RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 TCTN2Q96GX1 697 aa6.56□□□□□ -1.36
HMGB3P31-201ENST00000413333 FCRL3Q96P31 734 aaPredicted RBP6.56□□□□□ -1.36
HMGB3P31-201ENST00000413333 TYW1Q9NV66 732 aaKnown RBP6.56□□□□□ -1.36
HMGB3P31-201ENST00000413333 RNF112Q9ULX5 631 aa6.56□□□□□ -1.36
HMGB3P31-201ENST00000413333 RAXQ9Y2V3 346 aa6.56□□□□□ -1.36
HMGB3P31-201ENST00000413333 SSU72P8A0A1W2PR75 194 aa6.55□□□□□ -1.36
HMGB3P31-201ENST00000413333 TCRBV16S1A1N1A0A5B0 115 aa6.55□□□□□ -1.36
HMGB3P31-201ENST00000413333 FAM83GA6ND36 823 aa6.55□□□□□ -1.36
HMGB3P31-201ENST00000413333 IGF2BP3O00425 579 aaKnown RBP eCLIP6.55□□□□□ -1.36
HMGB3P31-201ENST00000413333 AQP7O14520 342 aa6.55□□□□□ -1.36
HMGB3P31-201ENST00000413333 MEFVO15553 781 aaPredicted RBP6.55□□□□□ -1.36
HMGB3P31-201ENST00000413333 GSTM1P09488 218 aa6.55□□□□□ -1.36
HMGB3P31-201ENST00000413333 CPEP16870 476 aa6.55□□□□□ -1.36
HMGB3P31-201ENST00000413333 SEPHS1P49903 392 aa6.55□□□□□ -1.36
HMGB3P31-201ENST00000413333 BRDTQ58F21 947 aaPredicted RBP6.55□□□□□ -1.36
HMGB3P31-201ENST00000413333 DUSP27Q5VZP5 1158 aa6.55□□□□□ -1.36
HMGB3P31-201ENST00000413333 C22orf34Q6ZV56 151 aa6.55□□□□□ -1.36
HMGB3P31-201ENST00000413333 ALYREFQ86V81 257 aaKnown RBP6.55□□□□□ -1.36
HMGB3P31-201ENST00000413333 AFAP1L2Q8N4X5 818 aa6.55□□□□□ -1.36
HMGB3P31-201ENST00000413333 ZNF655Q8N720 491 aaPredicted RBP6.55□□□□□ -1.36
HMGB3P31-201ENST00000413333 FRS2Q8WU20 508 aa6.55□□□□□ -1.36
HMGB3P31-201ENST00000413333 PHF20Q9BVI0 1012 aa6.55□□□□□ -1.36
HMGB3P31-201ENST00000413333 SSBP4Q9BWG4 385 aaPredicted RBP6.55□□□□□ -1.36
HMGB3P31-201ENST00000413333 GPATCH2Q9NW75 528 aa6.55□□□□□ -1.36
HMGB3P31-201ENST00000413333 ST14Q9Y5Y6 855 aa6.55□□□□□ -1.36
HMGB3P31-201ENST00000413333 WASH4PA8MWX3 477 aa6.54□□□□□ -1.36
HMGB3P31-201ENST00000413333 ALG1L2C9J202 215 aa6.54□□□□□ -1.36
HMGB3P31-201ENST00000413333 VAV1P15498 845 aa6.54□□□□□ -1.36
HMGB3P31-201ENST00000413333 GUCY2FP51841 1108 aa6.54□□□□□ -1.36
HMGB3P31-201ENST00000413333 ODR4Q5SWX8 454 aa6.54□□□□□ -1.36
HMGB3P31-201ENST00000413333 PIK3R6Q5UE93 754 aa6.54□□□□□ -1.36
HMGB3P31-201ENST00000413333 CDCA2Q69YH5 1023 aaPredicted RBP6.54□□□□□ -1.36
HMGB3P31-201ENST00000413333 STYK1Q6J9G0 422 aa6.54□□□□□ -1.36
HMGB3P31-201ENST00000413333 KSR1Q8IVT5 923 aa6.54□□□□□ -1.36
HMGB3P31-201ENST00000413333 JDP2Q8WYK2 163 aa6.54□□□□□ -1.36
HMGB3P31-201ENST00000413333 COPS5Q92905 334 aa6.54□□□□□ -1.36
HMGB3P31-201ENST00000413333 GPR62Q9BZJ7 368 aa6.54□□□□□ -1.36
HMGB3P31-201ENST00000413333 MTFR1LQ9H019 292 aa6.54□□□□□ -1.36
HMGB3P31-201ENST00000413333 DUSP15Q9H1R2 295 aaPredicted RBP6.54□□□□□ -1.36
HMGB3P31-201ENST00000413333 TRIT1Q9H3H1 467 aaKnown RBP6.54□□□□□ -1.36
HMGB3P31-201ENST00000413333 CLEC1BQ9P126 229 aa6.54□□□□□ -1.36
HMGB3P31-201ENST00000413333 ZSWIM5Q9P217 1185 aa6.54□□□□□ -1.36
HMGB3P31-201ENST00000413333 TMEFF2Q9UIK5 374 aaPredicted RBP6.54□□□□□ -1.36
HMGB3P31-201ENST00000413333 PCDHA8Q9Y5H6 950 aa6.54□□□□□ -1.36
HMGB3P31-201ENST00000413333 C1QTNF9BB2RNN3 333 aa6.53□□□□□ -1.36
HMGB3P31-201ENST00000413333 F13BP05160 661 aa6.53□□□□□ -1.36
HMGB3P31-201ENST00000413333 SYPP08247 313 aa6.53□□□□□ -1.36
HMGB3P31-201ENST00000413333 PLS3P13797 630 aa6.53□□□□□ -1.36
HMGB3P31-201ENST00000413333 BMP8BP34820 402 aa6.53□□□□□ -1.36
HMGB3P31-201ENST00000413333 INSM1Q01101 510 aaPredicted RBP6.53□□□□□ -1.36
HMGB3P31-201ENST00000413333 EXOSC10Q01780 885 aaKnown RBP6.53□□□□□ -1.36
HMGB3P31-201ENST00000413333 CYP27A1Q02318 531 aa6.53□□□□□ -1.36
HMGB3P31-201ENST00000413333 SEPT7Q16181 437 aaKnown RBP6.53□□□□□ -1.36
HMGB3P31-201ENST00000413333 CD163Q86VB7 1156 aa6.53□□□□□ -1.36
HMGB3P31-201ENST00000413333 IFNL3Q8IZI9 196 aa6.53□□□□□ -1.36
HMGB3P31-201ENST00000413333 FAM181AQ8N9Y4 354 aa6.53□□□□□ -1.36
HMGB3P31-201ENST00000413333 NPLOC4Q8TAT6 608 aa6.53□□□□□ -1.36
HMGB3P31-201ENST00000413333 WNK4Q96J92 1243 aa6.53□□□□□ -1.36
HMGB3P31-201ENST00000413333 SLC12A9Q9BXP2 914 aa6.53□□□□□ -1.36
HMGB3P31-201ENST00000413333 CHPF2Q9P2E5 772 aa6.53□□□□□ -1.36
HMGB3P31-201ENST00000413333 B4E1Z4 1266 aa6.52□□□□□ -1.37
HMGB3P31-201ENST00000413333 H3BS24 57 aa6.52□□□□□ -1.37
HMGB3P31-201ENST00000413333 FKTNO75072 461 aa6.52□□□□□ -1.37
HMGB3P31-201ENST00000413333 EYA4O95677 639 aa6.52□□□□□ -1.37
HMGB3P31-201ENST00000413333 SRFP11831 508 aa6.52□□□□□ -1.37
HMGB3P31-201ENST00000413333 LCP1P13796 627 aa6.52□□□□□ -1.37
HMGB3P31-201ENST00000413333 NAT1P18440 290 aa6.52□□□□□ -1.37
HMGB3P31-201ENST00000413333 POU3F2P20265 443 aaPredicted RBP6.52□□□□□ -1.37
HMGB3P31-201ENST00000413333 TPP2P29144 1249 aaPredicted RBP6.52□□□□□ -1.37
HMGB3P31-201ENST00000413333 GATA4P43694 442 aa6.52□□□□□ -1.37
HMGB3P31-201ENST00000413333 ZC3H7AQ8IWR0 971 aaKnown RBP6.52□□□□□ -1.37
HMGB3P31-201ENST00000413333 WDR66Q8TBY9 1149 aa6.52□□□□□ -1.37
HMGB3P31-201ENST00000413333 DIO2Q92813 273 aa6.52□□□□□ -1.37
HMGB3P31-201ENST00000413333 USP7Q93009 1102 aa6.52□□□□□ -1.37
HMGB3P31-201ENST00000413333 FOXP3Q9BZS1 431 aa6.52□□□□□ -1.37
HMGB3P31-201ENST00000413333 LRRC4CQ9HCJ2 640 aa6.52□□□□□ -1.37
HMGB3P31-201ENST00000413333 SAMD15Q9P1V8 674 aa6.52□□□□□ -1.37
HMGB3P31-201ENST00000413333 WASHC2CQ9Y4E1 1318 aa6.51□□□□□ -1.37
HMGB3P31-201ENST00000413333 ARNTLO00327 626 aa6.51□□□□□ -1.37
HMGB3P31-201ENST00000413333 MSCO60682 206 aa6.51□□□□□ -1.37
HMGB3P31-201ENST00000413333 KATNA1O75449 491 aa6.51□□□□□ -1.37
HMGB3P31-201ENST00000413333 NPTXRO95502 500 aa6.51□□□□□ -1.37
HMGB3P31-201ENST00000413333 SRGAP2CP0DJJ0 459 aa6.51□□□□□ -1.37
HMGB3P31-201ENST00000413333 PMLP29590 882 aa6.51□□□□□ -1.37
HMGB3P31-201ENST00000413333 LTBRP36941 435 aa6.51□□□□□ -1.37
HMGB3P31-201ENST00000413333 OXCT1P55809 520 aa6.51□□□□□ -1.37
HMGB3P31-201ENST00000413333 PCBP3P57721 371 aaKnown RBP6.51□□□□□ -1.37
HMGB3P31-201ENST00000413333 GPR85P60893 370 aa6.51□□□□□ -1.37
HMGB3P31-201ENST00000413333 ACBD5Q5T8D3 534 aaPredicted RBP6.51□□□□□ -1.37
HMGB3P31-201ENST00000413333 ZCCHC8Q6NZY4 707 aaKnown RBP6.51□□□□□ -1.37
HMGB3P31-201ENST00000413333 PRR23CQ6ZRP0 262 aa6.51□□□□□ -1.37
HMGB3P31-201ENST00000413333 LHFPL2Q6ZUX7 228 aa6.51□□□□□ -1.37
HMGB3P31-201ENST00000413333 DDX53Q86TM3 631 aaKnown RBP6.51□□□□□ -1.37
HMGB3P31-201ENST00000413333 TSPYL5Q86VY4 417 aaPredicted RBP6.51□□□□□ -1.37
HMGB3P31-201ENST00000413333 CCDC103Q8IW40 242 aa6.51□□□□□ -1.37
HMGB3P31-201ENST00000413333 USHBP1Q8N6Y0 703 aa6.51□□□□□ -1.37
HMGB3P31-201ENST00000413333 UBE2FQ969M7 185 aa6.51□□□□□ -1.37
HMGB3P31-201ENST00000413333 HSPA12BQ96MM6 686 aa6.51□□□□□ -1.37
HMGB3P31-201ENST00000413333 CDADC1Q9BWV3 514 aa6.51□□□□□ -1.37
HMGB3P31-201ENST00000413333 OSBPL1AQ9BXW6 950 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms