-201ENST00000413899 NPHP3-ACAD11A0A0J9YXS1 232 aa5.73□□□□□ -1.49
HMGB1P11-201ENST00000413899 ARNTLO00327 626 aa5.73□□□□□ -1.49
HMGB1P11-201ENST00000413899 BIN1O00499 593 aa5.73□□□□□ -1.49
HMGB1P11-201ENST00000413899 LTBRP36941 435 aa5.73□□□□□ -1.49
HMGB1P11-201ENST00000413899 ECI1P42126 302 aa5.73□□□□□ -1.49
HMGB1P11-201ENST00000413899 KCNJ6P48051 423 aa5.73□□□□□ -1.49
HMGB1P11-201ENST00000413899 SLC14A2Q15849 920 aa5.73□□□□□ -1.49
HMGB1P11-201ENST00000413899 PRSS53Q2L4Q9 553 aa5.73□□□□□ -1.49
HMGB1P11-201ENST00000413899 HSF5Q4G112 596 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P11-201ENST00000413899 GALNT18Q6P9A2 607 aa5.73□□□□□ -1.49
HMGB1P11-201ENST00000413899 CEP128Q6ZU80 1094 aa5.73□□□□□ -1.49
HMGB1P11-201ENST00000413899 NLRX1Q86UT6 975 aa5.73□□□□□ -1.49
HMGB1P11-201ENST00000413899 JAZF1Q86VZ6 243 aa5.73□□□□□ -1.49
HMGB1P11-201ENST00000413899 SHISA4Q96DD7 197 aa5.73□□□□□ -1.49
HMGB1P11-201ENST00000413899 ASIC4Q96FT7 647 aa5.73□□□□□ -1.49
HMGB1P11-201ENST00000413899 JMJD8Q96S16 334 aa5.73□□□□□ -1.49
HMGB1P11-201ENST00000413899 DHRS4Q9BTZ2 278 aa5.73□□□□□ -1.49
HMGB1P11-201ENST00000413899 TMEM260Q9NX78 707 aa5.73□□□□□ -1.49
HMGB1P11-201ENST00000413899 CLEC1BQ9P126 229 aa5.73□□□□□ -1.49
HMGB1P11-201ENST00000413899 ACSL6Q9UKU0 697 aa5.73□□□□□ -1.49
HMGB1P11-201ENST00000413899 MEFVO15553 781 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P11-201ENST00000413899 PAPLNO95428 1278 aa5.72□□□□□ -1.49
HMGB1P11-201ENST00000413899 JUNBP17275 347 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P11-201ENST00000413899 L1CAMP32004 1257 aa5.72□□□□□ -1.49
HMGB1P11-201ENST00000413899 IRAK1P51617 712 aa5.72□□□□□ -1.49
HMGB1P11-201ENST00000413899 SUMO1P63165 101 aaKnown RBP5.72□□□□□ -1.49
HMGB1P11-201ENST00000413899 SQSTM1Q13501 440 aa5.72□□□□□ -1.49
HMGB1P11-201ENST00000413899 NTRK3Q16288 839 aa5.72□□□□□ -1.49
HMGB1P11-201ENST00000413899 TIGD5Q53EQ6 642 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms