RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 ORC2Q13416 577 aaPredicted RBP9.53□□□□□ -0.88
SYNE1-211ENST00000413186 NBPF9Q3BBW0 867 aa9.53□□□□□ -0.88
SYNE1-211ENST00000413186 TBCKQ8TEA7 893 aa9.53□□□□□ -0.88
SYNE1-211ENST00000413186 ELP3Q9H9T3 547 aa9.53□□□□□ -0.88
SYNE1-211ENST00000413186 ZNF202O95125 648 aa9.53□□□□□ -0.88
SYNE1-211ENST00000413186 KRT13P13646 458 aa9.53□□□□□ -0.88
SYNE1-211ENST00000413186 SFPQP23246 707 aaKnown RBP eCLIP9.53□□□□□ -0.88
SYNE1-211ENST00000413186 RPL13P26373 211 aaKnown RBP9.53□□□□□ -0.88
SYNE1-211ENST00000413186 CCND2P30279 289 aa9.53□□□□□ -0.88
SYNE1-211ENST00000413186 HMGCS2P54868 508 aa9.53□□□□□ -0.88
SYNE1-211ENST00000413186 RNF207Q6ZRF8 634 aa9.53□□□□□ -0.88
SYNE1-211ENST00000413186 TUBB4AP04350 444 aa9.53□□□□□ -0.88
SYNE1-211ENST00000413186 CLCN1P35523 988 aa9.53□□□□□ -0.88
SYNE1-211ENST00000413186 QRICH1Q2TAL8 776 aa9.53□□□□□ -0.88
SYNE1-211ENST00000413186 TCERG1LQ5VWI1 586 aa9.53□□□□□ -0.88
SYNE1-211ENST00000413186 ADGRA1Q86SQ6 560 aa9.53□□□□□ -0.88
SYNE1-211ENST00000413186 CCDC112Q8NEF3 446 aa9.53□□□□□ -0.88
SYNE1-211ENST00000413186 PLIN2Q99541 437 aa9.53□□□□□ -0.88
SYNE1-211ENST00000413186 GPRC5DQ9NZD1 345 aa9.53□□□□□ -0.88
SYNE1-211ENST00000413186 MKL2Q9ULH7 1088 aa9.53□□□□□ -0.88
SYNE1-211ENST00000413186 A0A1W2PQ27 194 aa9.53□□□□□ -0.88
SYNE1-211ENST00000413186 A0A1W2PQ64 194 aa9.53□□□□□ -0.88
SYNE1-211ENST00000413186 A0A1W2PQD8 194 aa9.53□□□□□ -0.88
SYNE1-211ENST00000413186 DDX39AO00148 427 aaKnown RBP9.53□□□□□ -0.88
SYNE1-211ENST00000413186 DTNBO60941 627 aa9.53□□□□□ -0.88
SYNE1-211ENST00000413186 POTEJP0CG39 1038 aa9.53□□□□□ -0.88
SYNE1-211ENST00000413186 DNM2P50570 870 aa9.53□□□□□ -0.88
SYNE1-211ENST00000413186 ANO3Q9BYT9 981 aa9.53□□□□□ -0.88
SYNE1-211ENST00000413186 RPAP3Q9H6T3 665 aaPredicted RBP9.53□□□□□ -0.88
SYNE1-211ENST00000413186 SUDS3Q9H7L9 328 aaPredicted RBP9.53□□□□□ -0.88
SYNE1-211ENST00000413186 MAGEF1Q9HAY2 307 aa9.53□□□□□ -0.88
SYNE1-211ENST00000413186 BARHL2Q9NY43 387 aa9.53□□□□□ -0.88
SYNE1-211ENST00000413186 RGS17Q9UGC6 210 aaPredicted RBP9.53□□□□□ -0.88
SYNE1-211ENST00000413186 MTMR2Q13614 643 aa9.52□□□□□ -0.89
SYNE1-211ENST00000413186 TKFCQ3LXA3 575 aa9.52□□□□□ -0.89
SYNE1-211ENST00000413186 ADGRF4Q8IZF3 695 aa9.52□□□□□ -0.89
SYNE1-211ENST00000413186 MB21D1Q8N884 522 aa9.52□□□□□ -0.89
SYNE1-211ENST00000413186 GLG1Q92896 1179 aa9.52□□□□□ -0.89
SYNE1-211ENST00000413186 IL25Q9H293 177 aa9.52□□□□□ -0.89
SYNE1-211ENST00000413186 CLSTN2Q9H4D0 955 aa9.52□□□□□ -0.89
SYNE1-211ENST00000413186 SEPT10Q9P0V9 454 aa9.52□□□□□ -0.89
SYNE1-211ENST00000413186 LAMB4A4D0S4 1761 aa9.52□□□□□ -0.89
SYNE1-211ENST00000413186 ZSCAN12O43309 604 aa9.52□□□□□ -0.89
SYNE1-211ENST00000413186 ADCY5O95622 1261 aa9.52□□□□□ -0.89
SYNE1-211ENST00000413186 CDR1P51861 262 aa9.52□□□□□ -0.89
SYNE1-211ENST00000413186 ANTXR2P58335 489 aa9.52□□□□□ -0.89
SYNE1-211ENST00000413186 TYRO3Q06418 890 aa9.52□□□□□ -0.89
SYNE1-211ENST00000413186 ODF2Q5BJF6 829 aa9.52□□□□□ -0.89
SYNE1-211ENST00000413186 ISM2Q6H9L7 571 aa9.52□□□□□ -0.89
SYNE1-211ENST00000413186 SNRNP48Q6IEG0 339 aaKnown RBP9.52□□□□□ -0.89
SYNE1-211ENST00000413186 CACNA2D4Q7Z3S7 1137 aa9.52□□□□□ -0.89
SYNE1-211ENST00000413186 CUEDC2Q9H467 287 aa9.52□□□□□ -0.89
SYNE1-211ENST00000413186 RNF146Q9NTX7 359 aa9.52□□□□□ -0.89
SYNE1-211ENST00000413186 NOD1Q9Y239 953 aa9.52□□□□□ -0.89
SYNE1-211ENST00000413186 CDC27P30260 824 aa9.52□□□□□ -0.89
SYNE1-211ENST00000413186 STAT3P40763 770 aa9.52□□□□□ -0.89
SYNE1-211ENST00000413186 MKRN3Q13064 507 aaKnown RBP9.52□□□□□ -0.89
SYNE1-211ENST00000413186 AMIGO3Q86WK7 504 aa9.52□□□□□ -0.89
SYNE1-211ENST00000413186 ERO1BQ86YB8 467 aa9.52□□□□□ -0.89
SYNE1-211ENST00000413186 LMBRD1Q9NUN5 540 aa9.52□□□□□ -0.89
SYNE1-211ENST00000413186 MRVI1Q9Y6F6 885 aa9.52□□□□□ -0.89
SYNE1-211ENST00000413186 CETPP11597 493 aa9.51□□□□□ -0.89
SYNE1-211ENST00000413186 LRCH2Q5VUJ6 765 aa9.51□□□□□ -0.89
SYNE1-211ENST00000413186 FAM160B1Q5W0V3 765 aa9.51□□□□□ -0.89
SYNE1-211ENST00000413186 ARL6IP4Q66PJ3 421 aaKnown RBP9.51□□□□□ -0.89
SYNE1-211ENST00000413186 FILIP1Q7Z7B0 1213 aa9.51□□□□□ -0.89
SYNE1-211ENST00000413186 VPS36Q86VN1 386 aa9.51□□□□□ -0.89
SYNE1-211ENST00000413186 CNKSR2Q8WXI2 1034 aa9.51□□□□□ -0.89
SYNE1-211ENST00000413186 ACAD9Q9H845 621 aa9.51□□□□□ -0.89
SYNE1-211ENST00000413186 EXOC7Q9UPT5 735 aa9.51□□□□□ -0.89
SYNE1-211ENST00000413186 TMCO5BA8MYB1 307 aa9.51□□□□□ -0.89
SYNE1-211ENST00000413186 TECP42680 631 aa9.51□□□□□ -0.89
SYNE1-211ENST00000413186 ANO6Q4KMQ2 910 aa9.51□□□□□ -0.89
SYNE1-211ENST00000413186 RCOR1Q9UKL0 485 aa9.51□□□□□ -0.89
SYNE1-211ENST00000413186 PDHBP11177 359 aa9.51□□□□□ -0.89
SYNE1-211ENST00000413186 HUNKP57058 714 aa9.51□□□□□ -0.89
SYNE1-211ENST00000413186 NR5A1Q13285 461 aa9.51□□□□□ -0.89
SYNE1-211ENST00000413186 TPH2Q8IWU9 490 aa9.51□□□□□ -0.89
SYNE1-211ENST00000413186 CERS5Q8N5B7 392 aa9.51□□□□□ -0.89
SYNE1-211ENST00000413186 RASGRP4Q8TDF6 673 aa9.51□□□□□ -0.89
SYNE1-211ENST00000413186 ERCC4Q92889 916 aaPredicted RBP9.51□□□□□ -0.89
SYNE1-211ENST00000413186 ATP6V0A1Q93050 837 aa9.51□□□□□ -0.89
SYNE1-211ENST00000413186 NUP88Q99567 741 aaPredicted RBP9.51□□□□□ -0.89
SYNE1-211ENST00000413186 KIF2CQ99661 725 aa9.51□□□□□ -0.89
SYNE1-211ENST00000413186 ZNF577Q9BSK1 485 aa9.51□□□□□ -0.89
SYNE1-211ENST00000413186 TEX13BQ9BXU2 312 aa9.51□□□□□ -0.89
SYNE1-211ENST00000413186 DDTLA6NHG4 134 aaPredicted RBP9.51□□□□□ -0.89
SYNE1-211ENST00000413186 WTIPA6NIX2 430 aaPredicted RBP9.51□□□□□ -0.89
SYNE1-211ENST00000413186 CELF2O95319 508 aaKnown RBP9.51□□□□□ -0.89
SYNE1-211ENST00000413186 RESTQ13127 1097 aa9.51□□□□□ -0.89
SYNE1-211ENST00000413186 PDCL2Q8N4E4 241 aa9.51□□□□□ -0.89
SYNE1-211ENST00000413186 MLKLQ8NB16 471 aa9.51□□□□□ -0.89
SYNE1-211ENST00000413186 NSUN6Q8TEA1 469 aaKnown RBP9.51□□□□□ -0.89
SYNE1-211ENST00000413186 ZC3H15Q8WU90 426 aaKnown RBP9.51□□□□□ -0.89
SYNE1-211ENST00000413186 IWS1Q96ST2 819 aa9.51□□□□□ -0.89
SYNE1-211ENST00000413186 RAVER2Q9HCJ3 691 aaKnown RBP9.51□□□□□ -0.89
SYNE1-211ENST00000413186 NRBP2Q9NSY0 501 aa9.51□□□□□ -0.89
SYNE1-211ENST00000413186 N4BP3O15049 544 aa9.5□□□□□ -0.89
SYNE1-211ENST00000413186 AIFM3Q96NN9 605 aa9.5□□□□□ -0.89
SYNE1-211ENST00000413186 TRERF1Q96PN7 1200 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms